RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 ZNF746Q6NUN9 644 aaPredicted RBP26.49■■□□□ 1.83
RAB40C-212ENST00000569575 DTHD1Q6ZMT9 781 aa26.49■■□□□ 1.83
RAB40C-212ENST00000569575 LINC00301Q8NCQ3 95 aa26.49■■□□□ 1.83
RAB40C-212ENST00000569575 HAS1Q92839 578 aa26.49■■□□□ 1.83
RAB40C-212ENST00000569575 SPC25Q9HBM1 224 aa26.49■■□□□ 1.83
RAB40C-212ENST00000569575 GNEQ9Y223 722 aaKnown RBP26.49■■□□□ 1.83
RAB40C-212ENST00000569575 WNT7AO00755 349 aa26.48■■□□□ 1.83
RAB40C-212ENST00000569575 DHX15O43143 795 aaKnown RBP26.48■■□□□ 1.83
RAB40C-212ENST00000569575 RARBP10826 455 aa26.48■■□□□ 1.83
RAB40C-212ENST00000569575 SMPD1P17405 629 aa26.48■■□□□ 1.83
RAB40C-212ENST00000569575 UBA1P22314 1058 aaKnown RBP26.48■■□□□ 1.83
RAB40C-212ENST00000569575 SFNP31947 248 aa26.48■■□□□ 1.83
RAB40C-212ENST00000569575 FXR2P51116 673 aaKnown RBP eCLIP26.48■■□□□ 1.83
RAB40C-212ENST00000569575 PPP2R5CQ13362 524 aa26.48■■□□□ 1.83
RAB40C-212ENST00000569575 STK38Q15208 465 aa26.48■■□□□ 1.83
RAB40C-212ENST00000569575 DHX37Q8IY37 1157 aaKnown RBP26.48■■□□□ 1.83
RAB40C-212ENST00000569575 SMAP1Q8IYB5 467 aaPredicted RBP26.48■■□□□ 1.83
RAB40C-212ENST00000569575 TRPV1Q8NER1 839 aa26.48■■□□□ 1.83
RAB40C-212ENST00000569575 ZFP91Q96JP5 570 aaPredicted RBP26.48■■□□□ 1.83
RAB40C-212ENST00000569575 MLXIPQ9HAP2 919 aa26.48■■□□□ 1.83
RAB40C-212ENST00000569575 JPH1Q9HDC5 661 aaPredicted RBP26.48■■□□□ 1.83
RAB40C-212ENST00000569575 CLIC4Q9Y696 253 aa26.48■■□□□ 1.83
RAB40C-212ENST00000569575 DDX49Q9Y6V7 483 aaKnown RBP26.48■■□□□ 1.83
RAB40C-212ENST00000569575 CNGA1P29973 690 aa26.47■■□□□ 1.83
RAB40C-212ENST00000569575 AK8Q96MA6 479 aa26.47■■□□□ 1.83
RAB40C-212ENST00000569575 AP5M1Q9H0R1 490 aa26.47■■□□□ 1.83
RAB40C-212ENST00000569575 TTC12Q9H892 705 aaPredicted RBP26.47■■□□□ 1.83
RAB40C-212ENST00000569575 SLC9A2Q9UBY0 812 aa26.47■■□□□ 1.83
RAB40C-212ENST00000569575 DDX20Q9UHI6 824 aaKnown RBP26.47■■□□□ 1.83
RAB40C-212ENST00000569575 SPTLC2O15270 562 aa26.46■■□□□ 1.83
RAB40C-212ENST00000569575 ATP9AO75110 1047 aa26.46■■□□□ 1.83
RAB40C-212ENST00000569575 FARP2O94887 1054 aaPredicted RBP26.46■■□□□ 1.83
RAB40C-212ENST00000569575 GGPS1O95749 300 aa26.46■■□□□ 1.83
RAB40C-212ENST00000569575 JAK3P52333 1124 aa26.46■■□□□ 1.83
RAB40C-212ENST00000569575 SP2Q02086 613 aa26.46■■□□□ 1.83
RAB40C-212ENST00000569575 TRIM32Q13049 653 aa26.46■■□□□ 1.83
RAB40C-212ENST00000569575 NBR1Q14596 966 aa26.46■■□□□ 1.83
RAB40C-212ENST00000569575 LY6KQ17RY6 165 aa26.46■■□□□ 1.83
RAB40C-212ENST00000569575 SH3TC2Q8TF17 1288 aa26.46■■□□□ 1.83
RAB40C-212ENST00000569575 TNPO1Q92973 898 aaKnown RBP26.46■■□□□ 1.83
RAB40C-212ENST00000569575 TMEM60Q9H2L4 133 aa26.46■■□□□ 1.83
RAB40C-212ENST00000569575 TFIP11Q9UBB9 837 aaKnown RBP26.46■■□□□ 1.83
RAB40C-212ENST00000569575 SRPRBQ9Y5M8 271 aaKnown RBP26.46■■□□□ 1.83
RAB40C-212ENST00000569575 SLC26A4O43511 780 aa26.45■■□□□ 1.82
RAB40C-212ENST00000569575 KPNA6O60684 536 aa26.45■■□□□ 1.82
RAB40C-212ENST00000569575 ARIH2O95376 493 aa26.45■■□□□ 1.82
RAB40C-212ENST00000569575 TXKP42681 527 aa26.45■■□□□ 1.82
RAB40C-212ENST00000569575 ITGB3BPQ13352 177 aaPredicted RBP26.45■■□□□ 1.82
RAB40C-212ENST00000569575 B3GNT9Q6UX72 402 aa26.45■■□□□ 1.82
RAB40C-212ENST00000569575 PPTC7Q8NI37 304 aa26.45■■□□□ 1.82
RAB40C-212ENST00000569575 ZNF333Q96JL9 665 aa26.45■■□□□ 1.82
RAB40C-212ENST00000569575 UPF3AQ9H1J1 476 aaKnown RBP26.45■■□□□ 1.82
RAB40C-212ENST00000569575 PAK6Q9NQU5 681 aaPredicted RBP26.45■■□□□ 1.82
RAB40C-212ENST00000569575 PPFIA4O75335 1185 aa26.44■■□□□ 1.82
RAB40C-212ENST00000569575 CCND3P30281 292 aaPredicted RBP26.44■■□□□ 1.82
RAB40C-212ENST00000569575 LONP1P36776 959 aaKnown RBP26.44■■□□□ 1.82
RAB40C-212ENST00000569575 CPT1AP50416 773 aa26.44■■□□□ 1.82
RAB40C-212ENST00000569575 GJA9P57773 515 aa26.44■■□□□ 1.82
RAB40C-212ENST00000569575 ARHGAP1Q07960 439 aa26.44■■□□□ 1.82
RAB40C-212ENST00000569575 CYFIP1Q7L576 1253 aa26.44■■□□□ 1.82
RAB40C-212ENST00000569575 KCTD17Q8N5Z5 321 aa26.44■■□□□ 1.82
RAB40C-212ENST00000569575 ZNF579Q8NAF0 562 aaKnown RBP26.44■■□□□ 1.82
RAB40C-212ENST00000569575 SPATA32Q96LK8 384 aa26.44■■□□□ 1.82
RAB40C-212ENST00000569575 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.44■■□□□ 1.821e-10■■■■■ 39.4
RAB40C-212ENST00000569575 ELP1O95163 1332 aa26.43■■□□□ 1.82
RAB40C-212ENST00000569575 ATG7O95352 703 aa26.43■■□□□ 1.82
RAB40C-212ENST00000569575 NCLP19338 710 aaKnown RBP26.43■■□□□ 1.82
RAB40C-212ENST00000569575 CEBPZQ03701 1054 aaKnown RBP26.43■■□□□ 1.82
RAB40C-212ENST00000569575 TLK2Q86UE8 772 aa26.43■■□□□ 1.82
RAB40C-212ENST00000569575 IGSF22Q8N9C0 903 aa26.43■■□□□ 1.82
RAB40C-212ENST00000569575 KRI1Q8N9T8 703 aaKnown RBP26.43■■□□□ 1.82
RAB40C-212ENST00000569575 SEPT1Q8WYJ6 367 aa26.43■■□□□ 1.82
RAB40C-212ENST00000569575 GBP4Q96PP9 640 aa26.43■■□□□ 1.82
RAB40C-212ENST00000569575 TCHHQ07283 1943 aa26.42■■□□□ 1.82
RAB40C-212ENST00000569575 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.42■■□□□ 1.82
RAB40C-212ENST00000569575 A6NJR5 290 aa26.42■■□□□ 1.82
RAB40C-212ENST00000569575 WDR64B1ANS9 1081 aa26.42■■□□□ 1.82
RAB40C-212ENST00000569575 NOP56O00567 594 aaKnown RBP26.42■■□□□ 1.82
RAB40C-212ENST00000569575 ZEB2O60315 1214 aa26.42■■□□□ 1.82
RAB40C-212ENST00000569575 ARRDC4Q8NCT1 418 aa26.42■■□□□ 1.82
RAB40C-212ENST00000569575 OR6J1Q8NGC5 347 aa26.42■■□□□ 1.82
RAB40C-212ENST00000569575 ERMNQ8TAM6 284 aa26.42■■□□□ 1.82
RAB40C-212ENST00000569575 NEK9Q8TD19 979 aa26.42■■□□□ 1.82
RAB40C-212ENST00000569575 SPATA33Q96N06 139 aa26.42■■□□□ 1.82
RAB40C-212ENST00000569575 VAV3Q9UKW4 847 aa26.42■■□□□ 1.82
RAB40C-212ENST00000569575 PCDHA10Q9Y5I2 948 aa26.42■■□□□ 1.82
RAB40C-212ENST00000569575 DKC1O60832 514 aaKnown RBP eCLIP26.41■■□□□ 1.82
RAB40C-212ENST00000569575 HOXD8P13378 290 aaPredicted RBP26.41■■□□□ 1.82
RAB40C-212ENST00000569575 CCL5P13501 91 aa26.41■■□□□ 1.82
RAB40C-212ENST00000569575 MUTP22033 750 aa26.41■■□□□ 1.82
RAB40C-212ENST00000569575 CST5P28325 142 aaPredicted RBP26.41■■□□□ 1.82
RAB40C-212ENST00000569575 SPIRE1Q08AE8 756 aa26.41■■□□□ 1.82
RAB40C-212ENST00000569575 FOXD4L6Q3SYB3 417 aaPredicted RBP26.41■■□□□ 1.82
RAB40C-212ENST00000569575 MIS18BP1Q6P0N0 1132 aa26.41■■□□□ 1.82
RAB40C-212ENST00000569575 FOXD4L3Q6VB84 417 aaPredicted RBP26.41■■□□□ 1.82
RAB40C-212ENST00000569575 LEO1Q8WVC0 666 aaPredicted RBP26.41■■□□□ 1.82
RAB40C-212ENST00000569575 MCOLN1Q9GZU1 580 aa26.41■■□□□ 1.82
RAB40C-212ENST00000569575 XPNPEP3Q9NQH7 507 aa26.41■■□□□ 1.82
RAB40C-212ENST00000569575 DYNC1LI2O43237 492 aaPredicted RBP26.4■■□□□ 1.82
RAB40C-212ENST00000569575 CUTAO60888 179 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms