RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 THAP3Q8WTV1 239 aaPredicted RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 RSAD2Q8WXG1 361 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 USP6NLQ92738 828 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 SNX21Q969T3 373 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 EMID1Q96A84 441 aaPredicted RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 XAGE2Q96GT9 111 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 HIC2Q96JB3 615 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 TNIP3Q96KP6 325 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 NLRP3Q96P20 1036 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 NEK1Q96PY6 1258 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 MAP7D2Q96T17 732 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 SETDB2Q96T68 719 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 EIF2AK1Q9BQI3 630 aaKnown RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 NUDT16L1Q9BRJ7 211 aaKnown RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 FSD1Q9BTV5 496 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 MKNK1Q9BUB5 465 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 UTP14AQ9BVJ6 771 aaKnown RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 TSPYL1Q9H0U9 437 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 CDHR5Q9HBB8 845 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 ATP6V0A4Q9HBG4 840 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 NLRC4Q9NPP4 1024 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 NPDC1Q9NQX5 325 aaPredicted RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 TBC1D22BQ9NU19 505 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 BLOC1S4Q9NUP1 217 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 MRGBPQ9NV56 204 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 DNAAF2Q9NVR5 837 aaKnown RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 ARGLU1Q9NWB6 273 aaPredicted RBP3.99□□□□□ -1.77
SMG6-208ENST00000570874 IRAK4Q9NWZ3 460 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 MKS1Q9NXB0 559 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 NKIRAS2Q9NYR9 191 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 PRKAG3Q9UGI9 489 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 NARFQ9UHQ1 456 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 CFAP45Q9UL16 551 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 TMX2Q9Y320 296 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 PAXBP1Q9Y5B6 917 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 TAF6LQ9Y6J9 622 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 SIPA1L1O43166 1804 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 ARFGEF1Q9Y6D6 1849 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 CARMIL3Q8ND23 1372 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 MED23Q9ULK4 1368 aa3.99□□□□□ -1.77
SMG6-208ENST00000570874 TIAM2Q8IVF5 1701 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 SH3TC1Q8TE82 1336 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 RAD50Q92878 1312 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 ATAD5Q96QE3 1844 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 ABHD14A-ACY1A0A1B0GW23 586 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 ANKRD18BA2A2Z9 1011 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 FAM181BA6NEQ2 426 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 C2orf81A6NN90 581 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 F5H423 210 aaPredicted RBP3.98□□□□□ -1.77
SMG6-208ENST00000570874 M0R2C6 588 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 ZBTB39O15060 712 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 MUSKO15146 869 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 DDX3YO15523 660 aaKnown RBP3.98□□□□□ -1.77
SMG6-208ENST00000570874 CIAO1O76071 339 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 MBD4O95243 580 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 IFIT1P09914 478 aaKnown RBP3.98□□□□□ -1.77
SMG6-208ENST00000570874 KRT10P13645 584 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 KRT13P13646 458 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 CD46P15529 392 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 ATP5JP18859 108 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 VCAM1P19320 739 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 CAPN3P20807 821 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 SMARCA1P28370 1054 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 HOXD12P35452 270 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 IL15P40933 162 aaPredicted RBP3.98□□□□□ -1.77
SMG6-208ENST00000570874 MCAMP43121 646 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 MAPK9P45984 424 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 PHKA1P46020 1223 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 LMNB2Q03252 620 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 ITKQ08881 620 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 LRRC74AQ0VAA2 488 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 PKN2Q16513 984 aaKnown RBP3.98□□□□□ -1.77
SMG6-208ENST00000570874 ATP2B3Q16720 1220 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 ZNF827Q17R98 1081 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 EML3Q32P44 896 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 ADCK5Q3MIX3 580 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 SPATA1Q5VX52 437 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 POTEAQ6S8J7 498 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 LDHAL6AQ6ZMR3 332 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 NIM1KQ8IY84 436 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 CEP57L1Q8IYX8 460 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 MICALL1Q8N3F8 863 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 SPATA5Q8NB90 893 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 UHMK1Q8TAS1 419 aaKnown RBP3.98□□□□□ -1.77
SMG6-208ENST00000570874 CELF1Q92879 486 aaKnown RBP3.98□□□□□ -1.77
SMG6-208ENST00000570874 TRIM63Q969Q1 353 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 JAKMIP2Q96AA8 810 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 TIFAQ96CG3 184 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 MOGAT1Q96PD6 335 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 PURBQ96QR8 312 aaKnown RBP3.98□□□□□ -1.77
SMG6-208ENST00000570874 HAUS7Q99871 368 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 RHOBTB2Q9BYZ6 727 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 IQCGQ9H095 443 aaKnown RBP3.98□□□□□ -1.77
SMG6-208ENST00000570874 EFCC1Q9HA90 598 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 FBRSQ9HAH7 460 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 CNNM1Q9NRU3 951 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 ATP8A2Q9NTI2 1148 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 EXOC1Q9NV70 894 aa3.98□□□□□ -1.77
SMG6-208ENST00000570874 PIH1D1Q9NWS0 290 aaKnown RBP3.98□□□□□ -1.77
SMG6-208ENST00000570874 KCTD5Q9NXV2 234 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms