RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 SMIM10L2BP0DMW5 78 aa11.9□□□□□ -0.5
GGA3-210ENST00000580799 ICAM3P32942 547 aa11.9□□□□□ -0.5
GGA3-210ENST00000580799 NEDD9Q14511 834 aa11.9□□□□□ -0.5
GGA3-210ENST00000580799 SART3Q15020 963 aaKnown RBP11.9□□□□□ -0.5
GGA3-210ENST00000580799 PTPROQ16827 1216 aa11.9□□□□□ -0.5
GGA3-210ENST00000580799 LEXMQ3ZCV2 418 aa11.9□□□□□ -0.5
GGA3-210ENST00000580799 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.9□□□□□ -0.5
GGA3-210ENST00000580799 CYB5R4Q7L1T6 521 aa11.9□□□□□ -0.5
GGA3-210ENST00000580799 FCHSD1Q86WN1 690 aa11.9□□□□□ -0.5
GGA3-210ENST00000580799 MYOCDQ8IZQ8 938 aa11.9□□□□□ -0.5
GGA3-210ENST00000580799 SEPT8Q92599 483 aa11.9□□□□□ -0.5
GGA3-210ENST00000580799 MRPL38Q96DV4 380 aaKnown RBP11.9□□□□□ -0.5
GGA3-210ENST00000580799 INPP4AQ96PE3 977 aaPredicted RBP11.9□□□□□ -0.5
GGA3-210ENST00000580799 PIGSQ96S52 555 aa11.9□□□□□ -0.5
GGA3-210ENST00000580799 C17orf80Q9BSJ5 609 aa11.9□□□□□ -0.5
GGA3-210ENST00000580799 EPHX3Q9H6B9 360 aa11.9□□□□□ -0.5
GGA3-210ENST00000580799 U3KPZ7 1027 aaPredicted RBP11.9□□□□□ -0.5
GGA3-210ENST00000580799 RALGAPA2Q2PPJ7 1873 aa11.89□□□□□ -0.51
GGA3-210ENST00000580799 SPATA31C2B4DYI2 1134 aa11.89□□□□□ -0.51
GGA3-210ENST00000580799 IFIT3O14879 490 aaKnown RBP11.89□□□□□ -0.51
GGA3-210ENST00000580799 FIBPO43427 364 aa11.89□□□□□ -0.51
GGA3-210ENST00000580799 SORBS3O60504 671 aa11.89□□□□□ -0.51
GGA3-210ENST00000580799 GPR37L1O60883 481 aa11.89□□□□□ -0.51
GGA3-210ENST00000580799 TROAPQ12815 778 aa11.89□□□□□ -0.51
GGA3-210ENST00000580799 PUS10Q3MIT2 529 aaKnown RBP11.89□□□□□ -0.51
GGA3-210ENST00000580799 TIGD5Q53EQ6 642 aa11.89□□□□□ -0.51
GGA3-210ENST00000580799 METTL7BQ6UX53 244 aa11.89□□□□□ -0.51
GGA3-210ENST00000580799 RALYLQ86SE5 291 aaKnown RBP11.89□□□□□ -0.51
GGA3-210ENST00000580799 RUFY2Q8WXA3 655 aa11.89□□□□□ -0.51
GGA3-210ENST00000580799 APBB2Q92870 758 aa11.89□□□□□ -0.51
GGA3-210ENST00000580799 YME1L1Q96TA2 773 aa11.89□□□□□ -0.51
GGA3-210ENST00000580799 RNPEPQ9H4A4 650 aa11.89□□□□□ -0.51
GGA3-210ENST00000580799 ZNF215Q9UL58 517 aaPredicted RBP11.89□□□□□ -0.51
GGA3-210ENST00000580799 PI4K2BG5E9Z4 385 aa11.88□□□□□ -0.51
GGA3-210ENST00000580799 TREHO43280 583 aa11.88□□□□□ -0.51
GGA3-210ENST00000580799 CYTH3O43739 400 aa11.88□□□□□ -0.51
GGA3-210ENST00000580799 KCNA5P22460 613 aa11.88□□□□□ -0.51
GGA3-210ENST00000580799 MRPS9P82933 396 aaKnown RBP11.88□□□□□ -0.51
GGA3-210ENST00000580799 WTAPQ15007 396 aa11.88□□□□□ -0.51
GGA3-210ENST00000580799 SLC35G1Q2M3R5 365 aa11.88□□□□□ -0.51
GGA3-210ENST00000580799 EPC2Q52LR7 807 aa11.88□□□□□ -0.51
GGA3-210ENST00000580799 XRRA1Q6P2D8 792 aa11.88□□□□□ -0.51
GGA3-210ENST00000580799 FAM178BQ8IXR5 827 aa11.88□□□□□ -0.51
GGA3-210ENST00000580799 GIMAP8Q8ND71 665 aaPredicted RBP11.88□□□□□ -0.51
GGA3-210ENST00000580799 GPKOWQ92917 476 aaPredicted RBP eCLIP11.88□□□□□ -0.51
GGA3-210ENST00000580799 TOP1MTQ969P6 601 aa11.88□□□□□ -0.51
GGA3-210ENST00000580799 IL25Q9H293 177 aa11.88□□□□□ -0.51
GGA3-210ENST00000580799 NLRC5Q86WI3 1866 aa11.88□□□□□ -0.51
GGA3-210ENST00000580799 H3BNC9 293 aa11.87□□□□□ -0.51
GGA3-210ENST00000580799 CYP21A2P08686 494 aa11.87□□□□□ -0.51
GGA3-210ENST00000580799 FAM26DQ5JW98 314 aa11.87□□□□□ -0.51
GGA3-210ENST00000580799 PCNX4Q63HM2 1172 aa11.87□□□□□ -0.51
GGA3-210ENST00000580799 CYFIP1Q7L576 1253 aa11.87□□□□□ -0.51
GGA3-210ENST00000580799 CATIPQ7Z7H3 387 aa11.87□□□□□ -0.51
GGA3-210ENST00000580799 GJD3Q8N144 294 aa11.87□□□□□ -0.51
GGA3-210ENST00000580799 NCOA7Q8NI08 942 aa11.87□□□□□ -0.51
GGA3-210ENST00000580799 ZFP91Q96JP5 570 aaPredicted RBP11.87□□□□□ -0.51
GGA3-210ENST00000580799 MAP3K14Q99558 947 aa11.87□□□□□ -0.51
GGA3-210ENST00000580799 GPR20Q99678 358 aa11.87□□□□□ -0.51
GGA3-210ENST00000580799 SENP7Q9BQF6 1050 aa11.87□□□□□ -0.51
GGA3-210ENST00000580799 CD320Q9NPF0 282 aa11.87□□□□□ -0.51
GGA3-210ENST00000580799 SETD4Q9NVD3 440 aa11.87□□□□□ -0.51
GGA3-210ENST00000580799 FAM50BQ9Y247 325 aa11.87□□□□□ -0.51
GGA3-210ENST00000580799 DOCK5Q9H7D0 1870 aa11.87□□□□□ -0.51
GGA3-210ENST00000580799 NRCAMQ92823 1304 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 PIK3CDO00329 1044 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 CTSHP09668 335 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 SMARCA1P28370 1054 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 HOXD11P31277 338 aaPredicted RBP11.86□□□□□ -0.51
GGA3-210ENST00000580799 KIF5BP33176 963 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 ADAM17P78536 824 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 GPM6BQ13491 265 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 COL19A1Q14993 1142 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 PTCRAQ6ISU1 281 aaPredicted RBP11.86□□□□□ -0.51
GGA3-210ENST00000580799 RPAINQ86UA6 219 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 TMEM192Q8IY95 271 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 BANK1Q8NDB2 785 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.86□□□□□ -0.51
GGA3-210ENST00000580799 SMARCC2Q8TAQ2 1214 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 NEK9Q8TD19 979 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 LMBR1Q8WVP7 490 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 KHSRPQ92945 711 aaKnown RBP eCLIP11.86□□□□□ -0.51
GGA3-210ENST00000580799 CUL5Q93034 780 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 SPZ1Q9BXG8 430 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 IFIH1Q9BYX4 1025 aaKnown RBP11.86□□□□□ -0.51
GGA3-210ENST00000580799 BCAS3Q9H6U6 928 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 C11orf16Q9NQ32 467 aa11.86□□□□□ -0.51
GGA3-210ENST00000580799 BRWD1Q9NSI6 2320 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.85□□□□□ -0.51
GGA3-210ENST00000580799 GRXCR2A6NFK2 248 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 E7EWF7 191 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 UPP2O95045 317 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 ALADP13716 330 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 ARHGAP4P98171 946 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 SEMA3FQ13275 785 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 TTC22Q5TAA0 569 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 TAF2Q6P1X5 1199 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 NLRX1Q86UT6 975 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 TRIM50Q86XT4 487 aa11.85□□□□□ -0.51
GGA3-210ENST00000580799 CTCFLQ8NI51 663 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms