RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	JPH1	Q9HDC5	661 aa	Predicted RBP	13.57	□□□□□ -0.24
FANCA-231	ENST00000568626	DDX20	Q9UHI6	824 aa	Known RBP	13.57	□□□□□ -0.24
FANCA-231	ENST00000568626	FRMPD3	Q5JV73	1810 aa		13.57	□□□□□ -0.24
FANCA-231	ENST00000568626	GGPS1	O95749	300 aa		13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	SMPD1	P17405	629 aa		13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	CAPN2	P17655	700 aa		13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	CCND3	P30281	292 aa	Predicted RBP	13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	KRT76	Q01546	638 aa		13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	PTGDR	Q13258	359 aa		13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	ITGB3BP	Q13352	177 aa	Predicted RBP	13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	LAMC2	Q13753	1193 aa		13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	STK38	Q15208	465 aa		13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	TMEM266	Q2M3C6	531 aa		13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	BRDT	Q58F21	947 aa	Predicted RBP	13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	CELF3	Q5SZQ8	465 aa	Known RBP	13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	TLK2	Q86UE8	772 aa		13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	MTMR9	Q96QG7	549 aa		13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	TEKT3	Q9BXF9	490 aa		13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	RAB34	Q9BZG1	259 aa		13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	MLXIP	Q9HAP2	919 aa		13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	SPC25	Q9HBM1	224 aa		13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	PAK6	Q9NQU5	681 aa	Predicted RBP	13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	GNE	Q9Y223	722 aa	Known RBP	13.56	□□□□□ -0.24
FANCA-231	ENST00000568626	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	NOP56	O00567	594 aa	Known RBP	13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	ATP9A	O75110	1047 aa		13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	PSMD10	O75832	226 aa		13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	FARP2	O94887	1054 aa	Predicted RBP	13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	CCL5	P13501	91 aa		13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	DNM1	Q05193	864 aa	Known RBP	13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	ARHGAP1	Q07960	439 aa		13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	LY6K	Q17RY6	165 aa		13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	DHX37	Q8IY37	1157 aa	Known RBP	13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	RDM1	Q8NG50	284 aa		13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	OR6J1	Q8NGC5	347 aa		13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	KCNG4	Q8TDN1	519 aa		13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	HAS1	Q92839	578 aa		13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	FERMT2	Q96AC1	680 aa		13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	AP5M1	Q9H0R1	490 aa		13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	TMEM60	Q9H2L4	133 aa		13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	PKD2L1	Q9P0L9	805 aa		13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	SLC9A2	Q9UBY0	812 aa		13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	CLIC4	Q9Y696	253 aa		13.55	□□□□□ -0.24
FANCA-231	ENST00000568626	WDR64	B1ANS9	1081 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	DHX15	O43143	795 aa	Known RBP	13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	ADCY6	O43306	1168 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	PPP6R2	O75170	966 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	NCL	P19338	710 aa	Known RBP	13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	SFN	P31947	248 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	CPT1A	P50416	773 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	FXR2	P51116	673 aa	Known RBP eCLIP	13.54	□□□□□ -0.24	3e-6	■□□□□ 9.9
FANCA-231	ENST00000568626	JAK3	P52333	1124 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	GJA9	P57773	515 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	NKX3-2	P78367	333 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	SP2	Q02086	613 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	PPP2R5C	Q13362	524 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	SLC39A14	Q15043	492 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	PTPA	Q15257	358 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	DTHD1	Q6ZMT9	781 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	CYFIP1	Q7L576	1253 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	C4orf32	Q8N8J7	132 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	PPTC7	Q8NI37	304 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	RNF208	Q9H0X6	261 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	UNC93B1	Q9H1C4	597 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	UPF3A	Q9H1J1	476 aa	Known RBP	13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	TTC12	Q9H892	705 aa	Predicted RBP	13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	XPNPEP3	Q9NQH7	507 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	VAV3	Q9UKW4	847 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	PCDHA12	Q9UN75	941 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	STK24	Q9Y6E0	443 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	ELP1	O95163	1332 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	SYNRG	Q9UMZ2	1314 aa		13.54	□□□□□ -0.24
FANCA-231	ENST00000568626	DOCK5	Q9H7D0	1870 aa		13.53	□□□□□ -0.24
FANCA-231	ENST00000568626	SPTLC2	O15270	562 aa		13.53	□□□□□ -0.24
FANCA-231	ENST00000568626	CST5	P28325	142 aa	Predicted RBP	13.53	□□□□□ -0.24
FANCA-231	ENST00000568626	TXK	P42681	527 aa		13.53	□□□□□ -0.24
FANCA-231	ENST00000568626	CEBPZ	Q03701	1054 aa	Known RBP	13.53	□□□□□ -0.24
FANCA-231	ENST00000568626	CSPP1	Q1MSJ5	1256 aa		13.53	□□□□□ -0.24
FANCA-231	ENST00000568626	B3GNT9	Q6UX72	402 aa		13.53	□□□□□ -0.24
FANCA-231	ENST00000568626	LINC00301	Q8NCQ3	95 aa		13.53	□□□□□ -0.24
FANCA-231	ENST00000568626	TNPO1	Q92973	898 aa	Known RBP	13.53	□□□□□ -0.24
FANCA-231	ENST00000568626	SPATA33	Q96N06	139 aa		13.53	□□□□□ -0.24
FANCA-231	ENST00000568626		A6NJR5	290 aa		13.52	□□□□□ -0.25
FANCA-231	ENST00000568626	DDX39A	O00148	427 aa	Known RBP	13.52	□□□□□ -0.25
FANCA-231	ENST00000568626	DYNC1LI2	O43237	492 aa	Predicted RBP	13.52	□□□□□ -0.25
FANCA-231	ENST00000568626	ZEB2	O60315	1214 aa		13.52	□□□□□ -0.25
FANCA-231	ENST00000568626	KPNA6	O60684	536 aa		13.52	□□□□□ -0.25
FANCA-231	ENST00000568626	ADAMTS4	O75173	837 aa		13.52	□□□□□ -0.25
FANCA-231	ENST00000568626	GJB1	P08034	283 aa		13.52	□□□□□ -0.25
FANCA-231	ENST00000568626	C6orf222	P0C671	652 aa	Predicted RBP	13.52	□□□□□ -0.25
FANCA-231	ENST00000568626	HOXD8	P13378	290 aa	Predicted RBP	13.52	□□□□□ -0.25
FANCA-231	ENST00000568626	ACTR2	P61160	394 aa		13.52	□□□□□ -0.25
FANCA-231	ENST00000568626	PDIA5	Q14554	519 aa		13.52	□□□□□ -0.25
FANCA-231	ENST00000568626	MTFR1	Q15390	333 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms