RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 IGFBP4P22692 258 aa10.91□□□□□ -0.66
SF3B3-211ENST00000568291 CPT1AP50416 773 aa10.91□□□□□ -0.66
SF3B3-211ENST00000568291 SEMA3FQ13275 785 aa10.91□□□□□ -0.66
SF3B3-211ENST00000568291 ADGRE1Q14246 886 aa10.91□□□□□ -0.66
SF3B3-211ENST00000568291 NTRK3Q16288 839 aa10.91□□□□□ -0.66
SF3B3-211ENST00000568291 JAKMIP3Q5VZ66 844 aa10.91□□□□□ -0.66
SF3B3-211ENST00000568291 DHX37Q8IY37 1157 aaKnown RBP10.91□□□□□ -0.66
SF3B3-211ENST00000568291 CYP2W1Q8TAV3 490 aa10.91□□□□□ -0.66
SF3B3-211ENST00000568291 AIFM3Q96NN9 605 aa10.91□□□□□ -0.66
SF3B3-211ENST00000568291 ALG1Q9BT22 464 aa10.91□□□□□ -0.66
SF3B3-211ENST00000568291 SLC28A3Q9HAS3 691 aa10.91□□□□□ -0.66
SF3B3-211ENST00000568291 MAP3K20Q9NYL2 800 aaKnown RBP10.91□□□□□ -0.66
SF3B3-211ENST00000568291 MYH7BA7E2Y1 1941 aa10.91□□□□□ -0.66
SF3B3-211ENST00000568291 PIK3CDO00329 1044 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 ATP9AO75110 1047 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 MMP3P08254 477 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 ITGB5P18084 799 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 UBA1P22314 1058 aaKnown RBP10.9□□□□□ -0.66
SF3B3-211ENST00000568291 RABGGTBP53611 331 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 CCDC85BQ15834 202 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-211ENST00000568291 HSDL1Q3SXM5 330 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 CELF3Q5SZQ8 465 aaKnown RBP10.9□□□□□ -0.66
SF3B3-211ENST00000568291 MYSM1Q5VVJ2 828 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 PPP2R2DQ66LE6 453 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 CYFIP1Q7L576 1253 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 RPUSD2Q8IZ73 545 aaKnown RBP10.9□□□□□ -0.66
SF3B3-211ENST00000568291 RASGRP4Q8TDF6 673 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 KAT2BQ92831 832 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 SPATA33Q96N06 139 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 MTG1Q9BT17 334 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-211ENST00000568291 TM6SF1Q9BZW5 370 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 MAF1Q9H063 256 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 MLXIPQ9HAP2 919 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 BARHL2Q9NY43 387 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 TPCN1Q9ULQ1 816 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 SLC4A7Q9Y6M7 1214 aa10.9□□□□□ -0.66
SF3B3-211ENST00000568291 CHD9Q3L8U1 2897 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 BRWD1Q9NSI6 2320 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 SPDYE3A6NKU9 549 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 SPATA31C2B4DYI2 1134 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 TNFRSF10AO00220 468 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 NKRFO15226 690 aaKnown RBP eCLIP10.89□□□□□ -0.67
SF3B3-211ENST00000568291 PRPF3O43395 683 aaKnown RBP10.89□□□□□ -0.67
SF3B3-211ENST00000568291 EPB41L2O43491 1005 aaKnown RBP10.89□□□□□ -0.67
SF3B3-211ENST00000568291 PFKMP08237 780 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 SUPT20HL2P0C7V6 817 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 SCG2P13521 617 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 ATP2A2P16615 1042 aaKnown RBP10.89□□□□□ -0.67
SF3B3-211ENST00000568291 ADCY7P51828 1080 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 AK2P54819 239 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 EVCP57679 992 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 ZNF200P98182 395 aaPredicted RBP10.89□□□□□ -0.67
SF3B3-211ENST00000568291 PFKFB3Q16875 520 aaPredicted RBP10.89□□□□□ -0.67
SF3B3-211ENST00000568291 C8orf34Q49A92 452 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 DEFB128Q7Z7B8 93 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 MICALL1Q8N3F8 863 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 FBXL16Q8N461 479 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 SAMD3Q8N6K7 520 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 NECAB1Q8N987 351 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 ATXN2LQ8WWM7 1075 aaKnown RBP10.89□□□□□ -0.67
SF3B3-211ENST00000568291 VWCEQ96DN2 955 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 RIC8AQ9NPQ8 531 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 GJB4Q9NTQ9 266 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 VPS54Q9P1Q0 977 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 PCDHA11Q9Y5I1 949 aa10.89□□□□□ -0.67
SF3B3-211ENST00000568291 CCDC196A0A1B0GTZ2 297 aa10.88□□□□□ -0.67
SF3B3-211ENST00000568291 LARGE1O95461 756 aa10.88□□□□□ -0.67
SF3B3-211ENST00000568291 MYOGP15173 224 aa10.88□□□□□ -0.67
SF3B3-211ENST00000568291 NEK4P51957 841 aa10.88□□□□□ -0.67
SF3B3-211ENST00000568291 AKAP17AQ02040 695 aaKnown RBP10.88□□□□□ -0.67
SF3B3-211ENST00000568291 SCRN1Q12765 414 aa10.88□□□□□ -0.67
SF3B3-211ENST00000568291 LAMC2Q13753 1193 aa10.88□□□□□ -0.67
SF3B3-211ENST00000568291 HIC1Q14526 733 aa10.88□□□□□ -0.67
SF3B3-211ENST00000568291 BRDTQ58F21 947 aaPredicted RBP10.88□□□□□ -0.67
SF3B3-211ENST00000568291 UTP14CQ5TAP6 766 aaKnown RBP10.88□□□□□ -0.67
SF3B3-211ENST00000568291 PCNX4Q63HM2 1172 aa10.88□□□□□ -0.67
SF3B3-211ENST00000568291 IL27Q8NEV9 243 aa10.88□□□□□ -0.67
SF3B3-211ENST00000568291 ADAMTS19Q8TE59 1207 aa10.88□□□□□ -0.67
SF3B3-211ENST00000568291 INPP4AQ96PE3 977 aaPredicted RBP10.88□□□□□ -0.67
SF3B3-211ENST00000568291 SSUH2Q9Y2M2 353 aa10.88□□□□□ -0.67
SF3B3-211ENST00000568291 FRMPD4Q14CM0 1322 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 CHD7Q9P2D1 2997 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 SIP14410 1827 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 CPLX1O14810 134 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 ARP10275 920 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 ACTN1P12814 892 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 IFNAR1P17181 557 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 PSEN2P49810 448 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 FOSBP53539 338 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 RCAN1P53805 252 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 MRPS5P82675 430 aaKnown RBP10.87□□□□□ -0.67
SF3B3-211ENST00000568291 SSRP1Q08945 709 aaKnown RBP10.87□□□□□ -0.67
SF3B3-211ENST00000568291 MFSD10Q14728 455 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 DGKDQ16760 1214 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 GDF6Q6KF10 455 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-211ENST00000568291 NFRKBQ6P4R8 1299 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 TRIM50Q86XT4 487 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 PPTC7Q8NI37 304 aa10.87□□□□□ -0.67
SF3B3-211ENST00000568291 ZNF274Q96GC6 653 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-211ENST00000568291 ASB2Q96Q27 587 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms