RNA–Protein interactions for RNA: ENST00000573123.1

CXCL16-202, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS ALT2 TSL 2

Gene CXCL16, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-202ENST00000573123 ATP6V0A1Q93050 837 aa20.43■□□□□ 0.86
CXCL16-202ENST00000573123 WNT8BQ93098 351 aa20.43■□□□□ 0.86
CXCL16-202ENST00000573123 TMEM87BQ96K49 555 aa20.43■□□□□ 0.86
CXCL16-202ENST00000573123 RAD9AQ99638 391 aa20.43■□□□□ 0.86
CXCL16-202ENST00000573123 ZNF215Q9UL58 517 aaPredicted RBP20.43■□□□□ 0.86
CXCL16-202ENST00000573123 PRRC2BQ5JSZ5 2229 aaKnown RBP20.42■□□□□ 0.86
CXCL16-202ENST00000573123 RSPH10B2B2RC85 870 aa20.42■□□□□ 0.86
CXCL16-202ENST00000573123 SPATA31C2B4DYI2 1134 aa20.42■□□□□ 0.86
CXCL16-202ENST00000573123 PIK3CDO00329 1044 aa20.42■□□□□ 0.86
CXCL16-202ENST00000573123 CAND2O75155 1236 aa20.42■□□□□ 0.86
CXCL16-202ENST00000573123 ARHGEF15O94989 841 aa20.42■□□□□ 0.86
CXCL16-202ENST00000573123 RSPH10BP0C881 870 aa20.42■□□□□ 0.86
CXCL16-202ENST00000573123 SMIM10L2AP0DMW4 78 aa20.42■□□□□ 0.86
CXCL16-202ENST00000573123 SMIM10L2BP0DMW5 78 aa20.42■□□□□ 0.86
CXCL16-202ENST00000573123 CALM1P0DP23 149 aa20.42■□□□□ 0.86
CXCL16-202ENST00000573123 CALM2P0DP24 149 aa20.42■□□□□ 0.86
CXCL16-202ENST00000573123 CALM3P0DP25 149 aa20.42■□□□□ 0.86
CXCL16-202ENST00000573123 GNAT1P11488 350 aa20.42■□□□□ 0.86
CXCL16-202ENST00000573123 MRPS9P82933 396 aaKnown RBP20.42■□□□□ 0.86
CXCL16-202ENST00000573123 CYFIP1Q7L576 1253 aa20.42■□□□□ 0.86
CXCL16-202ENST00000573123 NLRX1Q86UT6 975 aa20.42■□□□□ 0.86
CXCL16-202ENST00000573123 MYL10Q9BUA6 226 aa20.42■□□□□ 0.86
CXCL16-202ENST00000573123 COG5Q9UP83 839 aa20.42■□□□□ 0.86
CXCL16-202ENST00000573123 SH2B2O14492 632 aaPredicted RBP20.41■□□□□ 0.86
CXCL16-202ENST00000573123 HOXC8P31273 242 aa20.41■□□□□ 0.86
CXCL16-202ENST00000573123 GRB10Q13322 594 aa20.41■□□□□ 0.86
CXCL16-202ENST00000573123 MBTPS1Q14703 1052 aa20.41■□□□□ 0.86
CXCL16-202ENST00000573123 PCNX4Q63HM2 1172 aa20.41■□□□□ 0.86
CXCL16-202ENST00000573123 GIMAP8Q8ND71 665 aaPredicted RBP20.41■□□□□ 0.86
CXCL16-202ENST00000573123 SENP7Q9BQF6 1050 aa20.41■□□□□ 0.86
CXCL16-202ENST00000573123 RTEL1Q9NZ71 1219 aa20.41■□□□□ 0.86
CXCL16-202ENST00000573123 LCHNA4D1U4 455 aa20.4■□□□□ 0.86
CXCL16-202ENST00000573123 AMHP03971 560 aa20.4■□□□□ 0.86
CXCL16-202ENST00000573123 SEMA3FQ13275 785 aa20.4■□□□□ 0.86
CXCL16-202ENST00000573123 HIC1Q14526 733 aa20.4■□□□□ 0.86
CXCL16-202ENST00000573123 USP17L6PQ6QN14 398 aa20.4■□□□□ 0.86
CXCL16-202ENST00000573123 TMCO2Q7Z6W1 182 aaPredicted RBP20.4■□□□□ 0.86
CXCL16-202ENST00000573123 CDHR1Q96JP9 859 aa20.4■□□□□ 0.86
CXCL16-202ENST00000573123 TGS1Q96RS0 853 aaKnown RBP20.4■□□□□ 0.86
CXCL16-202ENST00000573123 GPR20Q99678 358 aa20.4■□□□□ 0.86
CXCL16-202ENST00000573123 LMCD1Q9NZU5 365 aa20.4■□□□□ 0.86
CXCL16-202ENST00000573123 MYH7BA7E2Y1 1941 aa20.39■□□□□ 0.86
CXCL16-202ENST00000573123 LIFRP42702 1097 aa20.39■□□□□ 0.85
CXCL16-202ENST00000573123 TCTN1Q2MV58 587 aa20.39■□□□□ 0.85
CXCL16-202ENST00000573123 SEPT8Q92599 483 aa20.39■□□□□ 0.85
CXCL16-202ENST00000573123 LSG1Q9H089 658 aaKnown RBP20.39■□□□□ 0.85
CXCL16-202ENST00000573123 RNPEPQ9H4A4 650 aa20.39■□□□□ 0.85
CXCL16-202ENST00000573123 MUC3AQ02505 3323 aa20.38■□□□□ 0.85
CXCL16-202ENST00000573123 TRANK1O15050 2925 aa20.38■□□□□ 0.85
CXCL16-202ENST00000573123 MEIS2O14770 477 aa20.38■□□□□ 0.85
CXCL16-202ENST00000573123 SLC27A2O14975 620 aa20.38■□□□□ 0.85
CXCL16-202ENST00000573123 TREHO43280 583 aa20.38■□□□□ 0.85
CXCL16-202ENST00000573123 PLEKHA8P1O95397 391 aa20.38■□□□□ 0.85
CXCL16-202ENST00000573123 ERVK-21P61565 698 aa20.38■□□□□ 0.85
CXCL16-202ENST00000573123 UTP14CQ5TAP6 766 aaKnown RBP20.38■□□□□ 0.85
CXCL16-202ENST00000573123 FAM117BQ6P1L5 589 aa20.38■□□□□ 0.85
CXCL16-202ENST00000573123 DBF4BQ8NFT6 615 aa20.38■□□□□ 0.85
CXCL16-202ENST00000573123 GDPD5Q8WTR4 605 aa20.38■□□□□ 0.85
CXCL16-202ENST00000573123 GPRASP2Q96D09 838 aa20.38■□□□□ 0.85
CXCL16-202ENST00000573123 ESYT1Q9BSJ8 1104 aa20.38■□□□□ 0.85
CXCL16-202ENST00000573123 BCAS3Q9H6U6 928 aa20.38■□□□□ 0.85
CXCL16-202ENST00000573123 PSTPIP2Q9H939 334 aa20.38■□□□□ 0.85
CXCL16-202ENST00000573123 INSL6Q9Y581 213 aa20.38■□□□□ 0.85
CXCL16-202ENST00000573123 SLC12A7Q9Y666 1083 aa20.38■□□□□ 0.85
CXCL16-202ENST00000573123 LINC01553A4QN01 128 aa20.37■□□□□ 0.85
CXCL16-202ENST00000573123 SP4Q02446 784 aa20.37■□□□□ 0.85
CXCL16-202ENST00000573123 TFF2Q03403 129 aa20.37■□□□□ 0.85
CXCL16-202ENST00000573123 PLEKHG4Q58EX7 1191 aa20.37■□□□□ 0.85
CXCL16-202ENST00000573123 KRT40Q6A162 431 aa20.37■□□□□ 0.85
CXCL16-202ENST00000573123 MYOCDQ8IZQ8 938 aa20.37■□□□□ 0.85
CXCL16-202ENST00000573123 SRBD1Q8N5C6 995 aaKnown RBP20.37■□□□□ 0.85
CXCL16-202ENST00000573123 ANO2Q9NQ90 1003 aa20.37■□□□□ 0.85
CXCL16-202ENST00000573123 SETD4Q9NVD3 440 aa20.37■□□□□ 0.85
CXCL16-202ENST00000573123 BDP1A6H8Y1 2624 aa20.36■□□□□ 0.85
CXCL16-202ENST00000573123 SPDYE3A6NKU9 549 aa20.36■□□□□ 0.85
CXCL16-202ENST00000573123 LPXNO60711 386 aa20.36■□□□□ 0.85
CXCL16-202ENST00000573123 CTSHP09668 335 aa20.36■□□□□ 0.85
CXCL16-202ENST00000573123 BMP1P13497 986 aa20.36■□□□□ 0.85
CXCL16-202ENST00000573123 CREB3L3Q68CJ9 461 aa20.36■□□□□ 0.85
CXCL16-202ENST00000573123 SPRED2Q7Z698 418 aa20.36■□□□□ 0.85
CXCL16-202ENST00000573123 TRIM50Q86XT4 487 aa20.36■□□□□ 0.85
CXCL16-202ENST00000573123 HLA-CQ95604 372 aa20.36■□□□□ 0.85
CXCL16-202ENST00000573123 EHMT1Q9H9B1 1298 aa20.36■□□□□ 0.85
CXCL16-202ENST00000573123 MTUS1Q9ULD2 1270 aa20.36■□□□□ 0.85
CXCL16-202ENST00000573123 NRCAMQ92823 1304 aa20.35■□□□□ 0.85
CXCL16-202ENST00000573123 RXRAP19793 462 aa20.35■□□□□ 0.85
CXCL16-202ENST00000573123 ARHGAP4P98171 946 aa20.35■□□□□ 0.85
CXCL16-202ENST00000573123 RNF20Q5VTR2 975 aa20.35■□□□□ 0.85
CXCL16-202ENST00000573123 SYNE3Q6ZMZ3 975 aa20.35■□□□□ 0.85
CXCL16-202ENST00000573123 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.35■□□□□ 0.85
CXCL16-202ENST00000573123 APBB2Q92870 758 aa20.35■□□□□ 0.85
CXCL16-202ENST00000573123 PTPRSQ13332 1948 aa20.35■□□□□ 0.85
CXCL16-202ENST00000573123 KCNQ1P51787 676 aa20.34■□□□□ 0.85
CXCL16-202ENST00000573123 MKRN4PQ13434 485 aaPredicted RBP20.34■□□□□ 0.85
CXCL16-202ENST00000573123 TMTC3Q6ZXV5 915 aa20.34■□□□□ 0.85
CXCL16-202ENST00000573123 MICU3Q86XE3 530 aa20.34■□□□□ 0.85
CXCL16-202ENST00000573123 CMTR1Q8N1G2 835 aaKnown RBP20.34■□□□□ 0.85
CXCL16-202ENST00000573123 LMBR1Q8WVP7 490 aa20.34■□□□□ 0.85
CXCL16-202ENST00000573123 SUGCTQ9HAC7 445 aa20.34■□□□□ 0.85
CXCL16-202ENST00000573123 TCF7P36402 384 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms