RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 SLC43A3Q8NBI5 491 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 HERVK_113Q902F9 699 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 RNF166Q96A37 237 aaPredicted RBP7.62□□□□□ -1.19
SMG6-204ENST00000570606 PURBQ96QR8 312 aaKnown RBP7.62□□□□□ -1.19
SMG6-204ENST00000570606 CRBNQ96SW2 442 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 TMEM47Q9BQJ4 181 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 WDR11Q9BZH6 1224 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 TRPV6Q9H1D0 765 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 ALDH8A1Q9H2A2 487 aaPredicted RBP7.62□□□□□ -1.19
SMG6-204ENST00000570606 NKX2-4Q9H2Z4 354 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 CHD7Q9P2D1 2997 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 PNMA2Q9UL42 364 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 Q9Y3F1 56 aa7.62□□□□□ -1.19
SMG6-204ENST00000570606 TET1Q8NFU7 2136 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 BRWD1Q9NSI6 2320 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 GRIN2DO15399 1336 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 TNKSO95271 1327 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 WDR19Q8NEZ3 1342 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 LOC102724159A0A0B4J2E5 919 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 FGAP02671 866 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 HSPD1P10809 573 aaKnown RBP7.61□□□□□ -1.19
SMG6-204ENST00000570606 PDHBP11177 359 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 IGFBP4P22692 258 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 MFAP1P55081 439 aaKnown RBP7.61□□□□□ -1.19
SMG6-204ENST00000570606 NMIQ13287 307 aaPredicted RBP7.61□□□□□ -1.19
SMG6-204ENST00000570606 AGERQ15109 404 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 PWP2Q15269 919 aaKnown RBP7.61□□□□□ -1.19
SMG6-204ENST00000570606 MAP7D1Q3KQU3 841 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 TSGA10IPQ3SY00 556 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 USH1GQ495M9 461 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 TMEM63BQ5T3F8 832 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 BTNL9Q6UXG8 535 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 RNF207Q6ZRF8 634 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 ZNF589Q86UQ0 364 aaPredicted RBP7.61□□□□□ -1.19
SMG6-204ENST00000570606 RPUSD2Q8IZ73 545 aaKnown RBP7.61□□□□□ -1.19
SMG6-204ENST00000570606 MICALL1Q8N3F8 863 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 MORC4Q8TE76 937 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 RILPL2Q969X0 211 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 SCLYQ96I15 445 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 LNPKQ9C0E8 428 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 WNT8AQ9H1J5 351 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 RNF41Q9H4P4 317 aaPredicted RBP7.61□□□□□ -1.19
SMG6-204ENST00000570606 SLC28A3Q9HAS3 691 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 PRDM6Q9NQX0 595 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 TRMT13Q9NUP7 481 aaKnown RBP7.61□□□□□ -1.19
SMG6-204ENST00000570606 CXXC1Q9P0U4 656 aaPredicted RBP7.61□□□□□ -1.19
SMG6-204ENST00000570606 THEGQ9P2T0 379 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 SLC4A7Q9Y6M7 1214 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 BDP1A6H8Y1 2624 aa7.61□□□□□ -1.19
SMG6-204ENST00000570606 TCF20Q9UGU0 1960 aaKnown RBP7.6□□□□□ -1.19
SMG6-204ENST00000570606 MYH7BA7E2Y1 1941 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 NEDD4P46934 1319 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 B4DLN1 442 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 NKRFO15226 690 aaKnown RBP eCLIP7.6□□□□□ -1.19
SMG6-204ENST00000570606 BRD1O95696 1058 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 PFKMP08237 780 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 FGRP09769 529 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 SUPT20HL2P0C7V6 817 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 PCP11498 1178 aaKnown RBP7.6□□□□□ -1.19
SMG6-204ENST00000570606 CYP2C9P11712 490 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 ATP2A2P16615 1042 aaKnown RBP7.6□□□□□ -1.19
SMG6-204ENST00000570606 NOVP48745 357 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 MRPL12P52815 198 aaKnown RBP7.6□□□□□ -1.19
SMG6-204ENST00000570606 RABGGTBP53611 331 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 CHMP4BP1P59074 171 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 RPS6P62753 249 aaKnown RBP7.6□□□□□ -1.19
SMG6-204ENST00000570606 PURAQ00577 322 aaKnown RBP7.6□□□□□ -1.19
SMG6-204ENST00000570606 ZNF543Q08ER8 600 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 HDAC1Q13547 482 aaPredicted RBP7.6□□□□□ -1.19
SMG6-204ENST00000570606 CRTC2Q53ET0 693 aaPredicted RBP7.6□□□□□ -1.19
SMG6-204ENST00000570606 AKNAD1Q5T1N1 836 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 GPATCH4Q5T3I0 446 aaKnown RBP7.6□□□□□ -1.19
SMG6-204ENST00000570606 MFSD6Q6ZSS7 791 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 DEFB128Q7Z7B8 93 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 TBC1D10CQ8IV04 446 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 SPNS2Q8IVW8 549 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 SCFD2Q8WU76 684 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 ESR2Q92731 530 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 MTG1Q9BT17 334 aaPredicted RBP7.6□□□□□ -1.19
SMG6-204ENST00000570606 TCP11L1Q9NUJ3 509 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 NOD1Q9Y239 953 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 YBX2Q9Y2T7 364 aaKnown RBP7.6□□□□□ -1.19
SMG6-204ENST00000570606 COL4A4P53420 1690 aaPredicted RBP7.6□□□□□ -1.19
SMG6-204ENST00000570606 MUC3AQ02505 3323 aa7.6□□□□□ -1.19
SMG6-204ENST00000570606 TRANK1O15050 2925 aa7.59□□□□□ -1.19
SMG6-204ENST00000570606 BAZ2BQ9UIF8 2168 aaKnown RBP7.59□□□□□ -1.19
SMG6-204ENST00000570606 PTPRSQ13332 1948 aa7.59□□□□□ -1.19
SMG6-204ENST00000570606 DHX16O60231 1041 aaKnown RBP7.59□□□□□ -1.19
SMG6-204ENST00000570606 GOLGA8HP0CJ92 632 aa7.59□□□□□ -1.19
SMG6-204ENST00000570606 ACTN1P12814 892 aa7.59□□□□□ -1.19
SMG6-204ENST00000570606 PTK7Q13308 1070 aa7.59□□□□□ -1.19
SMG6-204ENST00000570606 ADGRE1Q14246 886 aa7.59□□□□□ -1.19
SMG6-204ENST00000570606 TTLL4Q14679 1199 aa7.59□□□□□ -1.19
SMG6-204ENST00000570606 CCDC85BQ15834 202 aaPredicted RBP7.59□□□□□ -1.19
SMG6-204ENST00000570606 CDC37Q16543 378 aaPredicted RBP7.59□□□□□ -1.19
SMG6-204ENST00000570606 IQCA1Q86XH1 822 aa7.59□□□□□ -1.19
SMG6-204ENST00000570606 CCDC155Q8N6L0 562 aa7.59□□□□□ -1.19
SMG6-204ENST00000570606 DNERQ8NFT8 737 aa7.59□□□□□ -1.19
SMG6-204ENST00000570606 STK32AQ8WU08 396 aa7.59□□□□□ -1.19
SMG6-204ENST00000570606 PPP1R13LQ8WUF5 828 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms