RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 H3BRB1 525 aa25.43■■□□□ 1.66
SNF8-216ENST00000573795 EFCAB14O75071 495 aa25.43■■□□□ 1.66
SNF8-216ENST00000573795 ERVK-21P61565 698 aa25.43■■□□□ 1.66
SNF8-216ENST00000573795 OSBPL7Q9BZF2 842 aa25.43■■□□□ 1.66
SNF8-216ENST00000573795 TUT1Q9H6E5 874 aaKnown RBP25.43■■□□□ 1.66
SNF8-216ENST00000573795 SUGCTQ9HAC7 445 aa25.43■■□□□ 1.66
SNF8-216ENST00000573795 C17orf102A2RUQ5 167 aa25.42■■□□□ 1.66
SNF8-216ENST00000573795 SMIM10L2AP0DMW4 78 aa25.42■■□□□ 1.66
SNF8-216ENST00000573795 SMIM10L2BP0DMW5 78 aa25.42■■□□□ 1.66
SNF8-216ENST00000573795 THPOP40225 353 aa25.42■■□□□ 1.66
SNF8-216ENST00000573795 FAM117BQ6P1L5 589 aa25.42■■□□□ 1.66
SNF8-216ENST00000573795 DBF4BQ8NFT6 615 aa25.42■■□□□ 1.66
SNF8-216ENST00000573795 PIBF1Q8WXW3 757 aa25.42■■□□□ 1.66
SNF8-216ENST00000573795 RAPGEFL1Q9UHV5 662 aa25.42■■□□□ 1.66
SNF8-216ENST00000573795 MTUS1Q9ULD2 1270 aa25.42■■□□□ 1.66
SNF8-216ENST00000573795 EMSYQ7Z589 1322 aa25.41■■□□□ 1.66
SNF8-216ENST00000573795 RSPH10B2B2RC85 870 aa25.41■■□□□ 1.66
SNF8-216ENST00000573795 SPATA31C2B4DYI2 1134 aa25.41■■□□□ 1.66
SNF8-216ENST00000573795 TREHO43280 583 aa25.41■■□□□ 1.66
SNF8-216ENST00000573795 RSPH10BP0C881 870 aa25.41■■□□□ 1.66
SNF8-216ENST00000573795 COL9A3Q14050 684 aaPredicted RBP25.41■■□□□ 1.66
SNF8-216ENST00000573795 SART3Q15020 963 aaKnown RBP25.41■■□□□ 1.66
SNF8-216ENST00000573795 PLEKHG4Q58EX7 1191 aa25.41■■□□□ 1.66
SNF8-216ENST00000573795 METTL7BQ6UX53 244 aa25.41■■□□□ 1.66
SNF8-216ENST00000573795 CATIPQ7Z7H3 387 aa25.41■■□□□ 1.66
SNF8-216ENST00000573795 MAP4K1Q92918 833 aa25.41■■□□□ 1.66
SNF8-216ENST00000573795 ATP6V0A1Q93050 837 aa25.41■■□□□ 1.66
SNF8-216ENST00000573795 TGS1Q96RS0 853 aaKnown RBP25.41■■□□□ 1.66
SNF8-216ENST00000573795 GPR20Q99678 358 aa25.41■■□□□ 1.66
SNF8-216ENST00000573795 MYL10Q9BUA6 226 aa25.41■■□□□ 1.66
SNF8-216ENST00000573795 RNPEPQ9H4A4 650 aa25.41■■□□□ 1.66
SNF8-216ENST00000573795 LY9Q9HBG7 655 aa25.41■■□□□ 1.66
SNF8-216ENST00000573795 LMCD1Q9NZU5 365 aa25.41■■□□□ 1.66
SNF8-216ENST00000573795 SUPT16HQ9Y5B9 1047 aaKnown RBP25.41■■□□□ 1.66
SNF8-216ENST00000573795 STAM2O75886 525 aa25.4■■□□□ 1.66
SNF8-216ENST00000573795 GNPTABQ3T906 1256 aa25.4■■□□□ 1.66
SNF8-216ENST00000573795 CYFIP1Q7L576 1253 aa25.4■■□□□ 1.66
SNF8-216ENST00000573795 HLA-CQ95604 372 aa25.4■■□□□ 1.66
SNF8-216ENST00000573795 SPZ1Q9BXG8 430 aa25.4■■□□□ 1.66
SNF8-216ENST00000573795 RTEL1Q9NZ71 1219 aa25.4■■□□□ 1.66
SNF8-216ENST00000573795 USP17L6PQ6QN14 398 aa25.39■■□□□ 1.66
SNF8-216ENST00000573795 TRIM50Q86XT4 487 aa25.39■■□□□ 1.66
SNF8-216ENST00000573795 ZNF654Q8IZM8 581 aa25.39■■□□□ 1.66
SNF8-216ENST00000573795 MAP3K14Q99558 947 aa25.39■■□□□ 1.66
SNF8-216ENST00000573795 RBM8AQ9Y5S9 174 aaKnown RBP25.39■■□□□ 1.66
SNF8-216ENST00000573795 MEIS2O14770 477 aa25.38■■□□□ 1.65
SNF8-216ENST00000573795 FIBPO43427 364 aa25.38■■□□□ 1.65
SNF8-216ENST00000573795 HTRA4P83105 476 aaPredicted RBP25.38■■□□□ 1.65
SNF8-216ENST00000573795 NEDD9Q14511 834 aa25.38■■□□□ 1.65
SNF8-216ENST00000573795 SP7Q8TDD2 431 aaPredicted RBP25.38■■□□□ 1.65
SNF8-216ENST00000573795 NOP56O00567 594 aaKnown RBP25.37■■□□□ 1.65
SNF8-216ENST00000573795 DDAH1O94760 285 aa25.37■■□□□ 1.65
SNF8-216ENST00000573795 ADAM17P78536 824 aa25.37■■□□□ 1.65
SNF8-216ENST00000573795 MYOCDQ8IZQ8 938 aa25.37■■□□□ 1.65
SNF8-216ENST00000573795 C17orf80Q9BSJ5 609 aa25.37■■□□□ 1.65
SNF8-216ENST00000573795 USP26Q9BXU7 913 aa25.37■■□□□ 1.65
SNF8-216ENST00000573795 SETD4Q9NVD3 440 aa25.37■■□□□ 1.65
SNF8-216ENST00000573795 COL4A6Q14031 1691 aa25.36■■□□□ 1.65
SNF8-216ENST00000573795 PIK3CDO00329 1044 aa25.36■■□□□ 1.65
SNF8-216ENST00000573795 PLEKHA8P1O95397 391 aa25.36■■□□□ 1.65
SNF8-216ENST00000573795 AMHP03971 560 aa25.36■■□□□ 1.65
SNF8-216ENST00000573795 CTSHP09668 335 aa25.36■■□□□ 1.65
SNF8-216ENST00000573795 PCNX4Q63HM2 1172 aa25.36■■□□□ 1.65
SNF8-216ENST00000573795 INSL6Q9Y581 213 aa25.36■■□□□ 1.65
SNF8-216ENST00000573795 CAND2O75155 1236 aa25.35■■□□□ 1.65
SNF8-216ENST00000573795 SMARCA1P28370 1054 aa25.35■■□□□ 1.65
SNF8-216ENST00000573795 SRBD1Q8N5C6 995 aaKnown RBP25.35■■□□□ 1.65
SNF8-216ENST00000573795 CTCFLQ8NI51 663 aaPredicted RBP25.35■■□□□ 1.65
SNF8-216ENST00000573795 SMARCC2Q8TAQ2 1214 aa25.35■■□□□ 1.65
SNF8-216ENST00000573795 RRP36Q96EU6 259 aaKnown RBP25.35■■□□□ 1.65
SNF8-216ENST00000573795 SENP7Q9BQF6 1050 aa25.35■■□□□ 1.65
SNF8-216ENST00000573795 NLRC5Q86WI3 1866 aa25.34■■□□□ 1.65
SNF8-216ENST00000573795 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.34■■□□□ 1.65
SNF8-216ENST00000573795 SH2B2O14492 632 aaPredicted RBP25.34■■□□□ 1.65
SNF8-216ENST00000573795 LMBR1Q8WVP7 490 aa25.34■■□□□ 1.65
SNF8-216ENST00000573795 PRC1O43663 620 aa25.33■■□□□ 1.65
SNF8-216ENST00000573795 IRX6P78412 446 aaPredicted RBP25.33■■□□□ 1.65
SNF8-216ENST00000573795 SP4Q02446 784 aa25.33■■□□□ 1.65
SNF8-216ENST00000573795 UTP14CQ5TAP6 766 aaKnown RBP25.33■■□□□ 1.65
SNF8-216ENST00000573795 XRRA1Q6P2D8 792 aa25.33■■□□□ 1.65
SNF8-216ENST00000573795 CMTR1Q8N1G2 835 aaKnown RBP25.33■■□□□ 1.65
SNF8-216ENST00000573795 SEPT8Q92599 483 aa25.33■■□□□ 1.65
SNF8-216ENST00000573795 KAT6AQ92794 2004 aa25.33■■□□□ 1.65
SNF8-216ENST00000573795 MTA3Q9BTC8 594 aa25.33■■□□□ 1.65
SNF8-216ENST00000573795 LSG1Q9H089 658 aaKnown RBP25.33■■□□□ 1.65
SNF8-216ENST00000573795 ATP9AO75110 1047 aa25.32■■□□□ 1.64
SNF8-216ENST00000573795 RXRAP19793 462 aa25.32■■□□□ 1.64
SNF8-216ENST00000573795 KIF5BP33176 963 aa25.32■■□□□ 1.64
SNF8-216ENST00000573795 FAM26DQ5JW98 314 aa25.32■■□□□ 1.64
SNF8-216ENST00000573795 FBXO22Q8NEZ5 403 aa25.32■■□□□ 1.64
SNF8-216ENST00000573795 CUL5Q93034 780 aa25.32■■□□□ 1.64
SNF8-216ENST00000573795 TOP1MTQ969P6 601 aa25.32■■□□□ 1.64
SNF8-216ENST00000573795 ZNF215Q9UL58 517 aaPredicted RBP25.32■■□□□ 1.64
SNF8-216ENST00000573795 ATG2AQ2TAZ0 1938 aa25.31■■□□□ 1.64
SNF8-216ENST00000573795 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.31■■□□□ 1.64
SNF8-216ENST00000573795 GNAT1P11488 350 aa25.31■■□□□ 1.64
SNF8-216ENST00000573795 KCNA2P16389 499 aa25.31■■□□□ 1.64
SNF8-216ENST00000573795 ARHGAP4P98171 946 aa25.31■■□□□ 1.64
SNF8-216ENST00000573795 KHSRPQ92945 711 aaKnown RBP eCLIP25.31■■□□□ 1.648e-7■□□□□ 9
SNF8-216ENST00000573795 LZTS2Q9BRK4 669 aa25.31■■□□□ 1.64
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