RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 ZKSCAN3Q9BRR0 538 aa13.9□□□□□ -0.18
CTNS-208ENST00000574218 VAT1LQ9HCJ6 419 aa13.9□□□□□ -0.18
CTNS-208ENST00000574218 TRIM6-TRIM34B2RNG4 842 aa13.89□□□□□ -0.19
CTNS-208ENST00000574218 NOP56O00567 594 aaKnown RBP13.89□□□□□ -0.19
CTNS-208ENST00000574218 PARP1P09874 1014 aaKnown RBP13.89□□□□□ -0.19
CTNS-208ENST00000574218 HOXD8P13378 290 aaPredicted RBP13.89□□□□□ -0.19
CTNS-208ENST00000574218 NT5C2P49902 561 aa13.89□□□□□ -0.19
CTNS-208ENST00000574218 PTPN5P54829 565 aa13.89□□□□□ -0.19
CTNS-208ENST00000574218 MFAP1P55081 439 aaKnown RBP13.89□□□□□ -0.19
CTNS-208ENST00000574218 SMAD4Q13485 552 aaKnown RBP13.89□□□□□ -0.19
CTNS-208ENST00000574218 SMAD2Q15796 467 aaKnown RBP13.89□□□□□ -0.19
CTNS-208ENST00000574218 CELF3Q5SZQ8 465 aaKnown RBP13.89□□□□□ -0.19
CTNS-208ENST00000574218 MYSM1Q5VVJ2 828 aa13.89□□□□□ -0.19
CTNS-208ENST00000574218 SUGP1Q8IWZ8 645 aaKnown RBP13.89□□□□□ -0.19
CTNS-208ENST00000574218 IGFLR1Q9H665 355 aa13.89□□□□□ -0.19
CTNS-208ENST00000574218 MUTYHQ9UIF7 546 aa13.89□□□□□ -0.19
CTNS-208ENST00000574218 KIAA1671Q9BY89 1806 aa13.88□□□□□ -0.19
CTNS-208ENST00000574218 TECTAO75443 2155 aa13.88□□□□□ -0.19
CTNS-208ENST00000574218 H3BRB1 525 aa13.88□□□□□ -0.19
CTNS-208ENST00000574218 STXBP3O00186 592 aa13.88□□□□□ -0.19
CTNS-208ENST00000574218 MBTPS2O43462 519 aa13.88□□□□□ -0.19
CTNS-208ENST00000574218 CCND2P30279 289 aa13.88□□□□□ -0.19
CTNS-208ENST00000574218 MKRN4PQ13434 485 aaPredicted RBP13.88□□□□□ -0.19
CTNS-208ENST00000574218 COL19A1Q14993 1142 aa13.88□□□□□ -0.19
CTNS-208ENST00000574218 PKN1Q16512 942 aa13.88□□□□□ -0.19
CTNS-208ENST00000574218 HSDL1Q3SXM5 330 aa13.88□□□□□ -0.19
CTNS-208ENST00000574218 HERC4Q5GLZ8 1057 aaPredicted RBP13.88□□□□□ -0.19
CTNS-208ENST00000574218 RNF135Q8IUD6 432 aa13.88□□□□□ -0.19
CTNS-208ENST00000574218 PDCD2LQ9BRP1 358 aa13.88□□□□□ -0.19
CTNS-208ENST00000574218 AMNQ9BXJ7 453 aa13.88□□□□□ -0.19
CTNS-208ENST00000574218 TUT1Q9H6E5 874 aaKnown RBP13.88□□□□□ -0.19
CTNS-208ENST00000574218 CD207Q9UJ71 328 aa13.88□□□□□ -0.19
CTNS-208ENST00000574218 WDFY4Q6ZS81 3184 aa13.88□□□□□ -0.19
CTNS-208ENST00000574218 A0A0D9SFI3 127 aa13.87□□□□□ -0.19
CTNS-208ENST00000574218 ZNF213O14771 459 aa13.87□□□□□ -0.19
CTNS-208ENST00000574218 TREHO43280 583 aa13.87□□□□□ -0.19
CTNS-208ENST00000574218 CSPG5O95196 566 aa13.87□□□□□ -0.19
CTNS-208ENST00000574218 SMIM10L2AP0DMW4 78 aa13.87□□□□□ -0.19
CTNS-208ENST00000574218 SMIM10L2BP0DMW5 78 aa13.87□□□□□ -0.19
CTNS-208ENST00000574218 TGFB3P10600 412 aa13.87□□□□□ -0.19
CTNS-208ENST00000574218 UBA1P22314 1058 aaKnown RBP13.87□□□□□ -0.19
CTNS-208ENST00000574218 NDUFV1P49821 464 aa13.87□□□□□ -0.19
CTNS-208ENST00000574218 GNPTABQ3T906 1256 aa13.87□□□□□ -0.19
CTNS-208ENST00000574218 FAM227BQ96M60 508 aa13.87□□□□□ -0.19
CTNS-208ENST00000574218 MAP3K20Q9NYL2 800 aaKnown RBP13.87□□□□□ -0.19
CTNS-208ENST00000574218 ZNF215Q9UL58 517 aaPredicted RBP13.87□□□□□ -0.19
CTNS-208ENST00000574218 ADGRA3Q8IWK6 1321 aa13.87□□□□□ -0.19
CTNS-208ENST00000574218 LOXHD1Q8IVV2 1947 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 C5orf42Q9H799 3197 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.86□□□□□ -0.19
CTNS-208ENST00000574218 ST18O60284 1047 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 LGALS2P05162 132 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 BMPR1AP36894 532 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 LTBRP36941 435 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 HSD17B4P51659 736 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 HYAL1Q12794 435 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 TRAF1Q13077 416 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 HIC1Q14526 733 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 TICAM2Q86XR7 235 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 TBC1D10CQ8IV04 446 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 SAMD3Q8N6K7 520 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 EDAQ92838 391 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 PBXIP1Q96AQ6 731 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 C16orf70Q9BSU1 422 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 JMJD4Q9H9V9 463 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 KMT2EQ8IZD2 1858 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 NEDD4P46934 1319 aa13.86□□□□□ -0.19
CTNS-208ENST00000574218 TTC3P53804 2025 aa13.85□□□□□ -0.19
CTNS-208ENST00000574218 TMEM221A6NGB7 291 aa13.85□□□□□ -0.19
CTNS-208ENST00000574218 C5orf67F2Z3F1 127 aa13.85□□□□□ -0.19
CTNS-208ENST00000574218 M0R296 226 aa13.85□□□□□ -0.19
CTNS-208ENST00000574218 GRM6O15303 877 aa13.85□□□□□ -0.19
CTNS-208ENST00000574218 KDM4AO75164 1064 aa13.85□□□□□ -0.19
CTNS-208ENST00000574218 ARHGAP4P98171 946 aa13.85□□□□□ -0.19
CTNS-208ENST00000574218 NMIQ13287 307 aaPredicted RBP13.85□□□□□ -0.19
CTNS-208ENST00000574218 BTG3Q14201 252 aaPredicted RBP13.85□□□□□ -0.19
CTNS-208ENST00000574218 PGM5Q15124 567 aa13.85□□□□□ -0.19
CTNS-208ENST00000574218 CTC1Q2NKJ3 1217 aa13.85□□□□□ -0.19
CTNS-208ENST00000574218 ANKRD45Q5TZF3 282 aa13.85□□□□□ -0.19
CTNS-208ENST00000574218 USP26Q9BXU7 913 aa13.85□□□□□ -0.19
CTNS-208ENST00000574218 RNPEPQ9H4A4 650 aa13.85□□□□□ -0.19
CTNS-208ENST00000574218 BAZ2BQ9UIF8 2168 aaKnown RBP13.85□□□□□ -0.19
CTNS-208ENST00000574218 GCOM1H8Y6P7 765 aaPredicted RBP13.84□□□□□ -0.19
CTNS-208ENST00000574218 MMP1P03956 469 aa13.84□□□□□ -0.19
CTNS-208ENST00000574218 POLR2MP0CAP2 368 aa13.84□□□□□ -0.19
CTNS-208ENST00000574218 DLX2Q07687 328 aaPredicted RBP13.84□□□□□ -0.19
CTNS-208ENST00000574218 NEDD9Q14511 834 aa13.84□□□□□ -0.19
CTNS-208ENST00000574218 STOX1Q6ZVD7 989 aa13.84□□□□□ -0.19
CTNS-208ENST00000574218 BMP8AQ7Z5Y6 402 aa13.84□□□□□ -0.19
CTNS-208ENST00000574218 RSPH3Q86UC2 560 aa13.84□□□□□ -0.19
CTNS-208ENST00000574218 ZNF589Q86UQ0 364 aaPredicted RBP13.84□□□□□ -0.19
CTNS-208ENST00000574218 VSIG10LQ86VR7 867 aa13.84□□□□□ -0.19
CTNS-208ENST00000574218 ZSCAN10Q96SZ4 725 aaPredicted RBP13.84□□□□□ -0.19
CTNS-208ENST00000574218 UBAC1Q9BSL1 405 aa13.84□□□□□ -0.19
CTNS-208ENST00000574218 PLVAPQ9BX97 442 aa13.84□□□□□ -0.19
CTNS-208ENST00000574218 PCDHA1Q9Y5I3 950 aa13.84□□□□□ -0.19
CTNS-208ENST00000574218 TRIOO75962 3097 aa13.84□□□□□ -0.19
CTNS-208ENST00000574218 TBX10O75333 385 aa13.83□□□□□ -0.2
CTNS-208ENST00000574218 RGS20O76081 388 aa13.83□□□□□ -0.2
CTNS-208ENST00000574218 HOXA13P31271 388 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms