RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 EPB41L1Q9H4G0 881 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 ZSWIM4Q9H7M6 989 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 PTCH2Q9Y6C5 1203 aa4.98□□□□□ -1.61
HMGB1P6-201ENST00000569046 TCRBV5S2A0A599 114 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 RFXAPO00287 272 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 HGSO14964 777 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 NKRFO15226 690 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 DGKIO75912 1065 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 SOD2P04179 222 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 COL6A2P12110 1019 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 GRK2P25098 689 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 GRK3P35626 688 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 STAT5AP42229 794 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 AFF3P51826 1226 aaKnown RBP4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 HTRA3P83110 453 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 RBM10P98175 930 aaKnown RBP4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 CACNB2Q08289 660 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 KIZQ2M2Z5 673 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 C2orf27AQ580R0 203 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 B3GNT8Q7Z7M8 397 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 MIB1Q86YT6 1006 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 RBM12BQ8IXT5 1001 aaKnown RBP4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 ZSCAN18Q8TBC5 510 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 PIP4K2CQ8TBX8 421 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 FNIP1Q8TF40 1166 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 THAP3Q8WTV1 239 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 DDX11Q96FC9 970 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 PWWP2AQ96N64 755 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 IPPKQ9H8X2 491 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 ZNF652Q9Y2D9 606 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 PCDHA8Q9Y5H6 950 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 MAP3K4Q9Y6R4 1608 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 ABCC2Q92887 1545 aa4.97□□□□□ -1.61
HMGB1P6-201ENST00000569046 SQSTM1Q13501 440 aa4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 NFE2L2Q16236 605 aa4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 CR1LQ2VPA4 569 aa4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 VWA3BQ502W6 1294 aa4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 ETV3LQ6ZN32 361 aa4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 DPH6Q7L8W6 267 aa4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 OTOP3Q7RTS5 596 aa4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 MAMDC2Q7Z304 686 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 ADGRG2Q8IZP9 1017 aa4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 TP53I13Q8NBR0 393 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 SLC7A14Q8TBB6 771 aa4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 IPO9Q96P70 1041 aaKnown RBP4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 SLC52A2Q9HAB3 445 aa4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 SLC6A20Q9NP91 592 aa4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 USP35Q9P2H5 1018 aa4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 FAN1Q9Y2M0 1017 aa4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 PCDHB4Q9Y5E5 795 aa4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 PCDHA9Q9Y5H5 950 aa4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 ZCCHC11Q5TAX3 1644 aaKnown RBP4.96□□□□□ -1.62
HMGB1P6-201ENST00000569046 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 FFAR3O14843 346 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 SLC27A2O14975 620 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 GABREP78334 506 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 DLX2Q07687 328 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 ZC3H12BQ5HYM0 836 aaKnown RBP4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 HABP4Q5JVS0 413 aaKnown RBP4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 TCERG1LQ5VWI1 586 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 STK32CQ86UX6 486 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 SIAH1Q8IUQ4 282 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 FAM126BQ8IXS8 530 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 ZSWIM2Q8NEG5 633 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 PCDH19Q8TAB3 1148 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 CLEC4DQ8WXI8 215 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 MRFAP1L1Q96HT8 127 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 GORASP1Q9BQQ3 440 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 SMOC1Q9H4F8 434 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 MYOTQ9UBF9 498 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 TELO2Q9Y4R8 837 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 PMF1-BGLAPU3KQ54 211 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 PTPRGP23470 1445 aa4.95□□□□□ -1.62
HMGB1P6-201ENST00000569046 A0A1B0GTL3 188 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 TCRBV5S4A2TA0A5A2 114 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 FAM47E-STBD1D6RA91 191 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 ARVCFO00192 962 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 AQP7O14520 342 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 TRIM13O60858 407 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 CRTAMO95727 393 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 LTFP02788 710 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 GNAT1P11488 350 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 GUCY1A3Q02108 690 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 CHRNA2Q15822 529 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 CD300LDQ6UXZ3 194 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 MTDHQ86UE4 582 aaKnown RBP4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 GSTCDQ8NEC7 633 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 SH3RF2Q8TEC5 729 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 SH3TC2Q8TF17 1288 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 ZNF526Q8TF50 670 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 FBXO41Q8TF61 875 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 SCLYQ96I15 445 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 ALG1Q9BT22 464 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 SPATA6Q9NWH7 488 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 DTLQ9NZJ0 730 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 ASH2LQ9UBL3 628 aa4.94□□□□□ -1.62
HMGB1P6-201ENST00000569046 NDOR1Q9UHB4 597 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms