RNA–Protein interactions for RNA: ENST00000569338.5

BBS4-217, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 5

Gene BBS4, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-217ENST00000569338 VIPR1P32241 457 aa6.31□□□□□ -1.4
BBS4-217ENST00000569338 GRK3P35626 688 aa6.31□□□□□ -1.4
BBS4-217ENST00000569338 YBX1P67809 324 aaKnown RBP6.31□□□□□ -1.4
BBS4-217ENST00000569338 SRSF3P84103 164 aaKnown RBP6.31□□□□□ -1.4
BBS4-217ENST00000569338 GUCY1A3Q02108 690 aa6.31□□□□□ -1.4
BBS4-217ENST00000569338 FAM50AQ14320 339 aaKnown RBP6.31□□□□□ -1.4
BBS4-217ENST00000569338 TRIM61Q5EBN2 209 aa6.31□□□□□ -1.4
BBS4-217ENST00000569338 ZC3H14Q6PJT7 736 aaKnown RBP6.31□□□□□ -1.4
BBS4-217ENST00000569338 DDX42Q86XP3 938 aaKnown RBP eCLIP6.31□□□□□ -1.4
BBS4-217ENST00000569338 DCP2Q8IU60 420 aaKnown RBP6.31□□□□□ -1.4
BBS4-217ENST00000569338 RIOX2Q8IUF8 465 aa6.31□□□□□ -1.4
BBS4-217ENST00000569338 UBR7Q8N806 425 aa6.31□□□□□ -1.4
BBS4-217ENST00000569338 FBXO15Q8NCQ5 510 aaPredicted RBP6.31□□□□□ -1.4
BBS4-217ENST00000569338 SLC7A14Q8TBB6 771 aa6.31□□□□□ -1.4
BBS4-217ENST00000569338 PMM1Q92871 262 aa6.31□□□□□ -1.4
BBS4-217ENST00000569338 TSR2Q969E8 191 aaKnown RBP6.31□□□□□ -1.4
BBS4-217ENST00000569338 MFSD3Q96ES6 412 aa6.31□□□□□ -1.4
BBS4-217ENST00000569338 PEX11GQ96HA9 241 aa6.31□□□□□ -1.4
BBS4-217ENST00000569338 EPB41L1Q9H4G0 881 aa6.31□□□□□ -1.4
BBS4-217ENST00000569338 PCDHA9Q9Y5H5 950 aa6.31□□□□□ -1.4
BBS4-217ENST00000569338 PCDHA8Q9Y5H6 950 aa6.31□□□□□ -1.4
BBS4-217ENST00000569338 FMN1Q68DA7 1419 aa6.31□□□□□ -1.4
BBS4-217ENST00000569338 WDR97A6NE52 1622 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.3□□□□□ -1.4
BBS4-217ENST00000569338 FAM47E-STBD1D6RA91 191 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 CCER2I3L3R5 266 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 HRKO00198 91 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 CRTAMO95727 393 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 STAT3P40763 770 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 MAPKAPK2P49137 400 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 PAK1Q13153 545 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 PLEKHN1Q494U1 663 aaPredicted RBP6.3□□□□□ -1.4
BBS4-217ENST00000569338 FNDC3BQ53EP0 1204 aaKnown RBP6.3□□□□□ -1.4
BBS4-217ENST00000569338 GORABQ5T7V8 394 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 TMC6Q7Z403 805 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 NIM1KQ8IY84 436 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 SYNPOQ8N3V7 929 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 GSTCDQ8NEC7 633 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 MAGEB10Q96LZ2 347 aaPredicted RBP6.3□□□□□ -1.4
BBS4-217ENST00000569338 CEP89Q96ST8 783 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 JAM3Q9BX67 310 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 AP5M1Q9H0R1 490 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 CDIP1Q9H305 208 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 SIRT5Q9NXA8 310 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 HCFC2Q9Y5Z7 792 aa6.3□□□□□ -1.4
BBS4-217ENST00000569338 A0A087X0B3 334 aa6.29□□□□□ -1.4
BBS4-217ENST00000569338 MYOCOSA0A1B0GUC4 107 aa6.29□□□□□ -1.4
BBS4-217ENST00000569338 PEX10O60683 326 aa6.29□□□□□ -1.4
BBS4-217ENST00000569338 DGKIO75912 1065 aa6.29□□□□□ -1.4
BBS4-217ENST00000569338 FARP2O94887 1054 aaPredicted RBP6.29□□□□□ -1.4
BBS4-217ENST00000569338 PRR5P85299 388 aa6.29□□□□□ -1.4
BBS4-217ENST00000569338 EXOSC10Q01780 885 aaKnown RBP6.29□□□□□ -1.4
BBS4-217ENST00000569338 BRAPQ7Z569 592 aa6.29□□□□□ -1.4
BBS4-217ENST00000569338 CHAC2Q8WUX2 184 aa6.29□□□□□ -1.4
BBS4-217ENST00000569338 SEC14L1Q92503 715 aa6.29□□□□□ -1.4
BBS4-217ENST00000569338 NINJ1Q92982 152 aa6.29□□□□□ -1.4
BBS4-217ENST00000569338 CLUHP3Q96NS8 147 aa6.29□□□□□ -1.4
BBS4-217ENST00000569338 KCNJ15Q99712 375 aa6.29□□□□□ -1.4
BBS4-217ENST00000569338 MCOLN1Q9GZU1 580 aa6.29□□□□□ -1.4
BBS4-217ENST00000569338 IPPKQ9H8X2 491 aa6.29□□□□□ -1.4
BBS4-217ENST00000569338 SIT1Q9Y3P8 196 aa6.29□□□□□ -1.4
BBS4-217ENST00000569338 SAMD9Q5K651 1589 aa6.28□□□□□ -1.4
BBS4-217ENST00000569338 RASGRP1O95267 797 aa6.28□□□□□ -1.4
BBS4-217ENST00000569338 ZBTB7AO95365 584 aa6.28□□□□□ -1.4
BBS4-217ENST00000569338 SRGAP2CP0DJJ0 459 aa6.28□□□□□ -1.4
BBS4-217ENST00000569338 GNAT1P11488 350 aa6.28□□□□□ -1.4
BBS4-217ENST00000569338 SLC6A11P48066 632 aa6.28□□□□□ -1.4
BBS4-217ENST00000569338 CHRNA2Q15822 529 aa6.28□□□□□ -1.4
BBS4-217ENST00000569338 OGFOD2Q6N063 350 aa6.28□□□□□ -1.4
BBS4-217ENST00000569338 ZC3H7AQ8IWR0 971 aaKnown RBP6.28□□□□□ -1.4
BBS4-217ENST00000569338 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.28□□□□□ -1.4
BBS4-217ENST00000569338 KCNN1Q92952 543 aa6.28□□□□□ -1.4
BBS4-217ENST00000569338 TRIM39Q9HCM9 518 aa6.28□□□□□ -1.4
BBS4-217ENST00000569338 MAGEC2Q9UBF1 373 aaPredicted RBP6.28□□□□□ -1.4
BBS4-217ENST00000569338 EHBP1L1Q8N3D4 1523 aa6.28□□□□□ -1.4
BBS4-217ENST00000569338 SUPT6HQ7KZ85 1726 aaKnown RBP6.28□□□□□ -1.4
BBS4-217ENST00000569338 TEX51A0A1B0GUA7 166 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 ARVCFO00192 962 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 HGSO14964 777 aaPredicted RBP6.27□□□□□ -1.41
BBS4-217ENST00000569338 SGSM2O43147 1006 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 PRC1O43663 620 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 PDE8AO60658 829 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 ZNF200P98182 395 aaPredicted RBP6.27□□□□□ -1.41
BBS4-217ENST00000569338 SPIRE1Q08AE8 756 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 MESP2Q0VG99 397 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 PABPC4Q13310 644 aaKnown RBP eCLIP6.27□□□□□ -1.41
BBS4-217ENST00000569338 SLC9A5Q14940 896 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 STEAP3Q658P3 488 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 SYDE1Q6ZW31 735 aaPredicted RBP6.27□□□□□ -1.41
BBS4-217ENST00000569338 FGD2Q7Z6J4 655 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 MILR1Q7Z6M3 343 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 RNF180Q86T96 592 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 PCDH19Q8TAB3 1148 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 MORC4Q8TE76 937 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 ALG3Q92685 438 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 TSPAN17Q96FV3 270 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 SCLYQ96I15 445 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 FAM84AQ96KN4 292 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 PHLDB1Q86UU1 1377 aa6.27□□□□□ -1.41
BBS4-217ENST00000569338 GCC2Q8IWJ2 1684 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms