RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 SPATA33Q96N06 139 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 INPP4AQ96PE3 977 aaPredicted RBP10.72□□□□□ -0.69
UBR1-210ENST00000569337 PHF20Q9BVI0 1012 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 HIPK3Q9H422 1215 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 MLXIPQ9HAP2 919 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 SH3GLB2Q9NR46 395 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 FRMPD4Q14CM0 1322 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 TCHHQ07283 1943 aa10.72□□□□□ -0.69
UBR1-210ENST00000569337 SMCO2A6NFE2 343 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 LRRC37A2A6NM11 1700 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 SPATA31C2B4DYI2 1134 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 FIBPO43427 364 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 PPFIA4O75335 1185 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 UBA1P22314 1058 aaKnown RBP10.71□□□□□ -0.69
UBR1-210ENST00000569337 CYP2C18P33260 490 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 SP2Q02086 613 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 PTPN11Q06124 597 aaPredicted RBP10.71□□□□□ -0.69
UBR1-210ENST00000569337 PPIGQ13427 754 aaKnown RBP eCLIP10.71□□□□□ -0.69
UBR1-210ENST00000569337 NEDD9Q14511 834 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 HSDL1Q3SXM5 330 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 C9orf50Q5SZB4 431 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 PPP1R18Q6NYC8 613 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 NFRKBQ6P4R8 1299 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 NLRX1Q86UT6 975 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 PPP1R13LQ8WUF5 828 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 WASF1Q92558 559 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 C8orf76Q96K31 380 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 ZMYND12Q9H0C1 365 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 EHMT1Q9H9B1 1298 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 RIC8AQ9NPQ8 531 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 TRMT13Q9NUP7 481 aaKnown RBP10.71□□□□□ -0.69
UBR1-210ENST00000569337 PCDHA6Q9UN73 950 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 NOD1Q9Y239 953 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 MYH15Q9Y2K3 1946 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 PCDHA8Q9Y5H6 950 aa10.71□□□□□ -0.69
UBR1-210ENST00000569337 ESYT2A0FGR8 921 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 KIF28PB7ZC32 967 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 M0R2N6 131 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 NOP56O00567 594 aaKnown RBP10.7□□□□□ -0.7
UBR1-210ENST00000569337 FOSP01100 380 aaPredicted RBP10.7□□□□□ -0.7
UBR1-210ENST00000569337 MMP1P03956 469 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 CYP2C9P11712 490 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 CSF2RAP15509 400 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 ICAM3P32942 547 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 ADCY7P51828 1080 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 EPHB4P54760 987 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 CCL23P55773 120 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 CYFIP1Q7L576 1253 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 TEX2Q8IWB9 1127 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 RASGRP4Q8TDF6 673 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 TNFRSF25Q93038 417 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 RNPC3Q96LT9 517 aaKnown RBP10.7□□□□□ -0.7
UBR1-210ENST00000569337 NOC4LQ9BVI4 516 aaKnown RBP10.7□□□□□ -0.7
UBR1-210ENST00000569337 KATNAL1Q9BW62 490 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 GLT8D2Q9H1C3 349 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 PCDHA4Q9UN74 947 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 MTMR6Q9Y217 621 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 ZDHHC9Q9Y397 364 aa10.7□□□□□ -0.7
UBR1-210ENST00000569337 FAM205CA6NFA0 338 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 BTBD18B2RXH4 712 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 STX6O43752 255 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 ZNF286BP0CG31 522 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 PSEN2P49810 448 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 NLRP5P59047 1200 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 SEMA3FQ13275 785 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 NR5A1Q13285 461 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 KIAA0753Q2KHM9 967 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 EARS2Q5JPH6 523 aaKnown RBP10.69□□□□□ -0.7
UBR1-210ENST00000569337 GPR153Q6NV75 609 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 C7orf31Q8N865 590 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 DAGLBQ8NCG7 672 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 GIMAP8Q8ND71 665 aaPredicted RBP10.69□□□□□ -0.7
UBR1-210ENST00000569337 CCDC148Q8NFR7 591 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 CCDC12Q8WUD4 166 aaPredicted RBP10.69□□□□□ -0.7
UBR1-210ENST00000569337 KAT2BQ92831 832 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 GPRASP2Q96D09 838 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 CDHR1Q96JP9 859 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 SENP7Q9BQF6 1050 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 BCAS3Q9H6U6 928 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 TMEM260Q9NX78 707 aa10.69□□□□□ -0.7
UBR1-210ENST00000569337 UMODL1Q5DID0 1318 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 VPS37CA5D8V6 355 aaPredicted RBP10.68□□□□□ -0.7
UBR1-210ENST00000569337 MAFGO15525 162 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 EDIL3O43854 480 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 F2P00734 622 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 ACRP10323 421 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 HOXD8P13378 290 aaPredicted RBP10.68□□□□□ -0.7
UBR1-210ENST00000569337 ITGB5P18084 799 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 CLK2P49760 499 aaKnown RBP10.68□□□□□ -0.7
UBR1-210ENST00000569337 AP3B2Q13367 1082 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 MTMR1Q13613 665 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 MFSD10Q14728 455 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 PTGISQ16647 500 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 TMEM240Q5SV17 173 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 FOXD4L5Q5VV16 416 aaPredicted RBP10.68□□□□□ -0.7
UBR1-210ENST00000569337 PSRC1Q6PGN9 363 aaPredicted RBP10.68□□□□□ -0.7
UBR1-210ENST00000569337 METTL7BQ6UX53 244 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 SESTD1Q86VW0 696 aa10.68□□□□□ -0.7
UBR1-210ENST00000569337 DIS3L2Q8IYB7 885 aaKnown RBP10.68□□□□□ -0.7
UBR1-210ENST00000569337 RPUSD2Q8IZ73 545 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms