RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 NDUFA8P51970 172 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 JAK3P52333 1124 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 PRMT2P55345 433 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 SNW1Q13573 536 aaKnown RBP13.41□□□□□ -0.26
CDRT1-206ENST00000571263 EPHA7Q15375 998 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 CCDC183Q5T5S1 534 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 RRAGBQ5VZM2 374 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 OLFML2BQ68BL8 750 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 ZNF746Q6NUN9 644 aaPredicted RBP13.41□□□□□ -0.26
CDRT1-206ENST00000571263 ARMCX2Q7L311 632 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 SMAP1Q8IYB5 467 aaPredicted RBP13.41□□□□□ -0.26
CDRT1-206ENST00000571263 CEP57L1Q8IYX8 460 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 SCFD2Q8WU76 684 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 ERO1AQ96HE7 468 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 FGD4Q96M96 766 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 TINF2Q9BSI4 451 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 DACT1Q9NYF0 836 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 NRBP1Q9UHY1 535 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 THSD7BQ9C0I4 1608 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 PLXNB2O15031 1838 aa13.41□□□□□ -0.26
CDRT1-206ENST00000571263 POLR2DO15514 142 aaKnown RBP13.4□□□□□ -0.26
CDRT1-206ENST00000571263 NR1I2O75469 434 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 TBC1D8O95759 1140 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 MYL1P05976 194 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 LIG1P18858 919 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 RPA1P27694 616 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 AMPD3Q01432 767 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 GRIN1Q05586 938 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 TTLL4Q14679 1199 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 HYIQ5T013 277 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 B3GNT9Q6UX72 402 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 CNNM3Q8NE01 707 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 SNX29Q8TEQ0 813 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 EPSTI1Q96J88 318 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 APBA2Q99767 749 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 POLR3CQ9BUI4 534 aaPredicted RBP13.4□□□□□ -0.26
CDRT1-206ENST00000571263 NUP62CLQ9H1M0 184 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 R3HDMLQ9H3Y0 253 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 TUFT1Q9NNX1 390 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 STK17AQ9UEE5 414 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 GJD2Q9UKL4 321 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 VAV3Q9UKW4 847 aa13.4□□□□□ -0.26
CDRT1-206ENST00000571263 ASTN1O14525 1302 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 RBM47A0AV96 593 aaKnown RBP13.39□□□□□ -0.27
CDRT1-206ENST00000571263 WDR64B1ANS9 1081 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 GPR25O00155 361 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 NKRFO15226 690 aaKnown RBP eCLIP13.39□□□□□ -0.27
CDRT1-206ENST00000571263 DHX15O43143 795 aaKnown RBP13.39□□□□□ -0.27
CDRT1-206ENST00000571263 RGS20O76081 388 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 SLFN14P0C7P3 912 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 CCT6AP40227 531 aaKnown RBP13.39□□□□□ -0.27
CDRT1-206ENST00000571263 STAT6P42226 847 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 SPIRE1Q08AE8 756 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 SEMA3FQ13275 785 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 TPRNQ4KMQ1 711 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 SPECC1Q5M775 1068 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 IQSEC1Q6DN90 963 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 NCAPH2Q6IBW4 605 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 CAVIN1Q6NZI2 390 aaKnown RBP13.39□□□□□ -0.27
CDRT1-206ENST00000571263 KRBA2Q6ZNG9 492 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 SEPT14Q6ZU15 432 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 TNMDQ9H2S6 317 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 GOLPH3LQ9H4A5 285 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 CLSTN2Q9H4D0 955 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 DISC1Q9NRI5 854 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.39□□□□□ -0.27
CDRT1-206ENST00000571263 PCDHA10Q9Y5I2 948 aa13.39□□□□□ -0.27
CDRT1-206ENST00000571263 ZNFX1Q9P2E3 1918 aaKnown RBP13.39□□□□□ -0.27
CDRT1-206ENST00000571263 POTEMA6NI47 508 aa13.38□□□□□ -0.27
CDRT1-206ENST00000571263 FKTNO75072 461 aa13.38□□□□□ -0.27
CDRT1-206ENST00000571263 P4HBP07237 508 aaKnown RBP13.38□□□□□ -0.27
CDRT1-206ENST00000571263 XRCC6P12956 609 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDRT1-206ENST00000571263 KCNA2P16389 499 aa13.38□□□□□ -0.27
CDRT1-206ENST00000571263 MIER3Q7Z3K6 550 aa13.38□□□□□ -0.27
CDRT1-206ENST00000571263 NPLOC4Q8TAT6 608 aa13.38□□□□□ -0.27
CDRT1-206ENST00000571263 ZFP91Q96JP5 570 aaPredicted RBP13.38□□□□□ -0.27
CDRT1-206ENST00000571263 JPH1Q9HDC5 661 aaPredicted RBP13.38□□□□□ -0.27
CDRT1-206ENST00000571263 SLC9A2Q9UBY0 812 aa13.38□□□□□ -0.27
CDRT1-206ENST00000571263 DDX41Q9UJV9 622 aaKnown RBP13.38□□□□□ -0.27
CDRT1-206ENST00000571263 ATP9AO75110 1047 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 PSAPP07602 524 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 TXNP10599 105 aaKnown RBP13.37□□□□□ -0.27
CDRT1-206ENST00000571263 CYP2B6P20813 491 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 ITGB3BPQ13352 177 aaPredicted RBP13.37□□□□□ -0.27
CDRT1-206ENST00000571263 ACVR2BQ13705 512 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 LAMC2Q13753 1193 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 LONRF3Q496Y0 759 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 MFSD14CQ5VZR4 134 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 METTL7BQ6UX53 244 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 USP49Q70CQ1 688 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 PDILTQ8N807 584 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 TRIM47Q96LD4 638 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 NACC1Q96RE7 527 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 HSD17B14Q9BPX1 270 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 EIF2AK1Q9BQI3 630 aaKnown RBP13.37□□□□□ -0.27
CDRT1-206ENST00000571263 MMTAG2Q9BU76 263 aaKnown RBP13.37□□□□□ -0.27
CDRT1-206ENST00000571263 UNC45AQ9H3U1 944 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 MLXIPQ9HAP2 919 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 DNM3Q9UQ16 869 aa13.37□□□□□ -0.27
CDRT1-206ENST00000571263 SAMM50Q9Y512 469 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms