RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 SPATA1Q5VX52 437 aa15.36■□□□□ 0.05
RNF43-202ENST00000577625 FCHSD1Q86WN1 690 aa15.36■□□□□ 0.05
RNF43-202ENST00000577625 ZNF280CQ8ND82 737 aa15.36■□□□□ 0.05
RNF43-202ENST00000577625 AGBL1Q96MI9 1066 aa15.36■□□□□ 0.05
RNF43-202ENST00000577625 EIF3CQ99613 913 aaKnown RBP15.36■□□□□ 0.05
RNF43-202ENST00000577625 NUDT12Q9BQG2 462 aa15.36■□□□□ 0.05
RNF43-202ENST00000577625 CXorf56Q9H5V9 222 aa15.36■□□□□ 0.05
RNF43-202ENST00000577625 CCPG1Q9ULG6 757 aa15.36■□□□□ 0.05
RNF43-202ENST00000577625 PCDHA12Q9UN75 941 aa15.36■□□□□ 0.05
RNF43-202ENST00000577625 CCP110O43303 1012 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 KLRC4O43908 158 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 CYP3A4P08684 503 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 PRR16Q569H4 304 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 KLHL10Q6JEL2 608 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 SNX29Q8TEQ0 813 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 RPAP3Q9H6T3 665 aaPredicted RBP15.35■□□□□ 0.05
RNF43-202ENST00000577625 AS3MTQ9HBK9 375 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 ARFGAP3Q9NP61 516 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 BLOC1S4Q9NUP1 217 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 PPP1R9AQ9ULJ8 1098 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 MARCH6O60337 910 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 FLOT1O75955 427 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 CPP00450 1065 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 ETF1P62495 437 aaKnown RBP15.35■□□□□ 0.05
RNF43-202ENST00000577625 SUPT20HL1Q3ZLR7 823 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 TMEM119Q4V9L6 283 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 NOL9Q5SY16 702 aaKnown RBP15.35■□□□□ 0.05
RNF43-202ENST00000577625 KRT79Q5XKE5 535 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 GPR161Q8N6U8 529 aaKnown RBP15.35■□□□□ 0.05
RNF43-202ENST00000577625 CCDC150Q8NCX0 1101 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 UIMC1Q96RL1 719 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 C7orf25Q9BPX7 421 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 TRIM9Q9C026 710 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 SLC38A10Q9HBR0 1119 aa15.35■□□□□ 0.05
RNF43-202ENST00000577625 TBX3O15119 743 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 NRDCO43847 1150 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 RHOBTB3O94955 611 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 CORO7P57737 925 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 AMPD3Q01432 767 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 SLFN12Q8IYM2 578 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.34■□□□□ 0.05
RNF43-202ENST00000577625 CEP89Q96ST8 783 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 SAMSN1Q9NSI8 373 aaKnown RBP15.34■□□□□ 0.05
RNF43-202ENST00000577625 KCNG1Q9UIX4 513 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 ZHX2Q9Y6X8 837 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 SPIRE1Q08AE8 756 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 DLK2Q6UY11 383 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 MMS22LQ6ZRQ5 1243 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 TMC6Q7Z403 805 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 CDK5RAP3Q96JB5 506 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 C12orf42Q96LP6 360 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 DNAI1Q9UI46 699 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 RWDD2AQ9UIY3 292 aa15.34■□□□□ 0.05
RNF43-202ENST00000577625 IGLV3-22A0A075B6J6 115 aa15.33■□□□□ 0.04
RNF43-202ENST00000577625 HSD17B4P51659 736 aa15.33■□□□□ 0.04
RNF43-202ENST00000577625 HMGCS2P54868 508 aa15.33■□□□□ 0.04
RNF43-202ENST00000577625 STX17P56962 302 aa15.33■□□□□ 0.04
RNF43-202ENST00000577625 ECM1Q16610 540 aa15.33■□□□□ 0.04
RNF43-202ENST00000577625 HYIQ5T013 277 aa15.33■□□□□ 0.04
RNF43-202ENST00000577625 KCNK18Q7Z418 384 aa15.33■□□□□ 0.04
RNF43-202ENST00000577625 CYP2W1Q8TAV3 490 aa15.33■□□□□ 0.04
RNF43-202ENST00000577625 CLEC4DQ8WXI8 215 aa15.33■□□□□ 0.04
RNF43-202ENST00000577625 FUT8Q9BYC5 575 aa15.33■□□□□ 0.04
RNF43-202ENST00000577625 CTNND2Q9UQB3 1225 aa15.33■□□□□ 0.04
RNF43-202ENST00000577625 GDAQ9Y2T3 454 aa15.33■□□□□ 0.04
RNF43-202ENST00000577625 ADM5C9JUS6 153 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 NFIBO00712 420 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 MSH4O15457 936 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 SLC26A4O43511 780 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 USP2O75604 605 aaPredicted RBP15.32■□□□□ 0.04
RNF43-202ENST00000577625 PAK1Q13153 545 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 PRKG1Q13976 671 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 CDKAL1Q5VV42 579 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 SV2BQ7L1I2 683 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 CPXCR1Q8N123 301 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 LARP4BQ92615 738 aaKnown RBP15.32■□□□□ 0.04
RNF43-202ENST00000577625 CCDC47Q96A33 483 aaKnown RBP15.32■□□□□ 0.04
RNF43-202ENST00000577625 RAVER2Q9HCJ3 691 aaKnown RBP15.32■□□□□ 0.04
RNF43-202ENST00000577625 PRCPP42785 496 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 GHRHRQ02643 423 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 MCM6Q14566 821 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 HSP90AA4PQ58FG1 418 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 ADSSL1Q8N142 457 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 GIMAP8Q8ND71 665 aaPredicted RBP15.32■□□□□ 0.04
RNF43-202ENST00000577625 RAD54LQ92698 747 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 DCPSQ96C86 337 aaKnown RBP15.32■□□□□ 0.04
RNF43-202ENST00000577625 FAM20AQ96MK3 541 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 MED4Q9NPJ6 270 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 INTS13Q9NVM9 706 aa15.32■□□□□ 0.04
RNF43-202ENST00000577625 KDM3AQ9Y4C1 1321 aa15.31■□□□□ 0.04
RNF43-202ENST00000577625 C19orf81C9J6K1 198 aa15.31■□□□□ 0.04
RNF43-202ENST00000577625 STAT3P40763 770 aa15.31■□□□□ 0.04
RNF43-202ENST00000577625 VSTM4Q8IW00 320 aa15.31■□□□□ 0.04
RNF43-202ENST00000577625 EFCAB13Q8IY85 973 aa15.31■□□□□ 0.04
RNF43-202ENST00000577625 CEP120Q8N960 986 aa15.31■□□□□ 0.04
RNF43-202ENST00000577625 NELFBQ8WX92 580 aa15.31■□□□□ 0.04
RNF43-202ENST00000577625 WNK4Q96J92 1243 aa15.31■□□□□ 0.04
RNF43-202ENST00000577625 L3MBTL3Q96JM7 780 aaPredicted RBP15.31■□□□□ 0.04
RNF43-202ENST00000577625 COL20A1Q9P218 1284 aa15.31■□□□□ 0.04
RNF43-202ENST00000577625 SCN4AP35499 1836 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms