RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 ARHGEF1Q92888 912 aaKnown RBP16.84■□□□□ 0.29
USP43-202ENST00000570475 TMX4Q9H1E5 349 aaPredicted RBP16.84■□□□□ 0.29
USP43-202ENST00000570475 EMILIN3Q9NT22 766 aa16.84■□□□□ 0.29
USP43-202ENST00000570475 A0A087X0T9 212 aa16.84■□□□□ 0.29
USP43-202ENST00000570475 HGSO14964 777 aaPredicted RBP16.84■□□□□ 0.29
USP43-202ENST00000570475 GCNT3O95395 438 aa16.84■□□□□ 0.29
USP43-202ENST00000570475 FAM228BP0C875 321 aa16.84■□□□□ 0.29
USP43-202ENST00000570475 ERGIC2Q96RQ1 377 aa16.84■□□□□ 0.29
USP43-202ENST00000570475 MMTAG2Q9BU76 263 aaKnown RBP16.84■□□□□ 0.29
USP43-202ENST00000570475 DDX47Q9H0S4 455 aaKnown RBP16.84■□□□□ 0.29
USP43-202ENST00000570475 BLOC1S4Q9NUP1 217 aa16.84■□□□□ 0.29
USP43-202ENST00000570475 TNNC1P63316 161 aa16.84■□□□□ 0.29
USP43-202ENST00000570475 MEA1Q16626 185 aa16.84■□□□□ 0.29
USP43-202ENST00000570475 ARHGAP44Q17R89 818 aa16.84■□□□□ 0.29
USP43-202ENST00000570475 PDXDC1Q6P996 788 aa16.84■□□□□ 0.29
USP43-202ENST00000570475 PACS2Q86VP3 889 aa16.84■□□□□ 0.29
USP43-202ENST00000570475 CUL5Q93034 780 aa16.84■□□□□ 0.29
USP43-202ENST00000570475 PCDHA1Q9Y5I3 950 aa16.84■□□□□ 0.29
USP43-202ENST00000570475 TBCAO75347 108 aaKnown RBP16.83■□□□□ 0.29
USP43-202ENST00000570475 PLA2G4BP0C869 781 aa16.83■□□□□ 0.29
USP43-202ENST00000570475 PPP1R2P41236 205 aa16.83■□□□□ 0.29
USP43-202ENST00000570475 MKRN4PQ13434 485 aaPredicted RBP16.83■□□□□ 0.29
USP43-202ENST00000570475 PEX26Q7Z412 305 aa16.83■□□□□ 0.29
USP43-202ENST00000570475 FGFBP2Q9BYJ0 223 aa16.83■□□□□ 0.29
USP43-202ENST00000570475 CD209Q9NNX6 404 aa16.83■□□□□ 0.29
USP43-202ENST00000570475 USP40Q9NVE5 1235 aa16.83■□□□□ 0.29
USP43-202ENST00000570475 MYH10P35580 1976 aa16.83■□□□□ 0.29
USP43-202ENST00000570475 TRPM3Q9HCF6 1732 aaPredicted RBP16.83■□□□□ 0.29
USP43-202ENST00000570475 TARSL2A2RTX5 802 aaKnown RBP16.83■□□□□ 0.28
USP43-202ENST00000570475 KRT13P13646 458 aa16.83■□□□□ 0.28
USP43-202ENST00000570475 SLC9A1P19634 815 aa16.83■□□□□ 0.28
USP43-202ENST00000570475 CTNNA1P35221 906 aaKnown RBP16.83■□□□□ 0.28
USP43-202ENST00000570475 IFT88Q13099 833 aa16.83■□□□□ 0.28
USP43-202ENST00000570475 DAAM2Q86T65 1068 aa16.83■□□□□ 0.28
USP43-202ENST00000570475 SPICE1Q8N0Z3 855 aa16.83■□□□□ 0.28
USP43-202ENST00000570475 PNMA5Q96PV4 448 aa16.83■□□□□ 0.28
USP43-202ENST00000570475 LRRC27Q9C0I9 530 aa16.83■□□□□ 0.28
USP43-202ENST00000570475 C4AP0C0L4 1744 aa16.83■□□□□ 0.28
USP43-202ENST00000570475 C4BP0C0L5 1744 aa16.83■□□□□ 0.28
USP43-202ENST00000570475 GOLGA6L7A0A1B0GV03 622 aa16.83■□□□□ 0.28
USP43-202ENST00000570475 GOLGA8KD6RF30 607 aa16.83■□□□□ 0.28
USP43-202ENST00000570475 VPS36Q86VN1 386 aa16.83■□□□□ 0.28
USP43-202ENST00000570475 ARMCX3Q9UH62 379 aaPredicted RBP16.83■□□□□ 0.28
USP43-202ENST00000570475 GOLGB1Q14789 3259 aaKnown RBP16.83■□□□□ 0.28
USP43-202ENST00000570475 TJP1Q07157 1748 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 KRIT1O00522 736 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 PRPHP41219 470 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 GPSM2P81274 684 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 HAUS3Q68CZ6 603 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 CENPPQ6IPU0 288 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 FAM196AQ6ZSG2 479 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 GUF1Q8N442 669 aaKnown RBP16.82■□□□□ 0.28
USP43-202ENST00000570475 TLR10Q9BXR5 811 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 PLEKHG2Q9H7P9 1386 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 KCNH2Q12809 1159 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 VIPAS39Q9H9C1 493 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 AGPSO00116 658 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 HOXA13P31271 388 aaPredicted RBP16.82■□□□□ 0.28
USP43-202ENST00000570475 GJB7Q6PEY0 223 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 TADA2BQ86TJ2 420 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 ADGRF4Q8IZF3 695 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 NEDD1Q8NHV4 660 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 MAGEF1Q9HAY2 307 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 STK17AQ9UEE5 414 aa16.82■□□□□ 0.28
USP43-202ENST00000570475 GFPT2O94808 682 aa16.81■□□□□ 0.28
USP43-202ENST00000570475 PLAAQ9Y263 795 aa16.81■□□□□ 0.28
USP43-202ENST00000570475 FLT1P17948 1338 aa16.81■□□□□ 0.28
USP43-202ENST00000570475 NID2Q14112 1375 aa16.81■□□□□ 0.28
USP43-202ENST00000570475 SERPING1P05155 500 aa16.81■□□□□ 0.28
USP43-202ENST00000570475 PDHBP11177 359 aa16.81■□□□□ 0.28
USP43-202ENST00000570475 PLCG2P16885 1265 aa16.81■□□□□ 0.28
USP43-202ENST00000570475 LRRC63Q05C16 580 aa16.81■□□□□ 0.28
USP43-202ENST00000570475 ZYXQ15942 572 aaKnown RBP16.81■□□□□ 0.28
USP43-202ENST00000570475 KSR1Q8IVT5 923 aa16.81■□□□□ 0.28
USP43-202ENST00000570475 NARFQ9UHQ1 456 aa16.81■□□□□ 0.28
USP43-202ENST00000570475 ZBTB21Q9ULJ3 1066 aa16.81■□□□□ 0.28
USP43-202ENST00000570475 COPB2P35606 906 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 CYP2J2P51589 502 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 CCDC25Q86WR0 208 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 PIGOQ8TEQ8 1089 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 SELENOSQ9BQE4 189 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 ZC3H12CQ9C0D7 883 aaKnown RBP16.8■□□□□ 0.28
USP43-202ENST00000570475 HDAC9Q9UKV0 1011 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 SPDYE3A6NKU9 549 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 DDX39AO00148 427 aaKnown RBP16.8■□□□□ 0.28
USP43-202ENST00000570475 XRCC5P13010 732 aaKnown RBP16.8■□□□□ 0.28
USP43-202ENST00000570475 NR1D1P20393 614 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 ECM1Q16610 540 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 EXOC3L4Q17RC7 722 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 KRT71Q3SY84 523 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 KLHDC7AQ5VTJ3 777 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 TPH2Q8IWU9 490 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 SLF2Q8IX21 1173 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 SPZ1Q9BXG8 430 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 SIK3Q9Y2K2 1263 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 PHRF1Q9P1Y6 1649 aaKnown RBP16.8■□□□□ 0.28
USP43-202ENST00000570475 USP54Q70EL1 1684 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 FGRP09769 529 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 CDR1P51861 262 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 ALKBH5Q6P6C2 394 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms