RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 TANC1Q9C0D5 1861 aa16.55■□□□□ 0.24
CMTM3-215ENST00000568477 H3BRB1 525 aa16.55■□□□□ 0.24
CMTM3-215ENST00000568477 EPB41L2O43491 1005 aaKnown RBP16.55■□□□□ 0.24
CMTM3-215ENST00000568477 SELPP16109 830 aa16.55■□□□□ 0.24
CMTM3-215ENST00000568477 ADCY7P51828 1080 aa16.55■□□□□ 0.24
CMTM3-215ENST00000568477 RBL2Q08999 1139 aa16.55■□□□□ 0.24
CMTM3-215ENST00000568477 DHX38Q92620 1227 aaKnown RBP16.55■□□□□ 0.24
CMTM3-215ENST00000568477 GPR20Q99678 358 aa16.55■□□□□ 0.24
CMTM3-215ENST00000568477 USP26Q9BXU7 913 aa16.55■□□□□ 0.24
CMTM3-215ENST00000568477 FTOQ9C0B1 505 aaKnown RBP eCLIP16.55■□□□□ 0.24
CMTM3-215ENST00000568477 TUT1Q9H6E5 874 aaKnown RBP16.55■□□□□ 0.24
CMTM3-215ENST00000568477 RIC8AQ9NPQ8 531 aa16.55■□□□□ 0.24
CMTM3-215ENST00000568477 MSRAQ9UJ68 235 aa16.55■□□□□ 0.24
CMTM3-215ENST00000568477 COL6A3P12111 3177 aa16.55■□□□□ 0.24
CMTM3-215ENST00000568477 SCN5AQ14524 2016 aa16.54■□□□□ 0.24
CMTM3-215ENST00000568477 STXBP3O00186 592 aa16.54■□□□□ 0.24
CMTM3-215ENST00000568477 PBX2P40425 430 aa16.54■□□□□ 0.24
CMTM3-215ENST00000568477 SP4Q02446 784 aa16.54■□□□□ 0.24
CMTM3-215ENST00000568477 PTK7Q13308 1070 aa16.54■□□□□ 0.24
CMTM3-215ENST00000568477 TYW1BQ6NUM6 668 aa16.54■□□□□ 0.24
CMTM3-215ENST00000568477 LRRC8DQ7L1W4 858 aa16.54■□□□□ 0.24
CMTM3-215ENST00000568477 FBXL16Q8N461 479 aa16.54■□□□□ 0.24
CMTM3-215ENST00000568477 SLC17A8Q8NDX2 589 aa16.54■□□□□ 0.24
CMTM3-215ENST00000568477 MYLIPQ8WY64 445 aa16.54■□□□□ 0.24
CMTM3-215ENST00000568477 GLT8D2Q9H1C3 349 aa16.54■□□□□ 0.24
CMTM3-215ENST00000568477 ZNF576Q9H609 170 aa16.54■□□□□ 0.24
CMTM3-215ENST00000568477 BARHL2Q9NY43 387 aa16.54■□□□□ 0.24
CMTM3-215ENST00000568477 UBIAD1Q9Y5Z9 338 aa16.54■□□□□ 0.24
CMTM3-215ENST00000568477 NID2Q14112 1375 aa16.53■□□□□ 0.24
CMTM3-215ENST00000568477 MYO9BQ13459 2157 aa16.53■□□□□ 0.24
CMTM3-215ENST00000568477 PARNO95453 639 aaKnown RBP16.53■□□□□ 0.24
CMTM3-215ENST00000568477 FOSP01100 380 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-215ENST00000568477 ITGB5P18084 799 aa16.53■□□□□ 0.24
CMTM3-215ENST00000568477 ADD1P35611 737 aaKnown RBP16.53■□□□□ 0.24
CMTM3-215ENST00000568477 MTMR1Q13613 665 aa16.53■□□□□ 0.24
CMTM3-215ENST00000568477 ZNF215Q9UL58 517 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-215ENST00000568477 TRIP12Q14669 1992 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-215ENST00000568477 C17orf102A2RUQ5 167 aa16.52■□□□□ 0.24
CMTM3-215ENST00000568477 SMCO2A6NFE2 343 aa16.52■□□□□ 0.24
CMTM3-215ENST00000568477 SMIM10L2AP0DMW4 78 aa16.52■□□□□ 0.24
CMTM3-215ENST00000568477 SMIM10L2BP0DMW5 78 aa16.52■□□□□ 0.24
CMTM3-215ENST00000568477 CKBP12277 381 aa16.52■□□□□ 0.24
CMTM3-215ENST00000568477 FOSL2P15408 326 aa16.52■□□□□ 0.24
CMTM3-215ENST00000568477 KCNA2P16389 499 aa16.52■□□□□ 0.24
CMTM3-215ENST00000568477 ATP2A2P16615 1042 aaKnown RBP16.52■□□□□ 0.24
CMTM3-215ENST00000568477 ZNF200P98182 395 aaPredicted RBP16.52■□□□□ 0.24
CMTM3-215ENST00000568477 GRIN2CQ14957 1233 aa16.52■□□□□ 0.24
CMTM3-215ENST00000568477 PFKFB3Q16875 520 aaPredicted RBP16.52■□□□□ 0.24
CMTM3-215ENST00000568477 TRIM71Q2Q1W2 868 aaKnown RBP16.52■□□□□ 0.24
CMTM3-215ENST00000568477 UTP14CQ5TAP6 766 aaKnown RBP16.52■□□□□ 0.24
CMTM3-215ENST00000568477 TRIM50Q86XT4 487 aa16.52■□□□□ 0.24
CMTM3-215ENST00000568477 AGXT2Q9BYV1 514 aa16.52■□□□□ 0.24
CMTM3-215ENST00000568477 JADE2Q9NQC1 790 aa16.52■□□□□ 0.24
CMTM3-215ENST00000568477 TET1Q8NFU7 2136 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 DOCK5Q9H7D0 1870 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 MAFGO15525 162 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 ATP9AO75110 1047 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 BAIAP3O94812 1187 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 SCG2P13521 617 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 AP3B2Q13367 1082 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 HIC1Q14526 733 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 SERINC5Q86VE9 423 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 ATP6V0A1Q93050 837 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 WNT8BQ93098 351 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 PGBD1Q96JS3 809 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 SLC9A7Q96T83 725 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 ANO3Q9BYT9 981 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 NKX2-4Q9H2Z4 354 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 PKD2L1Q9P0L9 805 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 TELO2Q9Y4R8 837 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 PCDHA11Q9Y5I1 949 aa16.51■□□□□ 0.23
CMTM3-215ENST00000568477 GNAT1P11488 350 aa16.5■□□□□ 0.23
CMTM3-215ENST00000568477 HOXC8P31273 242 aa16.5■□□□□ 0.23
CMTM3-215ENST00000568477 TCF7P36402 384 aaPredicted RBP16.5■□□□□ 0.23
CMTM3-215ENST00000568477 RABGGTBP53611 331 aa16.5■□□□□ 0.23
CMTM3-215ENST00000568477 AKAP17AQ02040 695 aaKnown RBP16.5■□□□□ 0.23
CMTM3-215ENST00000568477 RUFY3Q7L099 469 aa16.5■□□□□ 0.23
CMTM3-215ENST00000568477 MAFAQ8NHW3 353 aaPredicted RBP16.5■□□□□ 0.23
CMTM3-215ENST00000568477 CCDC12Q8WUD4 166 aaPredicted RBP16.5■□□□□ 0.23
CMTM3-215ENST00000568477 MXRA8Q9BRK3 442 aa16.5■□□□□ 0.23
CMTM3-215ENST00000568477 SLC28A3Q9HAS3 691 aa16.5■□□□□ 0.23
CMTM3-215ENST00000568477 ZSWIM6Q9HCJ5 1215 aa16.5■□□□□ 0.23
CMTM3-215ENST00000568477 TSHZ2Q9NRE2 1034 aa16.5■□□□□ 0.23
CMTM3-215ENST00000568477 YBX2Q9Y2T7 364 aaKnown RBP16.5■□□□□ 0.23
CMTM3-215ENST00000568477 CUL9Q8IWT3 2517 aa16.49■□□□□ 0.23
CMTM3-215ENST00000568477 ESYT2A0FGR8 921 aa16.49■□□□□ 0.23
CMTM3-215ENST00000568477 PRPF3O43395 683 aaKnown RBP16.49■□□□□ 0.23
CMTM3-215ENST00000568477 NBNO60934 754 aa16.49■□□□□ 0.23
CMTM3-215ENST00000568477 CXCL10P02778 98 aa16.49■□□□□ 0.23
CMTM3-215ENST00000568477 SREBF1P36956 1147 aa16.49■□□□□ 0.23
CMTM3-215ENST00000568477 THPOP40225 353 aa16.49■□□□□ 0.23
CMTM3-215ENST00000568477 KCNJ6P48051 423 aa16.49■□□□□ 0.23
CMTM3-215ENST00000568477 ZNF618Q5T7W0 954 aa16.49■□□□□ 0.23
CMTM3-215ENST00000568477 CNKSR3Q6P9H4 555 aa16.49■□□□□ 0.23
CMTM3-215ENST00000568477 PHOSPHO2Q8TCD6 241 aa16.49■□□□□ 0.23
CMTM3-215ENST00000568477 SEPT1Q8WYJ6 367 aa16.49■□□□□ 0.23
CMTM3-215ENST00000568477 RNPEPQ9H4A4 650 aa16.49■□□□□ 0.23
CMTM3-215ENST00000568477 KCNH7Q9NS40 1196 aa16.49■□□□□ 0.23
CMTM3-215ENST00000568477 TMEM260Q9NX78 707 aa16.49■□□□□ 0.23
CMTM3-215ENST00000568477 CYP46A1Q9Y6A2 500 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms