RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 GJB4Q9NTQ9 266 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 ATP11BQ9Y2G3 1177 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 KIF3AQ9Y496 699 aa11.42□□□□□ -0.58
MKS1-208ENST00000579358 MKI67P46013 3256 aaKnown RBP11.41□□□□□ -0.58
MKS1-208ENST00000579358 CCDC194A0A1B0GVG4 234 aa11.41□□□□□ -0.58
MKS1-208ENST00000579358 NOP56O00567 594 aaKnown RBP11.41□□□□□ -0.58
MKS1-208ENST00000579358 ATP9AO75110 1047 aa11.41□□□□□ -0.58
MKS1-208ENST00000579358 F2P00734 622 aa11.41□□□□□ -0.58
MKS1-208ENST00000579358 NFRKBQ6P4R8 1299 aa11.41□□□□□ -0.58
MKS1-208ENST00000579358 PLA2G4DQ86XP0 818 aa11.41□□□□□ -0.58
MKS1-208ENST00000579358 CYP2W1Q8TAV3 490 aa11.41□□□□□ -0.58
MKS1-208ENST00000579358 OXER1Q8TDS5 423 aa11.41□□□□□ -0.58
MKS1-208ENST00000579358 TNFRSF25Q93038 417 aa11.41□□□□□ -0.58
MKS1-208ENST00000579358 C8orf76Q96K31 380 aa11.41□□□□□ -0.58
MKS1-208ENST00000579358 GPR20Q99678 358 aa11.41□□□□□ -0.58
MKS1-208ENST00000579358 SDF4Q9BRK5 362 aa11.41□□□□□ -0.58
MKS1-208ENST00000579358 AGO4Q9HCK5 861 aaKnown RBP11.41□□□□□ -0.58
MKS1-208ENST00000579358 GRIN2DO15399 1336 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 CYP3A7-CYP3A51PA0A087WV96 503 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 DCDC2CA8MYV0 355 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 HAS3O00219 553 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 TLR3O15455 904 aaKnown RBP11.4□□□□□ -0.58
MKS1-208ENST00000579358 EDIL3O43854 480 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 ARP10275 920 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 GCFC2P16383 781 aaKnown RBP11.4□□□□□ -0.58
MKS1-208ENST00000579358 CYP3A7P24462 503 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 PSMC6P62333 389 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 PTPN11Q06124 597 aaPredicted RBP11.4□□□□□ -0.58
MKS1-208ENST00000579358 SAFBQ15424 915 aaKnown RBP eCLIP11.4□□□□□ -0.58
MKS1-208ENST00000579358 Q4G0T1 1027 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 PRR16Q569H4 304 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 NEK8Q86SG6 692 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 SESTD1Q86VW0 696 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 FAM126BQ8IXS8 530 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 DIS3L2Q8IYB7 885 aaKnown RBP11.4□□□□□ -0.58
MKS1-208ENST00000579358 FBXO18Q8NFZ0 1043 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 KAT2BQ92831 832 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 LENG9Q96B70 501 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 MBOAT7Q96N66 472 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 NAP1L4Q99733 375 aaKnown RBP11.4□□□□□ -0.58
MKS1-208ENST00000579358 BCAS3Q9H6U6 928 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 JPH1Q9HDC5 661 aaPredicted RBP11.4□□□□□ -0.58
MKS1-208ENST00000579358 PDLIM7Q9NR12 457 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 SLC9A2Q9UBY0 812 aa11.4□□□□□ -0.58
MKS1-208ENST00000579358 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.4□□□□□ -0.58
MKS1-208ENST00000579358 KIAA1217Q5T5P2 1943 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 IPO5O00410 1097 aaKnown RBP11.39□□□□□ -0.59
MKS1-208ENST00000579358 SORBS3O60504 671 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 PQBP1O60828 265 aaKnown RBP11.39□□□□□ -0.59
MKS1-208ENST00000579358 CD4P01730 458 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 LGALS2P05162 132 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 CLTBP09497 229 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 TLE2Q04725 743 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 NR5A1Q13285 461 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 ITGB3BPQ13352 177 aaPredicted RBP11.39□□□□□ -0.59
MKS1-208ENST00000579358 CUL4AQ13619 759 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 MFSD10Q14728 455 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 INF2Q27J81 1249 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 NBPF20Q3BBV1 942 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 PPP4R3AQ6IN85 833 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 PIK3AP1Q6ZUJ8 805 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 SEPT1Q8WYJ6 367 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 ZNF577Q9BSK1 485 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 C16orf70Q9BSU1 422 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 TBC1D22BQ9NU19 505 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 PKD2L1Q9P0L9 805 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 PRKAG2Q9UGJ0 569 aa11.39□□□□□ -0.59
MKS1-208ENST00000579358 EMSYQ7Z589 1322 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 BTBD18B2RXH4 712 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 H0YGN5 161 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 KIAA0355O15063 1070 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 DHX15O43143 795 aaKnown RBP11.38□□□□□ -0.59
MKS1-208ENST00000579358 TDP2O95551 362 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 SUPT20HL2P0C7V6 817 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 ZNF286BP0CG31 522 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 TCF7P36402 384 aaPredicted RBP11.38□□□□□ -0.59
MKS1-208ENST00000579358 PSEN2P49810 448 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 FOSBP53539 338 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 SP4Q02446 784 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 FAAP100Q0VG06 881 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 LETM2Q2VYF4 491 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 SNX21Q969T3 373 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 RIT2Q99578 217 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 FOXP1Q9H334 677 aaPredicted RBP11.38□□□□□ -0.59
MKS1-208ENST00000579358 TCEAL9Q9UHQ7 104 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 TBX21Q9UL17 535 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 ZNF215Q9UL58 517 aaPredicted RBP11.38□□□□□ -0.59
MKS1-208ENST00000579358 SMC3Q9UQE7 1217 aa11.38□□□□□ -0.59
MKS1-208ENST00000579358 GSTTP1A0A1W2PQM5 241 aa11.37□□□□□ -0.59
MKS1-208ENST00000579358 H3BRB1 525 aa11.37□□□□□ -0.59
MKS1-208ENST00000579358 K7ELQ4 463 aaPredicted RBP11.37□□□□□ -0.59
MKS1-208ENST00000579358 MSH4O15457 936 aa11.37□□□□□ -0.59
MKS1-208ENST00000579358 B4GALT4O60513 344 aa11.37□□□□□ -0.59
MKS1-208ENST00000579358 LGR5O75473 907 aa11.37□□□□□ -0.59
MKS1-208ENST00000579358 ATG7O95352 703 aa11.37□□□□□ -0.59
MKS1-208ENST00000579358 GJB2P29033 226 aa11.37□□□□□ -0.59
MKS1-208ENST00000579358 ACTR2P61160 394 aa11.37□□□□□ -0.59
MKS1-208ENST00000579358 KRT76Q01546 638 aa11.37□□□□□ -0.59
MKS1-208ENST00000579358 GUCY1B3Q02153 619 aa11.37□□□□□ -0.59
MKS1-208ENST00000579358 KIAA0753Q2KHM9 967 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms