RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ERCC3P19447 782 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 VEGFBP49765 207 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 RPS6P62753 249 aaKnown RBP9.13□□□□□ -0.95
COPS3-215ENST00000578317 PTK7Q13308 1070 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 PLS1Q14651 629 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 TAF1CQ15572 869 aaPredicted RBP9.13□□□□□ -0.95
COPS3-215ENST00000578317 MUM1L1Q5H9M0 696 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 ABRAQ8N0Z2 381 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 ANKLE1Q8NAG6 615 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 SYTL5Q8TDW5 730 aaPredicted RBP9.13□□□□□ -0.95
COPS3-215ENST00000578317 CRYGNQ8WXF5 182 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 PAGR1Q9BTK6 254 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 BIN2Q9UBW5 565 aaPredicted RBP9.13□□□□□ -0.95
COPS3-215ENST00000578317 CFAP45Q9UL16 551 aa9.13□□□□□ -0.95
COPS3-215ENST00000578317 MORC2Q9Y6X9 1032 aaPredicted RBP9.13□□□□□ -0.95
COPS3-215ENST00000578317 LOC285556D6RIA3 1793 aa9.12□□□□□ -0.95
COPS3-215ENST00000578317 SPDYE3A6NKU9 549 aa9.12□□□□□ -0.95
COPS3-215ENST00000578317 AOC2O75106 756 aa9.12□□□□□ -0.95
COPS3-215ENST00000578317 TOB1P50616 345 aaPredicted RBP9.12□□□□□ -0.95
COPS3-215ENST00000578317 ORC2Q13416 577 aaPredicted RBP9.12□□□□□ -0.95
COPS3-215ENST00000578317 NONOQ15233 471 aaKnown RBP eCLIP9.12□□□□□ -0.95
COPS3-215ENST00000578317 EML3Q32P44 896 aa9.12□□□□□ -0.95
COPS3-215ENST00000578317 EARS2Q5JPH6 523 aaKnown RBP9.12□□□□□ -0.95
COPS3-215ENST00000578317 JAKMIP3Q5VZ66 844 aa9.12□□□□□ -0.95
COPS3-215ENST00000578317 PPP4R3AQ6IN85 833 aa9.12□□□□□ -0.95
COPS3-215ENST00000578317 RNF207Q6ZRF8 634 aa9.12□□□□□ -0.95
COPS3-215ENST00000578317 PIK3AP1Q6ZUJ8 805 aa9.12□□□□□ -0.95
COPS3-215ENST00000578317 ZBTB33Q86T24 672 aa9.12□□□□□ -0.95
COPS3-215ENST00000578317 ANKRD13CQ8N6S4 541 aa9.12□□□□□ -0.95
COPS3-215ENST00000578317 FAM200AQ8TCP9 573 aa9.12□□□□□ -0.95
COPS3-215ENST00000578317 EMID1Q96A84 441 aaPredicted RBP9.12□□□□□ -0.95
COPS3-215ENST00000578317 ZNF396Q96N95 335 aaPredicted RBP9.12□□□□□ -0.95
COPS3-215ENST00000578317 A1CFQ9NQ94 594 aaKnown RBP9.12□□□□□ -0.95
COPS3-215ENST00000578317 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.12□□□□□ -0.95
COPS3-215ENST00000578317 CYP39A1Q9NYL5 469 aa9.12□□□□□ -0.95
COPS3-215ENST00000578317 NOL7Q9UMY1 257 aaKnown RBP9.12□□□□□ -0.95
COPS3-215ENST00000578317 PFASO15067 1338 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 CYP3A7-CYP3A51PA0A087WV96 503 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 LOC102724159A0A0B4J2E5 919 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 EDIL3O43854 480 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 BAG4O95429 457 aaKnown RBP9.11□□□□□ -0.95
COPS3-215ENST00000578317 CYP3A4P08684 503 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 TAL1P17542 331 aaPredicted RBP9.11□□□□□ -0.95
COPS3-215ENST00000578317 CYP3A7P24462 503 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 MAPK4P31152 587 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 SREBF1P36956 1147 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 CRHR2Q13324 411 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 BAATQ14032 418 aaPredicted RBP9.11□□□□□ -0.95
COPS3-215ENST00000578317 PWP2Q15269 919 aaKnown RBP9.11□□□□□ -0.95
COPS3-215ENST00000578317 UBE2SQ16763 222 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 XRRA1Q6P2D8 792 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 FAM173BQ6P4H8 233 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 MOXD1Q6UVY6 613 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 NCAPG2Q86XI2 1143 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 DNERQ8NFT8 737 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 RASGRP4Q8TDF6 673 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 TBCKQ8TEA7 893 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 NAP1L4Q99733 375 aaKnown RBP9.11□□□□□ -0.95
COPS3-215ENST00000578317 SCAND2PQ9GZW5 306 aaPredicted RBP9.11□□□□□ -0.95
COPS3-215ENST00000578317 HOMER2Q9NSB8 354 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 RTEL1Q9NZ71 1219 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 RCOR1Q9UKL0 485 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 FRMPD4Q14CM0 1322 aa9.11□□□□□ -0.95
COPS3-215ENST00000578317 RLFQ13129 1914 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 DNAJC25-GNG10A0A024R161 153 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 PEX10O60683 326 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 BMP15O95972 392 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 FCER1AP12319 257 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 HOXA13P31271 388 aaPredicted RBP9.1□□□□□ -0.95
COPS3-215ENST00000578317 CIITAP33076 1130 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 NASPP49321 788 aaPredicted RBP9.1□□□□□ -0.95
COPS3-215ENST00000578317 KRT85P78386 507 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 DNM1Q05193 864 aaKnown RBP9.1□□□□□ -0.95
COPS3-215ENST00000578317 GRM1Q13255 1194 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 NOM1Q5C9Z4 860 aaKnown RBP9.1□□□□□ -0.95
COPS3-215ENST00000578317 NEK8Q86SG6 692 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 ANKRD35Q8N283 1001 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 MBOAT7Q96N66 472 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 GBP4Q96PP9 640 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 USP28Q96RU2 1077 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 IWS1Q96ST2 819 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 ANO3Q9BYT9 981 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 PORCNQ9H237 461 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 EHMT1Q9H9B1 1298 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 TMEM260Q9NX78 707 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 COL20A1Q9P218 1284 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 RPTORQ8N122 1335 aa9.1□□□□□ -0.95
COPS3-215ENST00000578317 PTPRFP10586 1907 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 YEATS4O95619 227 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 GCFC2P16383 781 aaKnown RBP9.09□□□□□ -0.95
COPS3-215ENST00000578317 ARHGAP4P98171 946 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 KCTD2Q14681 263 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 SLC39A14Q15043 492 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 INF2Q27J81 1249 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 ANO1Q5XXA6 986 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 PHLDB3Q6NSJ2 640 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 NSMFQ6X4W1 530 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 VSIG10LQ86VR7 867 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 FCHSD1Q86WN1 690 aa9.09□□□□□ -0.95
COPS3-215ENST00000578317 TRIM50Q86XT4 487 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms