RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 STRIP2Q9ULQ0 834 aa6.18□□□□□ -1.42
TTC39C-207ENST00000581394 CNOT4O95628 575 aaKnown RBP6.17□□□□□ -1.42
TTC39C-207ENST00000581394 VAMP1P23763 118 aa6.17□□□□□ -1.42
TTC39C-207ENST00000581394 LTBRP36941 435 aa6.17□□□□□ -1.42
TTC39C-207ENST00000581394 CYP4F22Q6NT55 531 aa6.17□□□□□ -1.42
TTC39C-207ENST00000581394 PROSER1Q86XN7 944 aa6.17□□□□□ -1.42
TTC39C-207ENST00000581394 NUDT10Q8NFP7 164 aa6.17□□□□□ -1.42
TTC39C-207ENST00000581394 NUDT11Q96G61 164 aa6.17□□□□□ -1.42
TTC39C-207ENST00000581394 CCDC140Q96MF4 163 aa6.17□□□□□ -1.42
TTC39C-207ENST00000581394 EPB41L1Q9H4G0 881 aa6.17□□□□□ -1.42
TTC39C-207ENST00000581394 ING1Q9UK53 422 aaPredicted RBP6.17□□□□□ -1.42
TTC39C-207ENST00000581394 TBX1O43435 398 aa6.16□□□□□ -1.42
TTC39C-207ENST00000581394 MAFKO60675 156 aa6.16□□□□□ -1.42
TTC39C-207ENST00000581394 DGKIO75912 1065 aa6.16□□□□□ -1.42
TTC39C-207ENST00000581394 KLHL18O94889 574 aa6.16□□□□□ -1.42
TTC39C-207ENST00000581394 CHGBP05060 677 aa6.16□□□□□ -1.42
TTC39C-207ENST00000581394 ECI1P42126 302 aa6.16□□□□□ -1.42
TTC39C-207ENST00000581394 HS1BP3Q53T59 392 aa6.16□□□□□ -1.42
TTC39C-207ENST00000581394 TMC5Q6UXY8 1006 aa6.16□□□□□ -1.42
TTC39C-207ENST00000581394 ZNF227Q86WZ6 799 aa6.16□□□□□ -1.42
TTC39C-207ENST00000581394 PPIL6Q8IXY8 311 aa6.16□□□□□ -1.42
TTC39C-207ENST00000581394 TTLL11Q8NHH1 800 aa6.16□□□□□ -1.42
TTC39C-207ENST00000581394 DLL4Q9NR61 685 aa6.16□□□□□ -1.42
TTC39C-207ENST00000581394 ASH2LQ9UBL3 628 aa6.16□□□□□ -1.42
TTC39C-207ENST00000581394 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.16□□□□□ -1.42
TTC39C-207ENST00000581394 PCDHA2Q9Y5H9 948 aa6.16□□□□□ -1.42
TTC39C-207ENST00000581394 SLC4A7Q9Y6M7 1214 aa6.16□□□□□ -1.42
TTC39C-207ENST00000581394 ITGAVP06756 1048 aa6.15□□□□□ -1.42
TTC39C-207ENST00000581394 Q6ZUG5 572 aa6.15□□□□□ -1.42
TTC39C-207ENST00000581394 RALYLQ86SE5 291 aaKnown RBP6.15□□□□□ -1.42
TTC39C-207ENST00000581394 DTX3Q8N9I9 347 aa6.15□□□□□ -1.42
TTC39C-207ENST00000581394 AJUBAQ96IF1 538 aa6.15□□□□□ -1.42
TTC39C-207ENST00000581394 CLDND1Q9NY35 253 aa6.15□□□□□ -1.42
TTC39C-207ENST00000581394 LCP1P13796 627 aa6.14□□□□□ -1.43
TTC39C-207ENST00000581394 GFRA1P56159 465 aa6.14□□□□□ -1.43
TTC39C-207ENST00000581394 SMAD2Q15796 467 aaKnown RBP6.14□□□□□ -1.43
TTC39C-207ENST00000581394 PRSS53Q2L4Q9 553 aa6.14□□□□□ -1.43
TTC39C-207ENST00000581394 MIIPQ5JXC2 388 aa6.14□□□□□ -1.43
TTC39C-207ENST00000581394 CHAMP1Q96JM3 812 aa6.14□□□□□ -1.43
TTC39C-207ENST00000581394 CDIP1Q9H305 208 aa6.14□□□□□ -1.43
TTC39C-207ENST00000581394 RBPJLQ9UBG7 517 aa6.14□□□□□ -1.43
TTC39C-207ENST00000581394 NPFFR2Q9Y5X5 522 aa6.14□□□□□ -1.43
TTC39C-207ENST00000581394 FOXS1O43638 330 aa6.13□□□□□ -1.43
TTC39C-207ENST00000581394 PURAQ00577 322 aaKnown RBP6.13□□□□□ -1.43
TTC39C-207ENST00000581394 FOXE3Q13461 319 aa6.13□□□□□ -1.43
TTC39C-207ENST00000581394 PRKD1Q15139 912 aaPredicted RBP6.13□□□□□ -1.43
TTC39C-207ENST00000581394 SF1Q15637 639 aaKnown RBP6.13□□□□□ -1.43
TTC39C-207ENST00000581394 VASNQ6EMK4 673 aa6.13□□□□□ -1.43
TTC39C-207ENST00000581394 DENND5AQ6IQ26 1287 aa6.13□□□□□ -1.43
TTC39C-207ENST00000581394 TCTN3Q6NUS6 607 aa6.13□□□□□ -1.43
TTC39C-207ENST00000581394 TRIM48Q8IWZ4 208 aa6.13□□□□□ -1.43
TTC39C-207ENST00000581394 C1orf159Q96HA4 380 aa6.13□□□□□ -1.43
TTC39C-207ENST00000581394 ZNF341Q9BYN7 854 aa6.13□□□□□ -1.43
TTC39C-207ENST00000581394 KRIT1O00522 736 aa6.12□□□□□ -1.43
TTC39C-207ENST00000581394 KNG1P01042 644 aa6.12□□□□□ -1.43
TTC39C-207ENST00000581394 CSF2RBP32927 897 aa6.12□□□□□ -1.43
TTC39C-207ENST00000581394 TGFB2P61812 414 aa6.12□□□□□ -1.43
TTC39C-207ENST00000581394 SV2CQ496J9 727 aa6.12□□□□□ -1.43
TTC39C-207ENST00000581394 TMEM145Q8NBT3 493 aa6.12□□□□□ -1.43
TTC39C-207ENST00000581394 ZNF503Q96F45 646 aa6.12□□□□□ -1.43
TTC39C-207ENST00000581394 PDGFDQ9GZP0 370 aaPredicted RBP6.12□□□□□ -1.43
TTC39C-207ENST00000581394 SLC6A20Q9NP91 592 aa6.12□□□□□ -1.43
TTC39C-207ENST00000581394 LRP2BPQ9P2M1 347 aa6.12□□□□□ -1.43
TTC39C-207ENST00000581394 NPIPB8E9PQR5 432 aa6.11□□□□□ -1.43
TTC39C-207ENST00000581394 CAPNS1P04632 268 aa6.11□□□□□ -1.43
TTC39C-207ENST00000581394 KCNJ6P48051 423 aa6.11□□□□□ -1.43
TTC39C-207ENST00000581394 FHL2Q14192 279 aa6.11□□□□□ -1.43
TTC39C-207ENST00000581394 SLC35F1Q5T1Q4 408 aa6.11□□□□□ -1.43
TTC39C-207ENST00000581394 C6orf15Q6UXA7 325 aaPredicted RBP6.11□□□□□ -1.43
TTC39C-207ENST00000581394 RNF207Q6ZRF8 634 aa6.11□□□□□ -1.43
TTC39C-207ENST00000581394 NT5DC4Q86YG4 428 aa6.11□□□□□ -1.43
TTC39C-207ENST00000581394 REXO1L1PQ8IX06 675 aa6.11□□□□□ -1.43
TTC39C-207ENST00000581394 EDAQ92838 391 aa6.11□□□□□ -1.43
TTC39C-207ENST00000581394 ANAPC16Q96DE5 110 aa6.11□□□□□ -1.43
TTC39C-207ENST00000581394 GNRHR2Q96P88 292 aa6.11□□□□□ -1.43
TTC39C-207ENST00000581394 LMF1Q96S06 567 aa6.11□□□□□ -1.43
TTC39C-207ENST00000581394 ZFR2Q9UPR6 939 aaKnown RBP6.11□□□□□ -1.43
TTC39C-207ENST00000581394 SUSD5O60279 629 aa6.1□□□□□ -1.43
TTC39C-207ENST00000581394 FAM178BQ8IXR5 827 aa6.1□□□□□ -1.43
TTC39C-207ENST00000581394 IFNL2Q8IZJ0 200 aa6.1□□□□□ -1.43
TTC39C-207ENST00000581394 KATNBL1Q9H079 304 aa6.1□□□□□ -1.43
TTC39C-207ENST00000581394 KCND1Q9NSA2 647 aa6.1□□□□□ -1.43
TTC39C-207ENST00000581394 FAHP16930 419 aa6.09□□□□□ -1.43
TTC39C-207ENST00000581394 PHF19Q5T6S3 580 aa6.09□□□□□ -1.43
TTC39C-207ENST00000581394 AMER2Q8N7J2 671 aa6.09□□□□□ -1.43
TTC39C-207ENST00000581394 CLEC4DQ8WXI8 215 aa6.09□□□□□ -1.43
TTC39C-207ENST00000581394 ADOQ96SZ5 270 aa6.09□□□□□ -1.43
TTC39C-207ENST00000581394 SLC27A2O14975 620 aa6.08□□□□□ -1.44
TTC39C-207ENST00000581394 FBXO21O94952 628 aa6.08□□□□□ -1.44
TTC39C-207ENST00000581394 CKMP06732 381 aa6.08□□□□□ -1.44
TTC39C-207ENST00000581394 HDLBPQ00341 1268 aaKnown RBP6.08□□□□□ -1.44
TTC39C-207ENST00000581394 ABHD18Q0P651 414 aa6.08□□□□□ -1.44
TTC39C-207ENST00000581394 MAP4K2Q12851 820 aa6.08□□□□□ -1.44
TTC39C-207ENST00000581394 SKIDA1Q1XH10 827 aa6.08□□□□□ -1.44
TTC39C-207ENST00000581394 GIMAP8Q8ND71 665 aaPredicted RBP6.08□□□□□ -1.44
TTC39C-207ENST00000581394 PIP4K2CQ8TBX8 421 aa6.08□□□□□ -1.44
TTC39C-207ENST00000581394 LRRC37BQ96QE4 947 aa6.08□□□□□ -1.44
TTC39C-207ENST00000581394 GPR27Q9NS67 375 aa6.08□□□□□ -1.44
TTC39C-207ENST00000581394 ACTR10Q9NZ32 417 aa6.08□□□□□ -1.44
TTC39C-207ENST00000581394 ZFP69BQ9UJL9 534 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms