RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 PTGDRQ13258 359 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 SEMA3FQ13275 785 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 MTFR1Q15390 333 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 TMEM266Q2M3C6 531 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 BRDTQ58F21 947 aaPredicted RBP10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 CELF3Q5SZQ8 465 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 TMEM63BQ5T3F8 832 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 GJC2Q5T442 439 aaPredicted RBP10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 CCDC62Q6P9F0 684 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 METTL7BQ6UX53 244 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 CYFIP1Q7L576 1253 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 TLK2Q86UE8 772 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 ETNPPLQ8TBG4 499 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 COPS5Q92905 334 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 SLC5A5Q92911 643 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 GJA10Q969M2 543 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 FAM20AQ96MK3 541 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 SPATA33Q96N06 139 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 DEFB118Q96PH6 123 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 USP28Q96RU2 1077 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 RIT2Q99578 217 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 SENP7Q9BQF6 1050 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 TMEM106CQ9BVX2 250 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 TEKT3Q9BXF9 490 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 FTOQ9C0B1 505 aaKnown RBP eCLIP10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 KCNMB3Q9NPA1 279 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 XPNPEP3Q9NQH7 507 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 TFIP11Q9UBB9 837 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 CLIC4Q9Y696 253 aa10.67□□□□□ -0.7
NPLOC4-208ENST00000572351 NFASCO94856 1347 aa10.66□□□□□ -0.7
NPLOC4-208ENST00000572351 C6orf222P0C671 652 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-208ENST00000572351 CPT1AP50416 773 aa10.66□□□□□ -0.7
NPLOC4-208ENST00000572351 KRT76Q01546 638 aa10.66□□□□□ -0.7
NPLOC4-208ENST00000572351 SP2Q02086 613 aa10.66□□□□□ -0.7
NPLOC4-208ENST00000572351 ITGB3BPQ13352 177 aaPredicted RBP10.66□□□□□ -0.7
NPLOC4-208ENST00000572351 ATL3Q6DD88 541 aa10.66□□□□□ -0.7
NPLOC4-208ENST00000572351 DTHD1Q6ZMT9 781 aa10.66□□□□□ -0.7
NPLOC4-208ENST00000572351 TMEM60Q9H2L4 133 aa10.66□□□□□ -0.7
NPLOC4-208ENST00000572351 POLR3EQ9NVU0 708 aa10.66□□□□□ -0.7
NPLOC4-208ENST00000572351 SLC9A2Q9UBY0 812 aa10.66□□□□□ -0.7
NPLOC4-208ENST00000572351 PCDHA12Q9UN75 941 aa10.66□□□□□ -0.7
NPLOC4-208ENST00000572351 GNEQ9Y223 722 aaKnown RBP10.66□□□□□ -0.7
NPLOC4-208ENST00000572351 Q9Y3F1 56 aa10.66□□□□□ -0.7
NPLOC4-208ENST00000572351 SAMM50Q9Y512 469 aa10.66□□□□□ -0.7
NPLOC4-208ENST00000572351 RBBP6Q7Z6E9 1792 aaKnown RBP10.66□□□□□ -0.7
NPLOC4-208ENST00000572351 ADCY6O43306 1168 aa10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 ZEB2O60315 1214 aa10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 FARP2O94887 1054 aaPredicted RBP10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 PGK1P00558 417 aa10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 PTGS1P23219 599 aa10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 TECP42680 631 aa10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 ATP2C1P98194 919 aaPredicted RBP10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 ARHGAP1Q07960 439 aa10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 FSCN1Q16658 493 aaKnown RBP10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 NCAPH2Q6IBW4 605 aa10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 MIS18BP1Q6P0N0 1132 aa10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 RNF180Q86T96 592 aa10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 AFG1LQ8WV93 481 aa10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 HAS1Q92839 578 aa10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 MTMR9Q96QG7 549 aa10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 RAB34Q9BZG1 259 aa10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 TTC12Q9H892 705 aaPredicted RBP10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 PAK6Q9NQU5 681 aaPredicted RBP10.65□□□□□ -0.7
NPLOC4-208ENST00000572351 ELP1O95163 1332 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 SYNRGQ9UMZ2 1314 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 VWA3AA6NCI4 1184 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 WDR64B1ANS9 1081 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 BACH1O14867 736 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 SPTLC2O15270 562 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 DHX15O43143 795 aaKnown RBP10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 PSMD10O75832 226 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 YEATS4O95619 227 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 TFRCP02786 760 aaKnown RBP10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 MARCKSP29966 332 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 SFNP31947 248 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 PRPHP41219 470 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 NASPP49321 788 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 JAK3P52333 1124 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 GJA9P57773 515 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 ACTR2P61160 394 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 GNASQ5JWF2 1037 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 COL13A1Q5TAT6 717 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 ARL6IP4Q66PJ3 421 aaKnown RBP10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 ZNF746Q6NUN9 644 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 MIER3Q7Z3K6 550 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 SMAP1Q8IYB5 467 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 ARRDC4Q8NCT1 418 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 PPTC7Q8NI37 304 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 ERMNQ8TAM6 284 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 KCNG4Q8TDN1 519 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 SEPT1Q8WYJ6 367 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 TNPO1Q92973 898 aaKnown RBP10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 EMID1Q96A84 441 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 FERMT2Q96AC1 680 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 SPATA32Q96LK8 384 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 SCAND2PQ9GZW5 306 aaPredicted RBP10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 UNC45AQ9H3U1 944 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 DISC1Q9NRI5 854 aa10.64□□□□□ -0.71
NPLOC4-208ENST00000572351 VAV3Q9UKW4 847 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms