RNA–Protein interactions for RNA: ENST00000571714.5

NPLOC4-206, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-206ENST00000571714 HOMER1Q86YM7 354 aa12.93□□□□□ -0.34
NPLOC4-206ENST00000571714 GJD3Q8N144 294 aa12.93□□□□□ -0.34
NPLOC4-206ENST00000571714 NEK9Q8TD19 979 aa12.93□□□□□ -0.34
NPLOC4-206ENST00000571714 MRPL38Q96DV4 380 aaKnown RBP12.93□□□□□ -0.34
NPLOC4-206ENST00000571714 PIGSQ96S52 555 aa12.93□□□□□ -0.34
NPLOC4-206ENST00000571714 UBAC1Q9BSL1 405 aa12.93□□□□□ -0.34
NPLOC4-206ENST00000571714 RNPEPQ9H4A4 650 aa12.93□□□□□ -0.34
NPLOC4-206ENST00000571714 TUT1Q9H6E5 874 aaKnown RBP12.93□□□□□ -0.34
NPLOC4-206ENST00000571714 SENP2Q9HC62 589 aa12.93□□□□□ -0.34
NPLOC4-206ENST00000571714 TELO2Q9Y4R8 837 aa12.93□□□□□ -0.34
NPLOC4-206ENST00000571714 FRMPD4Q14CM0 1322 aa12.92□□□□□ -0.34
NPLOC4-206ENST00000571714 ATG2AQ2TAZ0 1938 aa12.92□□□□□ -0.34
NPLOC4-206ENST00000571714 IGHDP01880 384 aa12.92□□□□□ -0.34
NPLOC4-206ENST00000571714 CTSHP09668 335 aa12.92□□□□□ -0.34
NPLOC4-206ENST00000571714 TGFB3P10600 412 aa12.92□□□□□ -0.34
NPLOC4-206ENST00000571714 MRPS9P82933 396 aaKnown RBP12.92□□□□□ -0.34
NPLOC4-206ENST00000571714 SEMA3FQ13275 785 aa12.92□□□□□ -0.34
NPLOC4-206ENST00000571714 COL19A1Q14993 1142 aa12.92□□□□□ -0.34
NPLOC4-206ENST00000571714 PTCRAQ6ISU1 281 aaPredicted RBP12.92□□□□□ -0.34
NPLOC4-206ENST00000571714 SAMD3Q8N6K7 520 aa12.92□□□□□ -0.34
NPLOC4-206ENST00000571714 ATP6V0A1Q93050 837 aa12.92□□□□□ -0.34
NPLOC4-206ENST00000571714 TOP1MTQ969P6 601 aa12.92□□□□□ -0.34
NPLOC4-206ENST00000571714 RIOX1Q9H6W3 641 aa12.92□□□□□ -0.34
NPLOC4-206ENST00000571714 CNNM2Q9H8M5 875 aa12.92□□□□□ -0.34
NPLOC4-206ENST00000571714 BRWD1Q9NSI6 2320 aa12.92□□□□□ -0.34
NPLOC4-206ENST00000571714 NLRC5Q86WI3 1866 aa12.91□□□□□ -0.34
NPLOC4-206ENST00000571714 DOCK5Q9H7D0 1870 aa12.91□□□□□ -0.34
NPLOC4-206ENST00000571714 GRXCR2A6NFK2 248 aa12.91□□□□□ -0.34
NPLOC4-206ENST00000571714 H3BNC9 293 aa12.91□□□□□ -0.34
NPLOC4-206ENST00000571714 H3BQ06 376 aaPredicted RBP12.91□□□□□ -0.34
NPLOC4-206ENST00000571714 GCOM1H8Y6P7 765 aaPredicted RBP12.91□□□□□ -0.34
NPLOC4-206ENST00000571714 LINC00271P0C7V0 271 aa12.91□□□□□ -0.34
NPLOC4-206ENST00000571714 POLR2MP0CAP2 368 aa12.91□□□□□ -0.34
NPLOC4-206ENST00000571714 CCND2P30279 289 aa12.91□□□□□ -0.34
NPLOC4-206ENST00000571714 GRM4Q14833 912 aa12.91□□□□□ -0.34
NPLOC4-206ENST00000571714 FCHSD1Q86WN1 690 aa12.91□□□□□ -0.34
NPLOC4-206ENST00000571714 TRIM50Q86XT4 487 aa12.91□□□□□ -0.34
NPLOC4-206ENST00000571714 INPP4AQ96PE3 977 aaPredicted RBP12.91□□□□□ -0.34
NPLOC4-206ENST00000571714 MLXIPQ9HAP2 919 aa12.91□□□□□ -0.34
NPLOC4-206ENST00000571714 CTNNA3Q9UI47 895 aa12.91□□□□□ -0.34
NPLOC4-206ENST00000571714 RALGAPA2Q2PPJ7 1873 aa12.91□□□□□ -0.34
NPLOC4-206ENST00000571714 PRR33A8MZF0 331 aa12.9□□□□□ -0.34
NPLOC4-206ENST00000571714 HIP1O00291 1037 aa12.9□□□□□ -0.34
NPLOC4-206ENST00000571714 CAND2O75155 1236 aa12.9□□□□□ -0.34
NPLOC4-206ENST00000571714 ICAM3P32942 547 aa12.9□□□□□ -0.34
NPLOC4-206ENST00000571714 ADAM17P78536 824 aa12.9□□□□□ -0.34
NPLOC4-206ENST00000571714 TROAPQ12815 778 aa12.9□□□□□ -0.34
NPLOC4-206ENST00000571714 GPM6BQ13491 265 aa12.9□□□□□ -0.34
NPLOC4-206ENST00000571714 TIGD5Q53EQ6 642 aa12.9□□□□□ -0.34
NPLOC4-206ENST00000571714 BANK1Q8NDB2 785 aa12.9□□□□□ -0.34
NPLOC4-206ENST00000571714 SEPT8Q92599 483 aa12.9□□□□□ -0.34
NPLOC4-206ENST00000571714 SAMD11Q96NU1 681 aa12.9□□□□□ -0.34
NPLOC4-206ENST00000571714 YME1L1Q96TA2 773 aa12.9□□□□□ -0.34
NPLOC4-206ENST00000571714 GPR20Q99678 358 aa12.9□□□□□ -0.34
NPLOC4-206ENST00000571714 SETD4Q9NVD3 440 aa12.9□□□□□ -0.34
NPLOC4-206ENST00000571714 SUPT16HQ9Y5B9 1047 aaKnown RBP12.9□□□□□ -0.34
NPLOC4-206ENST00000571714 TAF6LQ9Y6J9 622 aa12.9□□□□□ -0.34
NPLOC4-206ENST00000571714 SPATA31C2B4DYI2 1134 aa12.89□□□□□ -0.35
NPLOC4-206ENST00000571714 UPP2O95045 317 aa12.89□□□□□ -0.35
NPLOC4-206ENST00000571714 CYP21A2P08686 494 aa12.89□□□□□ -0.35
NPLOC4-206ENST00000571714 PTPROQ16827 1216 aa12.89□□□□□ -0.35
NPLOC4-206ENST00000571714 TCEAL5Q5H9L2 206 aa12.89□□□□□ -0.35
NPLOC4-206ENST00000571714 FAM26DQ5JW98 314 aa12.89□□□□□ -0.35
NPLOC4-206ENST00000571714 METTL7BQ6UX53 244 aa12.89□□□□□ -0.35
NPLOC4-206ENST00000571714 CYFIP1Q7L576 1253 aa12.89□□□□□ -0.35
NPLOC4-206ENST00000571714 TMEM192Q8IY95 271 aa12.89□□□□□ -0.35
NPLOC4-206ENST00000571714 LMBR1Q8WVP7 490 aa12.89□□□□□ -0.35
NPLOC4-206ENST00000571714 PABPC5Q96DU9 382 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-206ENST00000571714 USP26Q9BXU7 913 aa12.89□□□□□ -0.35
NPLOC4-206ENST00000571714 RWDD1Q9H446 243 aaPredicted RBP12.89□□□□□ -0.35
NPLOC4-206ENST00000571714 RC3H2Q9HBD1 1191 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-206ENST00000571714 PNMA6FA0A0J9YX94 578 aa12.88□□□□□ -0.35
NPLOC4-206ENST00000571714 NOP56O00567 594 aaKnown RBP12.88□□□□□ -0.35
NPLOC4-206ENST00000571714 FIBPO43427 364 aa12.88□□□□□ -0.35
NPLOC4-206ENST00000571714 SSTR3P32745 418 aaPredicted RBP12.88□□□□□ -0.35
NPLOC4-206ENST00000571714 LTBRP36941 435 aa12.88□□□□□ -0.35
NPLOC4-206ENST00000571714 GNPTABQ3T906 1256 aa12.88□□□□□ -0.35
NPLOC4-206ENST00000571714 IFIH1Q9BYX4 1025 aaKnown RBP12.88□□□□□ -0.35
NPLOC4-206ENST00000571714 RTEL1Q9NZ71 1219 aa12.88□□□□□ -0.35
NPLOC4-206ENST00000571714 C5orf67F2Z3F1 127 aa12.87□□□□□ -0.35
NPLOC4-206ENST00000571714 STAM2O75886 525 aa12.87□□□□□ -0.35
NPLOC4-206ENST00000571714 CHRNA1P02708 482 aa12.87□□□□□ -0.35
NPLOC4-206ENST00000571714 GSPT1P15170 499 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-206ENST00000571714 ARHGAP4P98171 946 aa12.87□□□□□ -0.35
NPLOC4-206ENST00000571714 ZP2Q05996 745 aa12.87□□□□□ -0.35
NPLOC4-206ENST00000571714 MGAT3Q09327 533 aa12.87□□□□□ -0.35
NPLOC4-206ENST00000571714 AAMPQ13685 434 aa12.87□□□□□ -0.35
NPLOC4-206ENST00000571714 NEDD9Q14511 834 aa12.87□□□□□ -0.35
NPLOC4-206ENST00000571714 PUS10Q3MIT2 529 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-206ENST00000571714 RUFY4Q6ZNE9 571 aa12.87□□□□□ -0.35
NPLOC4-206ENST00000571714 APBB2Q92870 758 aa12.87□□□□□ -0.35
NPLOC4-206ENST00000571714 NSUN3Q9H649 340 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-206ENST00000571714 EHMT1Q9H9B1 1298 aa12.87□□□□□ -0.35
NPLOC4-206ENST00000571714 POTEB3A0JP26 581 aa12.86□□□□□ -0.35
NPLOC4-206ENST00000571714 C19orf67A6NJJ6 358 aa12.86□□□□□ -0.35
NPLOC4-206ENST00000571714 IFIT3O14879 490 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-206ENST00000571714 GHRP10912 638 aa12.86□□□□□ -0.35
NPLOC4-206ENST00000571714 ANTXR2P58335 489 aa12.86□□□□□ -0.35
NPLOC4-206ENST00000571714 SP4Q02446 784 aa12.86□□□□□ -0.35
NPLOC4-206ENST00000571714 PTH1RQ03431 593 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms