RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 MYH7BA7E2Y1 1941 aa18.41■□□□□ 0.54
LITAF-210ENST00000571976 H0YGN5 161 aa18.4■□□□□ 0.54
LITAF-210ENST00000571976 NOP56O00567 594 aaKnown RBP18.4■□□□□ 0.54
LITAF-210ENST00000571976 MMP1P03956 469 aa18.4■□□□□ 0.54
LITAF-210ENST00000571976 KRT2P35908 639 aa18.4■□□□□ 0.54
LITAF-210ENST00000571976 PSMC6P62333 389 aa18.4■□□□□ 0.54
LITAF-210ENST00000571976 SETQ01105 290 aaPredicted RBP18.4■□□□□ 0.54
LITAF-210ENST00000571976 PRPF38BQ5VTL8 546 aaKnown RBP18.4■□□□□ 0.54
LITAF-210ENST00000571976 KRT40Q6A162 431 aa18.4■□□□□ 0.54
LITAF-210ENST00000571976 PLA2G4DQ86XP0 818 aa18.4■□□□□ 0.54
LITAF-210ENST00000571976 AGO4Q9HCK5 861 aaKnown RBP18.4■□□□□ 0.54
LITAF-210ENST00000571976 GRIN2DO15399 1336 aa18.4■□□□□ 0.54
LITAF-210ENST00000571976 IGLV3-22A0A075B6J6 115 aa18.39■□□□□ 0.53
LITAF-210ENST00000571976 CCDC194A0A1B0GVG4 234 aa18.39■□□□□ 0.53
LITAF-210ENST00000571976 DCDC2CA8MYV0 355 aa18.39■□□□□ 0.53
LITAF-210ENST00000571976 PQBP1O60828 265 aaKnown RBP18.39■□□□□ 0.53
LITAF-210ENST00000571976 OXER1Q8TDS5 423 aa18.39■□□□□ 0.53
LITAF-210ENST00000571976 C8orf76Q96K31 380 aa18.39■□□□□ 0.53
LITAF-210ENST00000571976 GPR20Q99678 358 aa18.39■□□□□ 0.53
LITAF-210ENST00000571976 SDF4Q9BRK5 362 aa18.39■□□□□ 0.53
LITAF-210ENST00000571976 PKD2L1Q9P0L9 805 aa18.39■□□□□ 0.53
LITAF-210ENST00000571976 NFASCO94856 1347 aa18.39■□□□□ 0.53
LITAF-210ENST00000571976 EDIL3O43854 480 aa18.38■□□□□ 0.53
LITAF-210ENST00000571976 PRR16Q569H4 304 aa18.38■□□□□ 0.53
LITAF-210ENST00000571976 KATNAL1Q9BW62 490 aa18.38■□□□□ 0.53
LITAF-210ENST00000571976 PRKAG2Q9UGJ0 569 aa18.38■□□□□ 0.53
LITAF-210ENST00000571976 KIF3AQ9Y496 699 aa18.38■□□□□ 0.53
LITAF-210ENST00000571976 TLR3O15455 904 aaKnown RBP18.37■□□□□ 0.53
LITAF-210ENST00000571976 F2P00734 622 aa18.37■□□□□ 0.53
LITAF-210ENST00000571976 CLTBP09497 229 aa18.37■□□□□ 0.53
LITAF-210ENST00000571976 FOSBP53539 338 aa18.37■□□□□ 0.53
LITAF-210ENST00000571976 SP4Q02446 784 aa18.37■□□□□ 0.53
LITAF-210ENST00000571976 PTPN11Q06124 597 aaPredicted RBP18.37■□□□□ 0.53
LITAF-210ENST00000571976 ITGB3BPQ13352 177 aaPredicted RBP18.37■□□□□ 0.53
LITAF-210ENST00000571976 SAFBQ15424 915 aaKnown RBP eCLIP18.37■□□□□ 0.53
LITAF-210ENST00000571976 NBPF20Q3BBV1 942 aa18.37■□□□□ 0.53
LITAF-210ENST00000571976 NFRKBQ6P4R8 1299 aa18.37■□□□□ 0.53
LITAF-210ENST00000571976 MOXD1Q6UVY6 613 aa18.37■□□□□ 0.53
LITAF-210ENST00000571976 PIK3AP1Q6ZUJ8 805 aa18.37■□□□□ 0.53
LITAF-210ENST00000571976 FAM126BQ8IXS8 530 aa18.37■□□□□ 0.53
LITAF-210ENST00000571976 DIS3L2Q8IYB7 885 aaKnown RBP18.37■□□□□ 0.53
LITAF-210ENST00000571976 SEPT1Q8WYJ6 367 aa18.37■□□□□ 0.53
LITAF-210ENST00000571976 KAT2BQ92831 832 aa18.37■□□□□ 0.53
LITAF-210ENST00000571976 ZNF577Q9BSK1 485 aa18.37■□□□□ 0.53
LITAF-210ENST00000571976 JPH1Q9HDC5 661 aaPredicted RBP18.37■□□□□ 0.53
LITAF-210ENST00000571976 ZMYND8Q9ULU4 1186 aaPredicted RBP18.37■□□□□ 0.53
LITAF-210ENST00000571976 CYP3A7-CYP3A51PA0A087WV96 503 aa18.36■□□□□ 0.53
LITAF-210ENST00000571976 BTBD18B2RXH4 712 aa18.36■□□□□ 0.53
LITAF-210ENST00000571976 IPO5O00410 1097 aaKnown RBP18.36■□□□□ 0.53
LITAF-210ENST00000571976 ZNF286BP0CG31 522 aa18.36■□□□□ 0.53
LITAF-210ENST00000571976 CYP3A7P24462 503 aa18.36■□□□□ 0.53
LITAF-210ENST00000571976 PSEN2P49810 448 aa18.36■□□□□ 0.53
LITAF-210ENST00000571976 FAAP100Q0VG06 881 aa18.36■□□□□ 0.53
LITAF-210ENST00000571976 NR5A1Q13285 461 aa18.36■□□□□ 0.53
LITAF-210ENST00000571976 INF2Q27J81 1249 aa18.36■□□□□ 0.53
LITAF-210ENST00000571976 NEK8Q86SG6 692 aa18.36■□□□□ 0.53
LITAF-210ENST00000571976 FBXO18Q8NFZ0 1043 aa18.36■□□□□ 0.53
LITAF-210ENST00000571976 TNFRSF25Q93038 417 aa18.36■□□□□ 0.53
LITAF-210ENST00000571976 C16orf70Q9BSU1 422 aa18.36■□□□□ 0.53
LITAF-210ENST00000571976 PRDM5Q9NQX1 630 aaPredicted RBP18.36■□□□□ 0.53
LITAF-210ENST00000571976 PDLIM7Q9NR12 457 aa18.36■□□□□ 0.53
LITAF-210ENST00000571976 TBC1D22BQ9NU19 505 aa18.36■□□□□ 0.53
LITAF-210ENST00000571976 SLC9A2Q9UBY0 812 aa18.36■□□□□ 0.53
LITAF-210ENST00000571976 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.36■□□□□ 0.53
LITAF-210ENST00000571976 SCN10AQ9Y5Y9 1956 aa18.35■□□□□ 0.53
LITAF-210ENST00000571976 HAS3O00219 553 aa18.35■□□□□ 0.53
LITAF-210ENST00000571976 CD4P01730 458 aa18.35■□□□□ 0.53
LITAF-210ENST00000571976 LGALS2P05162 132 aa18.35■□□□□ 0.53
LITAF-210ENST00000571976 SYN1P17600 705 aa18.35■□□□□ 0.53
LITAF-210ENST00000571976 CHMP4BP1P59074 171 aa18.35■□□□□ 0.53
LITAF-210ENST00000571976 GUCY1B3Q02153 619 aa18.35■□□□□ 0.53
LITAF-210ENST00000571976 LETM2Q2VYF4 491 aa18.35■□□□□ 0.53
LITAF-210ENST00000571976 Q4G0T1 1027 aa18.35■□□□□ 0.53
LITAF-210ENST00000571976 FAM47CQ5HY64 1035 aa18.35■□□□□ 0.53
LITAF-210ENST00000571976 SESTD1Q86VW0 696 aa18.35■□□□□ 0.53
LITAF-210ENST00000571976 LENG9Q96B70 501 aa18.35■□□□□ 0.53
LITAF-210ENST00000571976 NAP1L4Q99733 375 aaKnown RBP18.35■□□□□ 0.53
LITAF-210ENST00000571976 TMEM39AQ9NV64 488 aa18.35■□□□□ 0.53
LITAF-210ENST00000571976 TELO2Q9Y4R8 837 aa18.35■□□□□ 0.53
LITAF-210ENST00000571976 GSTTP1A0A1W2PQM5 241 aa18.34■□□□□ 0.53
LITAF-210ENST00000571976 H3BRB1 525 aa18.34■□□□□ 0.53
LITAF-210ENST00000571976 KIAA0355O15063 1070 aa18.34■□□□□ 0.53
LITAF-210ENST00000571976 TDP2O95551 362 aa18.34■□□□□ 0.53
LITAF-210ENST00000571976 SUPT20HL2P0C7V6 817 aa18.34■□□□□ 0.53
LITAF-210ENST00000571976 GCFC2P16383 781 aaKnown RBP18.34■□□□□ 0.53
LITAF-210ENST00000571976 TCF7P36402 384 aaPredicted RBP18.34■□□□□ 0.53
LITAF-210ENST00000571976 CUL4AQ13619 759 aa18.34■□□□□ 0.53
LITAF-210ENST00000571976 MFSD10Q14728 455 aa18.34■□□□□ 0.53
LITAF-210ENST00000571976 KIAA0753Q2KHM9 967 aa18.34■□□□□ 0.53
LITAF-210ENST00000571976 PPP4R3AQ6IN85 833 aa18.34■□□□□ 0.53
LITAF-210ENST00000571976 C7orf31Q8N865 590 aa18.34■□□□□ 0.53
LITAF-210ENST00000571976 MBOAT7Q96N66 472 aa18.34■□□□□ 0.53
LITAF-210ENST00000571976 TUT1Q9H6E5 874 aaKnown RBP18.34■□□□□ 0.53
LITAF-210ENST00000571976 DDX25Q9UHL0 483 aaKnown RBP18.34■□□□□ 0.53
LITAF-210ENST00000571976 ZNF215Q9UL58 517 aaPredicted RBP18.34■□□□□ 0.53
LITAF-210ENST00000571976 DOCK5Q9H7D0 1870 aa18.34■□□□□ 0.53
LITAF-210ENST00000571976 TRIM43BA6NCK2 446 aa18.33■□□□□ 0.52
LITAF-210ENST00000571976 MSH4O15457 936 aa18.33■□□□□ 0.52
LITAF-210ENST00000571976 DHX15O43143 795 aaKnown RBP18.33■□□□□ 0.52
LITAF-210ENST00000571976 B4GALT4O60513 344 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms