RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 NFRKBQ6P4R8 1299 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 NOL8Q76FK4 1167 aaKnown RBP9.95□□□□□ -0.82
SMG6-216ENST00000575176 TRIM50Q86XT4 487 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 NSUN7Q8NE18 718 aaKnown RBP9.95□□□□□ -0.82
SMG6-216ENST00000575176 BADQ92934 168 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 TNFRSF25Q93038 417 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 PCYT2Q99447 389 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 MPHOSPH6Q99547 160 aaKnown RBP9.95□□□□□ -0.82
SMG6-216ENST00000575176 SENP7Q9BQF6 1050 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 JADE2Q9NQC1 790 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 POLR3EQ9NVU0 708 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 RTEL1Q9NZ71 1219 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 MROH7Q68CQ1 1323 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 KIAA1671Q9BY89 1806 aa9.95□□□□□ -0.82
SMG6-216ENST00000575176 VCANP13611 3396 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 B4DLN1 442 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 MEIS1O00470 390 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 DHX15O43143 795 aaKnown RBP9.94□□□□□ -0.82
SMG6-216ENST00000575176 SORBS3O60504 671 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 SLC34A2O95436 690 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 CCNE2O96020 404 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 LGALS2P05162 132 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 MYL3P08590 195 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 ARP10275 920 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 MRPL12P52815 198 aaKnown RBP9.94□□□□□ -0.82
SMG6-216ENST00000575176 ADAM17P78536 824 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 ARHGAP4P98171 946 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 FGD1P98174 961 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 LAMC2Q13753 1193 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 EARS2Q5JPH6 523 aaKnown RBP9.94□□□□□ -0.82
SMG6-216ENST00000575176 GDF6Q6KF10 455 aaPredicted RBP9.94□□□□□ -0.82
SMG6-216ENST00000575176 KCNV1Q6PIU1 500 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 NECAB1Q8N987 351 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 MBOAT7Q96N66 472 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 MXRA8Q9BRK3 442 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 PHF20Q9BVI0 1012 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 PRDM5Q9NQX1 630 aaPredicted RBP9.94□□□□□ -0.82
SMG6-216ENST00000575176 SH3GLB2Q9NR46 395 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 NAP1L2Q9ULW6 460 aaPredicted RBP9.94□□□□□ -0.82
SMG6-216ENST00000575176 EVPLQ92817 2033 aa9.94□□□□□ -0.82
SMG6-216ENST00000575176 NFASCO94856 1347 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 EMSYQ7Z589 1322 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 GSTTP1A0A1W2PQM5 241 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 SPDYE3A6NKU9 549 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 JAK2O60674 1132 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 DEXIO95424 95 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 TIMP1P01033 207 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 CIITAP33076 1130 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 MKRN4PQ13434 485 aaPredicted RBP9.93□□□□□ -0.82
SMG6-216ENST00000575176 MBTPS1Q14703 1052 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 TCTN1Q2MV58 587 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 LRIT3Q3SXY7 679 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 GNPTABQ3T906 1256 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 CEP55Q53EZ4 464 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 JAKMIP3Q5VZ66 844 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 B3GNT9Q6UX72 402 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 CYFIP1Q7L576 1253 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 NIPA1Q7RTP0 329 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 TDHQ8IZJ6 230 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 REXO1Q8N1G1 1221 aaKnown RBP9.93□□□□□ -0.82
SMG6-216ENST00000575176 SPATA33Q96N06 139 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 SEZ6LQ9BYH1 1024 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 AGO4Q9HCK5 861 aaKnown RBP9.93□□□□□ -0.82
SMG6-216ENST00000575176 KCNH7Q9NS40 1196 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 GTF2IRD1Q9UHL9 959 aa9.93□□□□□ -0.82
SMG6-216ENST00000575176 NLRC5Q86WI3 1866 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 IGKV6D-21A0A0A0MT36 114 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 FAM205CA6NFA0 338 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 WNT7AO00755 349 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 KPNA6O60684 536 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 LGR5O75473 907 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 FOSP01100 380 aaPredicted RBP9.92□□□□□ -0.82
SMG6-216ENST00000575176 CYP2C9P11712 490 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 CYP2C18P33260 490 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 PSEN2P49810 448 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 NEK4P51957 841 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 PTPN11Q06124 597 aaPredicted RBP9.92□□□□□ -0.82
SMG6-216ENST00000575176 MTMR1Q13613 665 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 MFSD10Q14728 455 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 SHHQ15465 462 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 DGKDQ16760 1214 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 KIAA0753Q2KHM9 967 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 MFSD5Q6N075 450 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 DHX37Q8IY37 1157 aaKnown RBP9.92□□□□□ -0.82
SMG6-216ENST00000575176 FAM177A1Q8N128 213 aaPredicted RBP9.92□□□□□ -0.82
SMG6-216ENST00000575176 OXER1Q8TDS5 423 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 LRCH3Q96II8 777 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 TBC1D32Q96NH3 1257 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 OSBPL7Q9BZF2 842 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 HDAC6Q9UBN7 1215 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 PCDHA4Q9UN74 947 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 KCNJ14Q9UNX9 436 aa9.92□□□□□ -0.82
SMG6-216ENST00000575176 DCDC2CA8MYV0 355 aa9.91□□□□□ -0.82
SMG6-216ENST00000575176 ZEB2O60315 1214 aa9.91□□□□□ -0.82
SMG6-216ENST00000575176 PPFIA4O75335 1185 aa9.91□□□□□ -0.82
SMG6-216ENST00000575176 ATG7O95352 703 aa9.91□□□□□ -0.82
SMG6-216ENST00000575176 CSF2RAP15509 400 aa9.91□□□□□ -0.82
SMG6-216ENST00000575176 ZNF200P98182 395 aaPredicted RBP9.91□□□□□ -0.82
SMG6-216ENST00000575176 NEDD9Q14511 834 aa9.91□□□□□ -0.82
SMG6-216ENST00000575176 TMEM240Q5SV17 173 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms