RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 USP17L18D6R9N7 530 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 USP17L22D6RA61 530 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 USP17L17D6RBQ6 530 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 USP17L19D6RCP7 530 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 USP17L20D6RJB6 530 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 SLURP2P0DP57 97 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 CYP11B2P19099 503 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 GFPT1Q06210 699 aaPredicted RBP9.89□□□□□ -0.83
NCBP3-204ENST00000574911 USP17L24Q0WX57 530 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 NFIAQ12857 509 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 USP17L6PQ6QN14 398 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 GPBP1Q86WP2 473 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 TRIM59Q8IWR1 403 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 RNF10Q8N5U6 811 aaKnown RBP9.89□□□□□ -0.83
NCBP3-204ENST00000574911 TEKT1Q969V4 418 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 ALS2CR12Q96Q35 445 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 ANO3Q9BYT9 981 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 TANGO6Q9C0B7 1094 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 SALL4Q9UJQ4 1053 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 HYOU1Q9Y4L1 999 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 ANKRD31Q8N7Z5 1873 aa9.89□□□□□ -0.83
NCBP3-204ENST00000574911 MYH7BA7E2Y1 1941 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 NPHP3-ACAD11A0A0J9YXS1 232 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 POTEB3A0JP26 581 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 POTECB2RU33 542 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 TLR2O60603 784 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 ZMYND10O75800 440 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 SERPING1P05155 500 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 SSBP05455 408 aaKnown RBP eCLIP9.88□□□□□ -0.83
NCBP3-204ENST00000574911 MYBL2P10244 700 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 TCP1P17987 556 aaKnown RBP9.88□□□□□ -0.83
NCBP3-204ENST00000574911 TNNT3P45378 269 aaPredicted RBP9.88□□□□□ -0.83
NCBP3-204ENST00000574911 SLC12A3P55017 1021 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 ARSHQ5FYA8 562 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 FAM83BQ5T0W9 1011 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 POTEBQ6S5H4 581 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 MOXD1Q6UVY6 613 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 GOLGA5Q8TBA6 731 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 SCFD1Q8WVM8 642 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 CRYGNQ8WXF5 182 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 LSM14BQ9BX40 385 aaKnown RBP9.88□□□□□ -0.83
NCBP3-204ENST00000574911 TBC1D7Q9P0N9 293 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 MED24O75448 989 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 PRPF6O94906 941 aaKnown RBP9.88□□□□□ -0.83
NCBP3-204ENST00000574911 EEF2P13639 858 aaKnown RBP9.88□□□□□ -0.83
NCBP3-204ENST00000574911 ERCC3P19447 782 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 ACTN2P35609 894 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 RASSF7Q02833 373 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 ZSCAN26Q16670 478 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 SLC9C1Q4G0N8 1177 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 SFMBT2Q5VUG0 894 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 NFRKBQ6P4R8 1299 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 GPIHBP1Q8IV16 184 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 SPATA4Q8NEY3 305 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 AENQ8WTP8 325 aaKnown RBP9.88□□□□□ -0.83
NCBP3-204ENST00000574911 ZBTB9Q96C00 473 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 DRC1Q96MC2 740 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 NYAP2Q9P242 653 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 PCDHA1Q9Y5I3 950 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 MYH4Q9Y623 1939 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 SIPA1L1O43166 1804 aa9.88□□□□□ -0.83
NCBP3-204ENST00000574911 PITPNM2Q9BZ72 1349 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 MEIS2O14770 477 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 NPR1P16066 1061 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 STAT3P40763 770 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 SLC1A4P43007 532 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 CRKP46108 304 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 AP3B2Q13367 1082 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 CDC37Q16543 378 aaPredicted RBP9.87□□□□□ -0.83
NCBP3-204ENST00000574911 HERC4Q5GLZ8 1057 aaPredicted RBP9.87□□□□□ -0.83
NCBP3-204ENST00000574911 KLHDC7AQ5VTJ3 777 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 SLFN13Q68D06 897 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 CCDC70Q6NSX1 233 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 NELFCDQ8IXH7 590 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 GSPT2Q8IYD1 628 aaKnown RBP9.87□□□□□ -0.83
NCBP3-204ENST00000574911 SLFN12Q8IYM2 578 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 ZDHHC15Q96MV8 337 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 SELENOOQ9BVL4 669 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 TLR10Q9BXR5 811 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 NLRC4Q9NPP4 1024 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 EMILIN3Q9NT22 766 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 FAM184BQ9ULE4 1060 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 NRXN2Q9P2S2 1712 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 NCK2O43639 380 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 RPS6KA5O75582 802 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 CACNB1Q02641 598 aaPredicted RBP9.87□□□□□ -0.83
NCBP3-204ENST00000574911 SPIRE1Q08AE8 756 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 EZH2Q15910 746 aaKnown RBP9.87□□□□□ -0.83
NCBP3-204ENST00000574911 EDRF1Q3B7T1 1238 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 Q4G0T1 1027 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 PPP4R3CPQ6ZMV5 832 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 SIAH1Q8IUQ4 282 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 ETNPPLQ8TBG4 499 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 NOX5Q96PH1 765 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 UIMC1Q96RL1 719 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 P2RX7Q99572 595 aaKnown RBP9.87□□□□□ -0.83
NCBP3-204ENST00000574911 LRRC1Q9BTT6 524 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 MRIQ9BWK5 157 aa9.87□□□□□ -0.83
NCBP3-204ENST00000574911 DHX36Q9H2U1 1008 aaKnown RBP9.87□□□□□ -0.83
NCBP3-204ENST00000574911 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms