RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 ORC3Q9UBD5 711 aaPredicted RBP10.53□□□□□ -0.72
CDKN2A-211ENST00000577854 TBX21Q9UL17 535 aa10.53□□□□□ -0.72
CDKN2A-211ENST00000577854 ZNF215Q9UL58 517 aaPredicted RBP10.53□□□□□ -0.72
CDKN2A-211ENST00000577854 UBIAD1Q9Y5Z9 338 aa10.53□□□□□ -0.72
CDKN2A-211ENST00000577854 A0A1W2PPC1 479 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 PPFIA4O75335 1185 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 LGALS2P05162 132 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 CSF2RAP15509 400 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 SREBF1P36956 1147 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 TRIM29Q14134 588 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 CEP55Q53EZ4 464 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 PLA2G4DQ86XP0 818 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 TRIM50Q86XT4 487 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 TEX2Q8IWB9 1127 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 CCDC155Q8N6L0 562 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 SLC43A3Q8NBI5 491 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 CYP2W1Q8TAV3 490 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 WASF1Q92558 559 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 GLG1Q92896 1179 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 AIFM3Q96NN9 605 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 SENP7Q9BQF6 1050 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 JPH1Q9HDC5 661 aaPredicted RBP10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 SH3GLB2Q9NR46 395 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 KCNH7Q9NS40 1196 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 HDAC6Q9UBN7 1215 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 GTF3C3Q9Y5Q9 886 aa10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 RANBP2P49792 3224 aaKnown RBP10.52□□□□□ -0.73
CDKN2A-211ENST00000577854 H3BRB1 525 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 ATP9AO75110 1047 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 LARGE1O95461 756 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 F2P00734 622 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 CD4P01730 458 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 ARP10275 920 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 ACRP10323 421 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 MARK3P27448 753 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 TCF7P36402 384 aaPredicted RBP10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 CLK2P49760 499 aaKnown RBP10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 PTPN11Q06124 597 aaPredicted RBP10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 BFSP2Q13515 415 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 SHHQ15465 462 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 ME3Q16798 604 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 PRR16Q569H4 304 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 C9orf50Q5SZB4 431 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 GDF6Q6KF10 455 aaPredicted RBP10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 MFSD5Q6N075 450 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 DEFB128Q7Z7B8 93 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 CCDC83Q8IWF9 413 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 BLIDQ8IZY5 108 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 SEPT1Q8WYJ6 367 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 KAT2BQ92831 832 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 GTF3C6Q969F1 213 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 SCLYQ96I15 445 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 GPR20Q99678 358 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 ZNF577Q9BSK1 485 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 NOC4LQ9BVI4 516 aaKnown RBP10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 PRO3102Q9H379 93 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 TUT1Q9H6E5 874 aaKnown RBP10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 AZI2Q9H6S1 392 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 BRMS1Q9HCU9 246 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 SLC9A2Q9UBY0 812 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 PCDHA4Q9UN74 947 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 KCNJ14Q9UNX9 436 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 UMODL1Q5DID0 1318 aa10.51□□□□□ -0.73
CDKN2A-211ENST00000577854 CCDC194A0A1B0GVG4 234 aa10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 C17orf102A2RUQ5 167 aa10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 ZBBXA8MT70 800 aa10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 BACH1O14867 736 aa10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 ADAMTS3O15072 1205 aa10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 MAFGO15525 162 aa10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 ST18O60284 1047 aa10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 KCNA2P16389 499 aa10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 FXR1P51114 621 aaKnown RBP eCLIP10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 SETQ01105 290 aaPredicted RBP10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 ATP6V0A1Q93050 837 aa10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 LRCH3Q96II8 777 aa10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 FTOQ9C0B1 505 aaKnown RBP eCLIP10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 MTIF3Q9H2K0 278 aaKnown RBP10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 GTF2IRD1Q9UHL9 959 aa10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 LIMCH1Q9UPQ0 1083 aa10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 TRPC6Q9Y210 931 aa10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 SAMM50Q9Y512 469 aa10.5□□□□□ -0.73
CDKN2A-211ENST00000577854 FAM86B1E9PN63 330 aa10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 MARCH6O60337 910 aa10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 JAK2O60674 1132 aa10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 FAM86B2P0C5J1 330 aa10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 SMIM10L2AP0DMW4 78 aa10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 SMIM10L2BP0DMW5 78 aa10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 GNAT1P11488 350 aa10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 EPHB4P54760 987 aa10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 IGBP1P78318 339 aa10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 ZNF200P98182 395 aaPredicted RBP10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 NONOQ15233 471 aaKnown RBP eCLIP10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 GALNT17Q6IS24 598 aa10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 PSRC1Q6PGN9 363 aaPredicted RBP10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 TRMT1LQ7Z2T5 733 aaKnown RBP10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 KRT25Q7Z3Z0 450 aa10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 RPUSD2Q8IZ73 545 aaKnown RBP10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 TBCKQ8TEA7 893 aa10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 C16orf70Q9BSU1 422 aa10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 AGO4Q9HCK5 861 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms