RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 ZFP91Q96JP5 570 aaPredicted RBP15.76■□□□□ 0.11
GGA3-208ENST00000579743 CTAGE1Q96RT6 745 aa15.76■□□□□ 0.11
GGA3-208ENST00000579743 RBM28Q9NW13 759 aaKnown RBP15.76■□□□□ 0.11
GGA3-208ENST00000579743 SCN5AQ14524 2016 aa15.76■□□□□ 0.11
GGA3-208ENST00000579743 CUL9Q8IWT3 2517 aa15.76■□□□□ 0.11
GGA3-208ENST00000579743 TRIP12Q14669 1992 aaPredicted RBP15.76■□□□□ 0.11
GGA3-208ENST00000579743 MAFGO15525 162 aa15.75■□□□□ 0.11
GGA3-208ENST00000579743 LGR5O75473 907 aa15.75■□□□□ 0.11
GGA3-208ENST00000579743 AMHP03971 560 aa15.75■□□□□ 0.11
GGA3-208ENST00000579743 SMIM10L2AP0DMW4 78 aa15.75■□□□□ 0.11
GGA3-208ENST00000579743 SMIM10L2BP0DMW5 78 aa15.75■□□□□ 0.11
GGA3-208ENST00000579743 KRT32Q14532 448 aa15.75■□□□□ 0.11
GGA3-208ENST00000579743 NECTIN1Q15223 517 aa15.75■□□□□ 0.11
GGA3-208ENST00000579743 SRBD1Q8N5C6 995 aaKnown RBP15.75■□□□□ 0.11
GGA3-208ENST00000579743 ARNTL2Q8WYA1 636 aa15.75■□□□□ 0.11
GGA3-208ENST00000579743 TNPO1Q92973 898 aaKnown RBP15.75■□□□□ 0.11
GGA3-208ENST00000579743 GPRASP2Q96D09 838 aa15.75■□□□□ 0.11
GGA3-208ENST00000579743 ASB2Q96Q27 587 aa15.75■□□□□ 0.11
GGA3-208ENST00000579743 RAD9AQ99638 391 aa15.75■□□□□ 0.11
GGA3-208ENST00000579743 GBF1Q92538 1859 aa15.75■□□□□ 0.11
GGA3-208ENST00000579743 MEIS2O14770 477 aa15.74■□□□□ 0.11
GGA3-208ENST00000579743 NBNO60934 754 aa15.74■□□□□ 0.11
GGA3-208ENST00000579743 PLEKHA8P1O95397 391 aa15.74■□□□□ 0.11
GGA3-208ENST00000579743 HMGB1P09429 215 aaKnown RBP15.74■□□□□ 0.11
GGA3-208ENST00000579743 FGD1P98174 961 aa15.74■□□□□ 0.11
GGA3-208ENST00000579743 TAP1Q03518 808 aa15.74■□□□□ 0.11
GGA3-208ENST00000579743 UTP14CQ5TAP6 766 aaKnown RBP15.74■□□□□ 0.11
GGA3-208ENST00000579743 HEATR3Q7Z4Q2 680 aa15.74■□□□□ 0.11
GGA3-208ENST00000579743 RSPH3Q86UC2 560 aa15.74■□□□□ 0.11
GGA3-208ENST00000579743 MICU3Q86XE3 530 aa15.74■□□□□ 0.11
GGA3-208ENST00000579743 CCDC82Q8N4S0 544 aa15.74■□□□□ 0.11
GGA3-208ENST00000579743 NEK1Q96PY6 1258 aa15.74■□□□□ 0.11
GGA3-208ENST00000579743 GPR20Q99678 358 aa15.74■□□□□ 0.11
GGA3-208ENST00000579743 GLT8D2Q9H1C3 349 aa15.74■□□□□ 0.11
GGA3-208ENST00000579743 NRCAMQ92823 1304 aa15.73■□□□□ 0.11
GGA3-208ENST00000579743 RXRAP19793 462 aa15.73■□□□□ 0.11
GGA3-208ENST00000579743 POU3F3P20264 500 aaPredicted RBP15.73■□□□□ 0.11
GGA3-208ENST00000579743 ZNF200P98182 395 aaPredicted RBP15.73■□□□□ 0.11
GGA3-208ENST00000579743 SP4Q02446 784 aa15.73■□□□□ 0.11
GGA3-208ENST00000579743 SGMS1Q86VZ5 419 aa15.73■□□□□ 0.11
GGA3-208ENST00000579743 SEPT8Q92599 483 aa15.73■□□□□ 0.11
GGA3-208ENST00000579743 GPKOWQ92917 476 aaPredicted RBP eCLIP15.73■□□□□ 0.11
GGA3-208ENST00000579743 RNPEPQ9H4A4 650 aa15.73■□□□□ 0.11
GGA3-208ENST00000579743 CERS4Q9HA82 394 aa15.73■□□□□ 0.11
GGA3-208ENST00000579743 hCG_1984214I3L0E3 225 aa15.72■□□□□ 0.11
GGA3-208ENST00000579743 GJB5O95377 273 aa15.72■□□□□ 0.11
GGA3-208ENST00000579743 FOSP01100 380 aaPredicted RBP15.72■□□□□ 0.11
GGA3-208ENST00000579743 RPLP2P05387 115 aaKnown RBP15.72■□□□□ 0.11
GGA3-208ENST00000579743 ARHGAP4P98171 946 aa15.72■□□□□ 0.11
GGA3-208ENST00000579743 MTMR1Q13613 665 aa15.72■□□□□ 0.11
GGA3-208ENST00000579743 TRIM71Q2Q1W2 868 aaKnown RBP15.72■□□□□ 0.11
GGA3-208ENST00000579743 TMTC3Q6ZXV5 915 aa15.72■□□□□ 0.11
GGA3-208ENST00000579743 DHX32Q7L7V1 743 aaKnown RBP15.72■□□□□ 0.11
GGA3-208ENST00000579743 CMTR1Q8N1G2 835 aaKnown RBP15.72■□□□□ 0.11
GGA3-208ENST00000579743 ZNF713Q8N859 430 aaPredicted RBP15.72■□□□□ 0.11
GGA3-208ENST00000579743 SEPT1Q8WYJ6 367 aa15.72■□□□□ 0.11
GGA3-208ENST00000579743 TGS1Q96RS0 853 aaKnown RBP15.72■□□□□ 0.11
GGA3-208ENST00000579743 LMCD1Q9NZU5 365 aa15.72■□□□□ 0.11
GGA3-208ENST00000579743 COG5Q9UP83 839 aa15.72■□□□□ 0.11
GGA3-208ENST00000579743 INSL6Q9Y581 213 aa15.72■□□□□ 0.11
GGA3-208ENST00000579743 CCDC196A0A1B0GTZ2 297 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 TNFRSF10AO00220 468 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 TREHO43280 583 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 ZBTB43O43298 467 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 CDC45O75419 566 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 TCF7P36402 384 aaPredicted RBP15.71■□□□□ 0.11
GGA3-208ENST00000579743 NAPAP54920 295 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 PPP1R18Q6NYC8 613 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 TAF2Q6P1X5 1199 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 APOA5Q6Q788 366 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 DBF4BQ8NFT6 615 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 APBB2Q92870 758 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 GLG1Q92896 1179 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 LRRC2Q9BYS8 371 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 SMARCAD1Q9H4L7 1026 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 AZI2Q9H6S1 392 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 PRDM6Q9NQX0 595 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 SETD4Q9NVD3 440 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 ERAP1Q9NZ08 941 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 PCDHA6Q9UN73 950 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 PCDHA8Q9Y5H6 950 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 MTCH2Q9Y6C9 303 aa15.71■□□□□ 0.11
GGA3-208ENST00000579743 HOXC8P31273 242 aa15.7■□□□□ 0.1
GGA3-208ENST00000579743 DEFB103AP81534 67 aa15.7■□□□□ 0.1
GGA3-208ENST00000579743 SEMA3FQ13275 785 aa15.7■□□□□ 0.1
GGA3-208ENST00000579743 GPNMBQ14956 572 aa15.7■□□□□ 0.1
GGA3-208ENST00000579743 RTN1Q16799 776 aa15.7■□□□□ 0.1
GGA3-208ENST00000579743 PLEKHG4Q58EX7 1191 aa15.7■□□□□ 0.1
GGA3-208ENST00000579743 MYOCDQ8IZQ8 938 aa15.7■□□□□ 0.1
GGA3-208ENST00000579743 SDF4Q9BRK5 362 aa15.7■□□□□ 0.1
GGA3-208ENST00000579743 NAP1L2Q9ULW6 460 aaPredicted RBP15.7■□□□□ 0.1
GGA3-208ENST00000579743 TET1Q8NFU7 2136 aa15.7■□□□□ 0.1
GGA3-208ENST00000579743 LAMA2P24043 3122 aaKnown RBP15.7■□□□□ 0.1
GGA3-208ENST00000579743 RFXAPO00287 272 aa15.69■□□□□ 0.1
GGA3-208ENST00000579743 CTSHP09668 335 aa15.69■□□□□ 0.1
GGA3-208ENST00000579743 ADCY7P51828 1080 aa15.69■□□□□ 0.1
GGA3-208ENST00000579743 RCAN1P53805 252 aa15.69■□□□□ 0.1
GGA3-208ENST00000579743 UBE2SQ16763 222 aa15.69■□□□□ 0.1
GGA3-208ENST00000579743 TSGA10IPQ3SY00 556 aa15.69■□□□□ 0.1
GGA3-208ENST00000579743 FAM117BQ6P1L5 589 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms