RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 ARHGEF35A5YM69 484 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 PPATQ06203 517 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 TMEM119Q4V9L6 283 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 ERO1BQ86YB8 467 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 CPXCR1Q8N123 301 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 CEP63Q96MT8 703 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 METTL14Q9HCE5 456 aaKnown RBP6.7□□□□□ -1.34
CYLD-216ENST00000569891 FANCLQ9NW38 375 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 PCDHAC2Q9Y5I4 1007 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 LRRC37A2A6NM11 1700 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 MEIS2O14770 477 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 ARHGAP6O43182 974 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 EYA4O95677 639 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 PLA2G4BP0C869 781 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 SKILP12757 684 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 VCAM1P19320 739 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 NAALADL2Q58DX5 795 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 PCNX4Q63HM2 1172 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 ATP6V0A1Q93050 837 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 GPRASP2Q96D09 838 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 TRERF1Q96PN7 1200 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 MXRA8Q9BRK3 442 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 FHDC1Q9C0D6 1143 aaPredicted RBP6.7□□□□□ -1.34
CYLD-216ENST00000569891 ZHX3Q9H4I2 956 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 FAM184BQ9ULE4 1060 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 EXOC7Q9UPT5 735 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 KIAA1024Q9UPX6 916 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 PAXBP1Q9Y5B6 917 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 PCDHB13Q9Y5F0 798 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 ITIH6Q6UXX5 1313 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 AKR1B15C9JRZ8 316 aaPredicted RBP6.7□□□□□ -1.34
CYLD-216ENST00000569891 CETN3O15182 167 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 PTPRAP18433 802 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 DSG3P32926 999 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 FKBP1BP68106 108 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 CETN1Q12798 172 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 NOLC1Q14978 699 aaKnown RBP eCLIP6.7□□□□□ -1.34
CYLD-216ENST00000569891 CCDC40Q4G0X9 1142 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 NSMFQ6X4W1 530 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 VSTM4Q8IW00 320 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 ADSSL1Q8N142 457 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 BLZF1Q9H2G9 400 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 ZSWIM4Q9H7M6 989 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 RNF146Q9NTX7 359 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 ODF2LQ9ULJ1 636 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 SAMM50Q9Y512 469 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 A0A1W2PRG0 241 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 KCNJ18B7U540 433 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 ATP2A1O14983 1001 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 HSD17B4P51659 736 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 SNRPFP62306 86 aaKnown RBP6.69□□□□□ -1.34
CYLD-216ENST00000569891 GHRHRQ02643 423 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 GRIN1Q05586 938 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 CUL4BQ13620 913 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 KCNJ12Q14500 433 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 NBPF12Q5TAG4 269 aaPredicted RBP6.69□□□□□ -1.34
CYLD-216ENST00000569891 VTI1AQ96AJ9 217 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 KLRG1Q96E93 195 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 LARSQ9P2J5 1176 aaKnown RBP6.69□□□□□ -1.34
CYLD-216ENST00000569891 PHF20L1A8MW92 1017 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 P4HBP07237 508 aaKnown RBP6.69□□□□□ -1.34
CYLD-216ENST00000569891 PRR29P0C7W0 189 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 FKBP3Q00688 224 aaKnown RBP6.69□□□□□ -1.34
CYLD-216ENST00000569891 PPP2R5CQ13362 524 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 SLC35G1Q2M3R5 365 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 HERC4Q5GLZ8 1057 aaPredicted RBP6.69□□□□□ -1.34
CYLD-216ENST00000569891 SH3D19Q5HYK7 790 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 C9orf131Q5VYM1 1079 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 SIAH1Q8IUQ4 282 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 TEPSINQ96N21 525 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 LIMA1Q9UHB6 759 aaKnown RBP6.69□□□□□ -1.34
CYLD-216ENST00000569891 PPME1Q9Y570 386 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 ZNF541Q9H0D2 1346 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 A0A1W2PQC6 194 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 STX10O60499 249 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 CCDC172P0C7W6 258 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 PTGS1P23219 599 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 SMTNP53814 917 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 LRRC8AQ8IWT6 810 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 SMAP1Q8IYB5 467 aaPredicted RBP6.69□□□□□ -1.34
CYLD-216ENST00000569891 EHBP1Q8NDI1 1231 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 DNERQ8NFT8 737 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 SLC5A4Q9NY91 659 aa6.69□□□□□ -1.34
CYLD-216ENST00000569891 WDR64B1ANS9 1081 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 IPO5O00410 1097 aaKnown RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 SLC37A4O43826 429 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 OFD1O75665 1012 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 STAT3P40763 770 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 PTPN14Q15678 1187 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 USP49Q70CQ1 688 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 TMTC1Q8IUR5 882 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 SLC5A5Q92911 643 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 L3MBTL3Q96JM7 780 aaPredicted RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 DRC1Q96MC2 740 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 NAP1L5Q96NT1 182 aaPredicted RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 CLEC11AQ9Y240 323 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 BAZ2BQ9UIF8 2168 aaKnown RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 CUBNO60494 3623 aa6.68□□□□□ -1.34
CYLD-216ENST00000569891 PPP1R11O60927 126 aaPredicted RBP6.68□□□□□ -1.34
CYLD-216ENST00000569891 TUBB4BP68371 445 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms