RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 C8orf76Q96K31 380 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 KCNH7Q9NS40 1196 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 TBC1D22BQ9NU19 505 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 TMEM260Q9NX78 707 aa11.85□□□□□ -0.51
TOP3A-212ENST00000582122 ZNF215Q9UL58 517 aaPredicted RBP11.85□□□□□ -0.51
TOP3A-212ENST00000582122 CYP3A7-CYP3A51PA0A087WV96 503 aa11.84□□□□□ -0.51
TOP3A-212ENST00000582122 M0R2N6 131 aa11.84□□□□□ -0.51
TOP3A-212ENST00000582122 MMP1P03956 469 aa11.84□□□□□ -0.51
TOP3A-212ENST00000582122 CYP3A7P24462 503 aa11.84□□□□□ -0.51
TOP3A-212ENST00000582122 ATN1P54259 1190 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-212ENST00000582122 RTP1P59025 263 aa11.84□□□□□ -0.51
TOP3A-212ENST00000582122 ITGA7Q13683 1181 aa11.84□□□□□ -0.51
TOP3A-212ENST00000582122 LRRC26Q2I0M4 334 aa11.84□□□□□ -0.51
TOP3A-212ENST00000582122 PLA2G4DQ86XP0 818 aa11.84□□□□□ -0.51
TOP3A-212ENST00000582122 SLC43A3Q8NBI5 491 aa11.84□□□□□ -0.51
TOP3A-212ENST00000582122 TBCKQ8TEA7 893 aa11.84□□□□□ -0.51
TOP3A-212ENST00000582122 COPS5Q92905 334 aa11.84□□□□□ -0.51
TOP3A-212ENST00000582122 JPH1Q9HDC5 661 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-212ENST00000582122 A0A0C4DFX4 3053 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 IPO5O00410 1097 aaKnown RBP11.83□□□□□ -0.52
TOP3A-212ENST00000582122 JAK2O60674 1132 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 KCNA2P16389 499 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 CDK7P50613 346 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 SP2Q02086 613 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 SEMA3FQ13275 785 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 GNL2Q13823 731 aaKnown RBP11.83□□□□□ -0.52
TOP3A-212ENST00000582122 Q4G0T1 1027 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 PPP4R3AQ6IN85 833 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 CYFIP1Q7L576 1253 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 FBXO18Q8NFZ0 1043 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 SEPT1Q8WYJ6 367 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 PGBD1Q96JS3 809 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 AIFM3Q96NN9 605 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 RIT2Q99578 217 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 GDF15Q99988 308 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 FOXP1Q9H334 677 aaPredicted RBP11.83□□□□□ -0.52
TOP3A-212ENST00000582122 AGO4Q9HCK5 861 aaKnown RBP11.83□□□□□ -0.52
TOP3A-212ENST00000582122 SLC9A2Q9UBY0 812 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 KCNJ14Q9UNX9 436 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 SMC3Q9UQE7 1217 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 ATP11BQ9Y2G3 1177 aa11.83□□□□□ -0.52
TOP3A-212ENST00000582122 F2P00734 622 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 GNAT1P11488 350 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 PDIA4P13667 645 aaKnown RBP11.82□□□□□ -0.52
TOP3A-212ENST00000582122 PDCP20941 246 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 SLC26A2P50443 739 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 KRT76Q01546 638 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 TLE2Q04725 743 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 ST3GAL1Q11201 340 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 ORC2Q13416 577 aaPredicted RBP11.82□□□□□ -0.52
TOP3A-212ENST00000582122 NPY5RQ15761 445 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 HSDL1Q3SXM5 330 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 LRIT3Q3SXY7 679 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 TRIM60Q495X7 471 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 PRR16Q569H4 304 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 TMEM63BQ5T3F8 832 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 KRT40Q6A162 431 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 NEK8Q86SG6 692 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 SESTD1Q86VW0 696 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 SMAP1Q8IYB5 467 aaPredicted RBP11.82□□□□□ -0.52
TOP3A-212ENST00000582122 DIS3L2Q8IYB7 885 aaKnown RBP11.82□□□□□ -0.52
TOP3A-212ENST00000582122 C7orf61Q8IZ16 206 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 RASGRP4Q8TDF6 673 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 SNX21Q969T3 373 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 FAM20AQ96MK3 541 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 GPR20Q99678 358 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 LBHD1Q9BQE6 289 aaPredicted RBP11.82□□□□□ -0.52
TOP3A-212ENST00000582122 ZNF577Q9BSK1 485 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 AZI2Q9H6S1 392 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 STXBP5LQ9Y2K9 1186 aa11.82□□□□□ -0.52
TOP3A-212ENST00000582122 IGLV3-22A0A075B6J6 115 aa11.81□□□□□ -0.52
TOP3A-212ENST00000582122 FAM86B1E9PN63 330 aa11.81□□□□□ -0.52
TOP3A-212ENST00000582122 TBX3O15119 743 aa11.81□□□□□ -0.52
TOP3A-212ENST00000582122 PQBP1O60828 265 aaKnown RBP11.81□□□□□ -0.52
TOP3A-212ENST00000582122 CLTBP09497 229 aa11.81□□□□□ -0.52
TOP3A-212ENST00000582122 FAM86B2P0C5J1 330 aa11.81□□□□□ -0.52
TOP3A-212ENST00000582122 CUL4AQ13619 759 aa11.81□□□□□ -0.52
TOP3A-212ENST00000582122 ZNF746Q6NUN9 644 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-212ENST00000582122 PIK3AP1Q6ZUJ8 805 aa11.81□□□□□ -0.52
TOP3A-212ENST00000582122 DEFB123Q8N688 67 aa11.81□□□□□ -0.52
TOP3A-212ENST00000582122 C7orf31Q8N865 590 aa11.81□□□□□ -0.52
TOP3A-212ENST00000582122 RDM1Q8NG50 284 aa11.81□□□□□ -0.52
TOP3A-212ENST00000582122 INTS4Q96HW7 963 aaKnown RBP11.81□□□□□ -0.52
TOP3A-212ENST00000582122 SMARCAD1Q9H4L7 1026 aa11.81□□□□□ -0.52
TOP3A-212ENST00000582122 MYH7BA7E2Y1 1941 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 SCN10AQ9Y5Y9 1956 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 H3BRB1 525 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 K7ELQ4 463 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-212ENST00000582122 GAS7O60861 476 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 ATP9AO75110 1047 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 BAG4O95429 457 aaKnown RBP11.8□□□□□ -0.52
TOP3A-212ENST00000582122 LGALS2P05162 132 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 RPLP2P05387 115 aaKnown RBP11.8□□□□□ -0.52
TOP3A-212ENST00000582122 ARP10275 920 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 SFNP31947 248 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 TRAPPC10P48553 1259 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 PSEN2P49810 448 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 MFSD10Q14728 455 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 INF2Q27J81 1249 aa11.8□□□□□ -0.52
TOP3A-212ENST00000582122 LETM2Q2VYF4 491 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms