RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 TICAM2Q86XR7 235 aa13□□□□□ -0.33
CHRFAM7A-206ENST00000569278 ESR2Q92731 530 aa13□□□□□ -0.33
CHRFAM7A-206ENST00000569278 HLA-CQ95604 372 aa13□□□□□ -0.33
CHRFAM7A-206ENST00000569278 TBC1D32Q96NH3 1257 aa13□□□□□ -0.33
CHRFAM7A-206ENST00000569278 IWS1Q96ST2 819 aa13□□□□□ -0.33
CHRFAM7A-206ENST00000569278 MTUS1Q9ULD2 1270 aa13□□□□□ -0.33
CHRFAM7A-206ENST00000569278 NOD1Q9Y239 953 aa13□□□□□ -0.33
CHRFAM7A-206ENST00000569278 TELO2Q9Y4R8 837 aa13□□□□□ -0.33
CHRFAM7A-206ENST00000569278 MUC6Q6W4X9 2439 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 SORBS3O60504 671 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 CDC45O75419 566 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 LGR5O75473 907 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 NR3C2P08235 984 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 UBA1P22314 1058 aaKnown RBP12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 KCNJ6P48051 423 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 PTK7Q13308 1070 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 SEC23AQ15436 765 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 STXBP2Q15833 593 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 DGKDQ16760 1214 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 KIAA0753Q2KHM9 967 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 ASPRV1Q53RT3 343 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 PLPP6Q8IY26 295 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 DDX27Q96GQ7 796 aaKnown RBP12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 ZSCAN10Q96SZ4 725 aaPredicted RBP12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 PDCD2LQ9BRP1 358 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 C17orf80Q9BSJ5 609 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 C16orf70Q9BSU1 422 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 ALG1Q9BT22 464 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 C1QTNF1Q9BXJ1 281 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 MAF1Q9H063 256 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 ZSWIM5Q9P217 1185 aa12.99□□□□□ -0.33
CHRFAM7A-206ENST00000569278 RALGAPA2Q2PPJ7 1873 aa12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 ABHD14A-ACY1A0A1B0GW23 586 aa12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 CASTP20810 708 aaKnown RBP12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 RBM25P49756 843 aaKnown RBP12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 HTRA4P83105 476 aaPredicted RBP12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 PPP1R15BQ5SWA1 713 aa12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 TTC22Q5TAA0 569 aa12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 MYSM1Q5VVJ2 828 aa12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 SERINC5Q86VE9 423 aa12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 SKAP1Q86WV1 359 aa12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 CCDC155Q8N6L0 562 aa12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 MPHOSPH6Q99547 160 aaKnown RBP12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 RAD9AQ99638 391 aa12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 RNF41Q9H4P4 317 aaPredicted RBP12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 UBE2ZQ9H832 354 aaPredicted RBP12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 SENP2Q9HC62 589 aa12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 LMCD1Q9NZU5 365 aa12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 BAZ2BQ9UIF8 2168 aaKnown RBP12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 USP34Q70CQ2 3546 aa12.98□□□□□ -0.33
CHRFAM7A-206ENST00000569278 FRMPD4Q14CM0 1322 aa12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 KIF28PB7ZC32 967 aa12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 EIF3JO75822 258 aaKnown RBP12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 LINC00271P0C7V0 271 aa12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 HOXA13P31271 388 aaPredicted RBP12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 SEMA3FQ13275 785 aa12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 PGM5Q15124 567 aa12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 CELF3Q5SZQ8 465 aaKnown RBP12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 FAM117BQ6P1L5 589 aa12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 CWC27Q6UX04 472 aaKnown RBP12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 STOX1Q6ZVD7 989 aa12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 CYB5R4Q7L1T6 521 aa12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 FBXO11Q86XK2 927 aa12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 RILPL2Q969X0 211 aa12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 FAM122AQ96E09 287 aa12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 TGS1Q96RS0 853 aaKnown RBP12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 C22orf23Q9BZE7 217 aa12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 KAT14Q9H8E8 782 aa12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 MAD2L2Q9UI95 211 aa12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 MRVI1Q9Y6F6 885 aa12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 TAF6LQ9Y6J9 622 aa12.97□□□□□ -0.33
CHRFAM7A-206ENST00000569278 MYO7AQ13402 2215 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 TRIM6-TRIM34B2RNG4 842 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 B4DLN1 442 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 ZNF213O14771 459 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 CYTH3O43739 400 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 GGPS1O95749 300 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 CFBP00751 764 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 PARP1P09874 1014 aaKnown RBP12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 IL9P15248 144 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 MRPL12P52815 198 aaKnown RBP12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 LAMC2Q13753 1193 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 COL19A1Q14993 1142 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 PLEKHG4Q58EX7 1191 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 ARHGEF16Q5VV41 709 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 MCF2L2Q86YR7 1114 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 C7orf31Q8N865 590 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 DBF4BQ8NFT6 615 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 DSCC1Q9BVC3 393 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 KATNAL1Q9BW62 490 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 VAT1LQ9HCJ6 419 aa12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 MRPL11Q9Y3B7 192 aaKnown RBP12.96□□□□□ -0.33
CHRFAM7A-206ENST00000569278 KIAA1671Q9BY89 1806 aa12.95□□□□□ -0.34
CHRFAM7A-206ENST00000569278 PIEZO1Q92508 2521 aa12.95□□□□□ -0.34
CHRFAM7A-206ENST00000569278 PALM3A6NDB9 673 aaPredicted RBP12.95□□□□□ -0.34
CHRFAM7A-206ENST00000569278 PI4K2BG5E9Z4 385 aa12.95□□□□□ -0.34
CHRFAM7A-206ENST00000569278 GPR37L1O60883 481 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms