RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 SEPT8Q92599 483 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 TOP1MTQ969P6 601 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 MRPL38Q96DV4 380 aaKnown RBP11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 ZFP91Q96JP5 570 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 SAMD11Q96NU1 681 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 USP26Q9BXU7 913 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 RNPEPQ9H4A4 650 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 BCAS3Q9H6U6 928 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 C11orf16Q9NQ32 467 aa11.43□□□□□ -0.58
TRAPPC1-205ENST00000572656 PNMA6FA0A0J9YX94 578 aa11.42□□□□□ -0.58
TRAPPC1-205ENST00000572656 SPATA31C2B4DYI2 1134 aa11.42□□□□□ -0.58
TRAPPC1-205ENST00000572656 NOP56O00567 594 aaKnown RBP11.42□□□□□ -0.58
TRAPPC1-205ENST00000572656 HOXD11P31277 338 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC1-205ENST00000572656 ICAM3P32942 547 aa11.42□□□□□ -0.58
TRAPPC1-205ENST00000572656 MRPS9P82933 396 aaKnown RBP11.42□□□□□ -0.58
TRAPPC1-205ENST00000572656 NEDD9Q14511 834 aa11.42□□□□□ -0.58
TRAPPC1-205ENST00000572656 PUS10Q3MIT2 529 aaKnown RBP11.42□□□□□ -0.58
TRAPPC1-205ENST00000572656 EPC2Q52LR7 807 aa11.42□□□□□ -0.58
TRAPPC1-205ENST00000572656 METTL7BQ6UX53 244 aa11.42□□□□□ -0.58
TRAPPC1-205ENST00000572656 FAM178BQ8IXR5 827 aa11.42□□□□□ -0.58
TRAPPC1-205ENST00000572656 INPP4AQ96PE3 977 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC1-205ENST00000572656 YME1L1Q96TA2 773 aa11.42□□□□□ -0.58
TRAPPC1-205ENST00000572656 IL25Q9H293 177 aa11.42□□□□□ -0.58
TRAPPC1-205ENST00000572656 NCOR1O75376 2440 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 MYO9BQ13459 2157 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 FRMPD4Q14CM0 1322 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 ERICH2A1L162 156 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 H3BNC9 293 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 IFIT3O14879 490 aaKnown RBP11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 CYTH3O43739 400 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 CTSHP09668 335 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 TROAPQ12815 778 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 GPM6BQ13491 265 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 TIGD5Q53EQ6 642 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 PTCRAQ6ISU1 281 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 CYFIP1Q7L576 1253 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 GJD3Q8N144 294 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 NEK9Q8TD19 979 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 APBB2Q92870 758 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 GPR20Q99678 358 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 OSBPL7Q9BZF2 842 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 SETD4Q9NVD3 440 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 U3KPZ7 1027 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 TET1Q8NFU7 2136 aa11.41□□□□□ -0.58
TRAPPC1-205ENST00000572656 COL4A4P53420 1690 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 FAM86C2PA6NEL3 165 aa11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 GRXCR2A6NFK2 248 aa11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 FIBPO43427 364 aa11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 UPP2O95045 317 aa11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 CYP21A2P08686 494 aa11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 IL9P15248 144 aa11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 ADAM17P78536 824 aa11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 SEMA3FQ13275 785 aa11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 WTAPQ15007 396 aa11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 SART3Q15020 963 aaKnown RBP11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 FAM26DQ5JW98 314 aa11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 XRRA1Q6P2D8 792 aa11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 TMEM192Q8IY95 271 aa11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 BANK1Q8NDB2 785 aa11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 SENP7Q9BQF6 1050 aa11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 IFIH1Q9BYX4 1025 aaKnown RBP11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 SENP2Q9HC62 589 aa11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 RTEL1Q9NZ71 1219 aa11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 ZNF215Q9UL58 517 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC1-205ENST00000572656 TCF20Q9UGU0 1960 aaKnown RBP11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 PRR33A8MZF0 331 aa11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 SSTR3P32745 418 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 COL19A1Q14993 1142 aa11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 TCEAL5Q5H9L2 206 aa11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 UTP14CQ5TAP6 766 aaKnown RBP11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 PCNX4Q63HM2 1172 aa11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 CATIPQ7Z7H3 387 aa11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 RALYLQ86SE5 291 aaKnown RBP11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 TRIM50Q86XT4 487 aa11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 LMBR1Q8WVP7 490 aa11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 RUFY2Q8WXA3 655 aa11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 PABPC5Q96DU9 382 aaKnown RBP11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 IL17RAQ96F46 866 aa11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 NSUN3Q9H649 340 aaKnown RBP11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 LAMA4Q16363 1823 aa11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 PTPRSQ13332 1948 aa11.39□□□□□ -0.59
TRAPPC1-205ENST00000572656 NRCAMQ92823 1304 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 E7EWF7 191 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 H3BQ06 376 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 PIK3CDO00329 1044 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 ALADP13716 330 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 GSPT1P15170 499 aaKnown RBP11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 ARHGAP4P98171 946 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 PTH1RQ03431 593 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 USP17L6PQ6QN14 398 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 RPAINQ86UA6 219 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 NLRX1Q86UT6 975 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 FIBCD1Q8N539 461 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 GIMAP8Q8ND71 665 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 NCOA7Q8NI08 942 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 EXOC6Q8TAG9 804 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 SMARCC2Q8TAQ2 1214 aa11.38□□□□□ -0.59
TRAPPC1-205ENST00000572656 PIBF1Q8WXW3 757 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms