RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 CEP170P1Q96L14 293 aa13.45□□□□□ -0.26
TMEM170A-205ENST00000568559 SUGCTQ9HAC7 445 aa13.45□□□□□ -0.26
TMEM170A-205ENST00000568559 PRDM10Q9NQV6 1147 aa13.45□□□□□ -0.26
TMEM170A-205ENST00000568559 EMILIN3Q9NT22 766 aa13.45□□□□□ -0.26
TMEM170A-205ENST00000568559 FRMD4BQ9Y2L6 1034 aa13.45□□□□□ -0.26
TMEM170A-205ENST00000568559 TKFCQ3LXA3 575 aa13.45□□□□□ -0.26
TMEM170A-205ENST00000568559 MIS18BP1Q6P0N0 1132 aa13.45□□□□□ -0.26
TMEM170A-205ENST00000568559 KIAA1328Q86T90 577 aa13.45□□□□□ -0.26
TMEM170A-205ENST00000568559 EIF2AK1Q9BQI3 630 aaKnown RBP13.45□□□□□ -0.26
TMEM170A-205ENST00000568559 WDR18Q9BV38 432 aa13.45□□□□□ -0.26
TMEM170A-205ENST00000568559 PPARDQ03181 441 aa13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 ARHGAP29Q52LW3 1261 aa13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 ZNF831Q5JPB2 1677 aa13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 CNTNAP1P78357 1384 aa13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 SFI1A8K8P3 1242 aa13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 SREBF1P36956 1147 aa13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 PPATQ06203 517 aa13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 DUOX1Q9NRD9 1551 aa13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 WDR64B1ANS9 1081 aa13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 CXCL11O14625 94 aa13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 CSPG5O95196 566 aa13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 PSAPP07602 524 aa13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 EPB41P11171 864 aaKnown RBP13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 PDXDC2PQ6P474 469 aa13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 IGSF22Q8N9C0 903 aa13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 RANBP17Q9H2T7 1088 aaKnown RBP13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 PCDHB13Q9Y5F0 798 aa13.44□□□□□ -0.26
TMEM170A-205ENST00000568559 KCNJ18B7U540 433 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 K7ENM7 598 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 TBX3O15119 743 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 POLGP54098 1239 aaPredicted RBP13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 KCNJ12Q14500 433 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 RDH13Q8NBN7 331 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 SPAG5Q96R06 1193 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 MXRA8Q9BRK3 442 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 NRBP2Q9NSY0 501 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 COL4A1P02462 1669 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 PPP1R11O60927 126 aaPredicted RBP13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 USP2O75604 605 aaPredicted RBP13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 CNGA1P29973 690 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 CA8P35219 290 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 KRT76Q01546 638 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 TAF1CQ15572 869 aaPredicted RBP13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 FAM160B1Q5W0V3 765 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 BTNL9Q6UXG8 535 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 METTL13Q8N6R0 699 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 CHST13Q8NET6 341 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 P2RX7Q99572 595 aaKnown RBP13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 LUC7LQ9NQ29 371 aaKnown RBP13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 SAMSN1Q9NSI8 373 aaKnown RBP13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 IKBKBO14920 756 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 MSH4O15457 936 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 GTF2A2P52657 109 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 HIRAP54198 1017 aaPredicted RBP13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 CYP2W1Q8TAV3 490 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 EXOC3O60645 756 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 URI1O94763 535 aaPredicted RBP13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 JAK3P52333 1124 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 STRN3Q13033 797 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 ANKRD13CQ8N6S4 541 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 GOLGA6L1Q8N7Z2 621 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 LXNQ9BS40 222 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 SLC38A10Q9HBR0 1119 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 KCNH7Q9NS40 1196 aa13.43□□□□□ -0.26
TMEM170A-205ENST00000568559 NID2Q14112 1375 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 ACTN4O43707 911 aaKnown RBP13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 COPB2P35606 906 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 IGBP1P78318 339 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 KIF22Q14807 665 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 SPA17Q15506 151 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 MTERF2Q49AM1 385 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 USP37Q86T82 979 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 SYTL5Q8TDW5 730 aaPredicted RBP13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 EXOC7Q9UPT5 735 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 HPSEQ9Y251 543 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 ENOX1Q8TC92 643 aaKnown RBP13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 P2RX5Q93086 422 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 DHTKD1Q96HY7 919 aaPredicted RBP13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 RREB1Q92766 1687 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 CCDC88AQ3V6T2 1871 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 SLC25A27O95847 323 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 P4HBP07237 508 aaKnown RBP13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 HERVK_113P62684 666 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 MUM1L1Q5H9M0 696 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 UNC13DQ70J99 1090 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 GPRC5AQ8NFJ5 357 aa13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.42□□□□□ -0.26
TMEM170A-205ENST00000568559 WNT7AO00755 349 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 MEIS2O14770 477 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 ZSCAN12O43309 604 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 ATP1A3P13637 1013 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 QARSP47897 775 aaKnown RBP13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 DNM2P50570 870 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 CYP2J2P51589 502 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 EPHA7Q15375 998 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 SWSAP1Q6NVH7 229 aa13.41□□□□□ -0.26
TMEM170A-205ENST00000568559 NEK11Q8NG66 645 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms