RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 SCG2P13521 617 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 DNAJB2P25686 324 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 PSMA5P28066 241 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 PDIA3P30101 505 aaKnown RBP6.2□□□□□ -1.42
CHD3-212ENST00000570758 CLK2P49760 499 aaKnown RBP6.2□□□□□ -1.42
CHD3-212ENST00000570758 RABGGTBP53611 331 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 EVCP57679 992 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 CCT2P78371 535 aaKnown RBP6.2□□□□□ -1.42
CHD3-212ENST00000570758 SP4Q02446 784 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 RBL2Q08999 1139 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 NEDD9Q14511 834 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 NTRK3Q16288 839 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 PFKFB3Q16875 520 aaPredicted RBP6.2□□□□□ -1.42
CHD3-212ENST00000570758 TCTN1Q2MV58 587 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 UTP14CQ5TAP6 766 aaKnown RBP6.2□□□□□ -1.42
CHD3-212ENST00000570758 ZNF697Q5TEC3 545 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 TRAF7Q6Q0C0 670 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 RUFY3Q7L099 469 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 RPUSD2Q8IZ73 545 aaKnown RBP6.2□□□□□ -1.42
CHD3-212ENST00000570758 C7orf31Q8N865 590 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 RETREG2Q8NC44 543 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 CYP2W1Q8TAV3 490 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 PHKBQ93100 1093 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 TIFAQ96CG3 184 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 GPRASP2Q96D09 838 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 CDX2Q99626 313 aaPredicted RBP6.2□□□□□ -1.42
CHD3-212ENST00000570758 SENP7Q9BQF6 1050 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 KATNAL1Q9BW62 490 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 ANO3Q9BYT9 981 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 UPF3BQ9BZI7 483 aaKnown RBP6.2□□□□□ -1.42
CHD3-212ENST00000570758 TM6SF1Q9BZW5 370 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 NCOA5Q9HCD5 579 aaKnown RBP6.2□□□□□ -1.42
CHD3-212ENST00000570758 JADE2Q9NQC1 790 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 PKD2L1Q9P0L9 805 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 NOD1Q9Y239 953 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 STXBP5LQ9Y2K9 1186 aa6.2□□□□□ -1.42
CHD3-212ENST00000570758 CCDC196A0A1B0GTZ2 297 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 GSTTP1A0A1W2PQM5 241 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 ZBBXA8MT70 800 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 H3BRB1 525 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 hCG_1984214I3L0E3 225 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 NOP56O00567 594 aaKnown RBP6.19□□□□□ -1.42
CHD3-212ENST00000570758 NBNO60934 754 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 CENPBP07199 599 aaPredicted RBP6.19□□□□□ -1.42
CHD3-212ENST00000570758 PFKMP08237 780 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 ARP10275 920 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 CKBP12277 381 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 SELPP16109 830 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 IFNAR1P17181 557 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 HOXC8P31273 242 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 RFC2P35250 354 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 SREBF1P36956 1147 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 PTK7Q13308 1070 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 BFSP2Q13515 415 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 MTMR1Q13613 665 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 JAKMIP3Q5VZ66 844 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 LRRC8DQ7L1W4 858 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 ZNF713Q8N859 430 aaPredicted RBP6.19□□□□□ -1.42
CHD3-212ENST00000570758 CAGE1Q8TC20 777 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 AFAP1L1Q8TED9 768 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 MYLIPQ8WY64 445 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 MXRA8Q9BRK3 442 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 SLC26A6Q9BXS9 759 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 PBX4Q9BYU1 374 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 FTOQ9C0B1 505 aaKnown RBP eCLIP6.19□□□□□ -1.42
CHD3-212ENST00000570758 NKX2-4Q9H2Z4 354 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 TUT1Q9H6E5 874 aaKnown RBP6.19□□□□□ -1.42
CHD3-212ENST00000570758 EHMT1Q9H9B1 1298 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 YBX2Q9Y2T7 364 aaKnown RBP6.19□□□□□ -1.42
CHD3-212ENST00000570758 CYP46A1Q9Y6A2 500 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 TANC1Q9C0D5 1861 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 SZT2Q5T011 3432 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 LAMA3Q16787 3333 aa6.19□□□□□ -1.42
CHD3-212ENST00000570758 TMEM265A0A087WTH1 108 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 ESYT2A0FGR8 921 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 C17orf102A2RUQ5 167 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 TREHO43280 583 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 EDIL3O43854 480 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 DTNBO60941 627 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 FOSP01100 380 aaPredicted RBP6.18□□□□□ -1.42
CHD3-212ENST00000570758 CXCL10P02778 98 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 MYOGP15173 224 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 ATP2A2P16615 1042 aaKnown RBP6.18□□□□□ -1.42
CHD3-212ENST00000570758 MARK3P27448 753 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 TCF7P36402 384 aaPredicted RBP6.18□□□□□ -1.42
CHD3-212ENST00000570758 ADAM17P78536 824 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 ARHGAP4P98171 946 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 ITGB3BPQ13352 177 aaPredicted RBP6.18□□□□□ -1.42
CHD3-212ENST00000570758 AP3B2Q13367 1082 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 MBTPS1Q14703 1052 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 GRIN2CQ14957 1233 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 ZNF618Q5T7W0 954 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 SERINC5Q86VE9 423 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 TEX2Q8IWB9 1127 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 CCDC155Q8N6L0 562 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 GIMAP8Q8ND71 665 aaPredicted RBP6.18□□□□□ -1.42
CHD3-212ENST00000570758 TET1Q8NFU7 2136 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 RASGRP4Q8TDF6 673 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 CRYGNQ8WXF5 182 aa6.18□□□□□ -1.42
CHD3-212ENST00000570758 SEPT1Q8WYJ6 367 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms