RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 USH1GQ495M9 461 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 CELF3Q5SZQ8 465 aaKnown RBP10.14□□□□□ -0.79
SMG1-216ENST00000569122 MYSM1Q5VVJ2 828 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 FAM43BQ6ZT52 329 aaPredicted RBP10.14□□□□□ -0.79
SMG1-216ENST00000569122 RSPH3Q86UC2 560 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 UBALD2Q8IYN6 164 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 SYTL5Q8TDW5 730 aaPredicted RBP10.14□□□□□ -0.79
SMG1-216ENST00000569122 WNT8BQ93098 351 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 NKD2Q969F2 451 aaPredicted RBP10.14□□□□□ -0.79
SMG1-216ENST00000569122 ASIC4Q96FT7 647 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 RPGRIP1Q96KN7 1286 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 CDCA3Q99618 268 aaPredicted RBP10.14□□□□□ -0.79
SMG1-216ENST00000569122 TMEM47Q9BQJ4 181 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 USP26Q9BXU7 913 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 TUT1Q9H6E5 874 aaKnown RBP10.14□□□□□ -0.79
SMG1-216ENST00000569122 MLXIPQ9HAP2 919 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 INCENPQ9NQS7 918 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 MAP3K20Q9NYL2 800 aaKnown RBP10.14□□□□□ -0.79
SMG1-216ENST00000569122 ANAPC4Q9UJX5 808 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 CACNA1HO95180 2353 aa10.13□□□□□ -0.79
SMG1-216ENST00000569122 RPLP2P05387 115 aaKnown RBP10.13□□□□□ -0.79
SMG1-216ENST00000569122 PCP11498 1178 aaKnown RBP10.13□□□□□ -0.79
SMG1-216ENST00000569122 HOXC8P31273 242 aa10.13□□□□□ -0.79
SMG1-216ENST00000569122 NT5C2P49902 561 aa10.13□□□□□ -0.79
SMG1-216ENST00000569122 FAM26DQ5JW98 314 aa10.13□□□□□ -0.79
SMG1-216ENST00000569122 ASCL5Q7RTU5 278 aa10.13□□□□□ -0.79
SMG1-216ENST00000569122 SIRT2Q8IXJ6 389 aa10.13□□□□□ -0.79
SMG1-216ENST00000569122 SAMD3Q8N6K7 520 aa10.13□□□□□ -0.79
SMG1-216ENST00000569122 TAAR1Q96RJ0 339 aa10.13□□□□□ -0.79
SMG1-216ENST00000569122 ALG13Q9NP73 1137 aaKnown RBP10.13□□□□□ -0.79
SMG1-216ENST00000569122 TOMM22Q9NS69 142 aa10.13□□□□□ -0.79
SMG1-216ENST00000569122 ZBTB40Q9NUA8 1239 aa10.13□□□□□ -0.79
SMG1-216ENST00000569122 RNF216Q9NWF9 866 aaPredicted RBP10.13□□□□□ -0.79
SMG1-216ENST00000569122 CLEC1BQ9P126 229 aa10.13□□□□□ -0.79
SMG1-216ENST00000569122 USP15Q9Y4E8 981 aaPredicted RBP10.13□□□□□ -0.79
SMG1-216ENST00000569122 TECTAO75443 2155 aa10.13□□□□□ -0.79
SMG1-216ENST00000569122 TRIOO75962 3097 aa10.13□□□□□ -0.79
SMG1-216ENST00000569122 C5orf42Q9H799 3197 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 SIP14410 1827 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 NOP56O00567 594 aaKnown RBP10.12□□□□□ -0.79
SMG1-216ENST00000569122 LINC01565O15544 149 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 TREHO43280 583 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 CTSHP09668 335 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 FGRP09769 529 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 SMIM10L2AP0DMW4 78 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 SMIM10L2BP0DMW5 78 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 SNHG28P0DPA3 235 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 GTF2F1P35269 517 aaKnown RBP eCLIP10.12□□□□□ -0.79
SMG1-216ENST00000569122 UBE3AQ05086 875 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 HSDL1Q3SXM5 330 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 CCDC178Q5BJE1 867 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 PDE12Q6L8Q7 609 aaKnown RBP10.12□□□□□ -0.79
SMG1-216ENST00000569122 CMTR2Q8IYT2 770 aaKnown RBP10.12□□□□□ -0.79
SMG1-216ENST00000569122 PANK1Q8TE04 598 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 ZNF689Q96CS4 500 aaPredicted RBP10.12□□□□□ -0.79
SMG1-216ENST00000569122 NEK1Q96PY6 1258 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 C16orf70Q9BSU1 422 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 RNPEPQ9H4A4 650 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 TLE6Q9H808 572 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 ZNF215Q9UL58 517 aaPredicted RBP10.12□□□□□ -0.79
SMG1-216ENST00000569122 NR2E1Q9Y466 385 aa10.12□□□□□ -0.79
SMG1-216ENST00000569122 ENPP3O14638 875 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 GGPS1O95749 300 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 LINC00271P0C7V0 271 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 STAG3L1P0CL83 205 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 EIF2AK2P19525 551 aaKnown RBP10.11□□□□□ -0.79
SMG1-216ENST00000569122 NRIP1P48552 1158 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 CTDSPL2Q05D32 466 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 TRAF1Q13077 416 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 MAPK8IP2Q13387 824 aaPredicted RBP10.11□□□□□ -0.79
SMG1-216ENST00000569122 MTMR3Q13615 1198 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 ZMYM1Q5SVZ6 1142 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 TAF2Q6P1X5 1199 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 RASGRP2Q7LDG7 609 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 SPPL3Q8TCT6 385 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 MICAL1Q8TDZ2 1067 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 SUSD6Q92537 303 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 FTHL17Q9BXU8 183 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 SEMA4AQ9H3S1 761 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 PXMP2Q9NR77 195 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 AAASQ9NRG9 546 aa10.11□□□□□ -0.79
SMG1-216ENST00000569122 CCDC171Q6TFL3 1326 aa10.1□□□□□ -0.79
SMG1-216ENST00000569122 NRCAMQ92823 1304 aa10.1□□□□□ -0.79
SMG1-216ENST00000569122 CCER2I3L3R5 266 aa10.1□□□□□ -0.79
SMG1-216ENST00000569122 DGKIO75912 1065 aa10.1□□□□□ -0.79
SMG1-216ENST00000569122 HOXB8P17481 243 aaPredicted RBP10.1□□□□□ -0.79
SMG1-216ENST00000569122 NEDD9Q14511 834 aa10.1□□□□□ -0.79
SMG1-216ENST00000569122 HIC1Q14526 733 aa10.1□□□□□ -0.79
SMG1-216ENST00000569122 ALX1Q15699 326 aa10.1□□□□□ -0.79
SMG1-216ENST00000569122 CDC37Q16543 378 aaPredicted RBP10.1□□□□□ -0.79
SMG1-216ENST00000569122 GNPTABQ3T906 1256 aa10.1□□□□□ -0.79
SMG1-216ENST00000569122 RRP12Q5JTH9 1297 aaKnown RBP10.1□□□□□ -0.79
SMG1-216ENST00000569122 VSIG10LQ86VR7 867 aa10.1□□□□□ -0.79
SMG1-216ENST00000569122 ADSSL1Q8N142 457 aa10.1□□□□□ -0.79
SMG1-216ENST00000569122 POF1BQ8WVV4 589 aa10.1□□□□□ -0.79
SMG1-216ENST00000569122 RC3H2Q9HBD1 1191 aaKnown RBP10.1□□□□□ -0.79
SMG1-216ENST00000569122 PCDHB12Q9Y5F1 795 aa10.1□□□□□ -0.79
SMG1-216ENST00000569122 TTC41PQ6P2S7 1318 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 STAM2O75886 525 aa10.09□□□□□ -0.79
SMG1-216ENST00000569122 CSPG5O95196 566 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms