RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 TTLL1O95922 423 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 AK2P54819 239 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 HUNKP57058 714 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 PLAURQ03405 335 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 APOBRQ0VD83 1088 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 SPP2Q13103 211 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 TOB2Q14106 344 aaPredicted RBP9.04□□□□□ -0.96
SMG1-214ENST00000568038 ZYXQ15942 572 aaKnown RBP9.04□□□□□ -0.96
SMG1-214ENST00000568038 TMEM164Q5U3C3 297 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 RCSD1Q6JBY9 416 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 C16orf46Q6P387 395 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 SHISA2Q6UWI4 295 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 DGKHQ86XP1 1220 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 SIAH1Q8IUQ4 282 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 LRRC47Q8N1G4 583 aaKnown RBP9.04□□□□□ -0.96
SMG1-214ENST00000568038 ACER1Q8TDN7 264 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 BRF1Q92994 677 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 TTC14Q96N46 770 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 TMEM47Q9BQJ4 181 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 LPIN3Q9BQK8 851 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 MTA3Q9BTC8 594 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 KAT14Q9H8E8 782 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 LY9Q9HBG7 655 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 TPSG1Q9NRR2 321 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 NYAP2Q9P242 653 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 ABT1Q9ULW3 272 aaKnown RBP9.04□□□□□ -0.96
SMG1-214ENST00000568038 ZHX2Q9Y6X8 837 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 PAPPA2Q9BXP8 1791 aa9.04□□□□□ -0.96
SMG1-214ENST00000568038 A0A1W2PRG0 241 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 CCDC69A6NI79 296 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 TRIM75PA6NK02 468 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 TMEM88BA6NKF7 163 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 C9orf172C9J069 976 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 ATG7O95352 703 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 TOP1P11387 765 aaKnown RBP9.03□□□□□ -0.96
SMG1-214ENST00000568038 ELNP15502 786 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 EIF2AK2P19525 551 aaKnown RBP9.03□□□□□ -0.96
SMG1-214ENST00000568038 BRD2P25440 801 aaKnown RBP9.03□□□□□ -0.96
SMG1-214ENST00000568038 LIFRP42702 1097 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 ECE1P42892 770 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 ERO1BQ86YB8 467 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 RAB11FIP4Q86YS3 637 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 ETFBKMTQ8IXQ9 262 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 TMTC2Q8N394 836 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 OPTNQ96CV9 577 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 FEZ1Q99689 392 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 MYL10Q9BUA6 226 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 SMG9Q9H0W8 520 aaKnown RBP9.03□□□□□ -0.96
SMG1-214ENST00000568038 AS3MTQ9HBK9 375 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 CXXC1Q9P0U4 656 aaPredicted RBP9.03□□□□□ -0.96
SMG1-214ENST00000568038 BRPF3Q9ULD4 1205 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 ATAD5Q96QE3 1844 aa9.03□□□□□ -0.96
SMG1-214ENST00000568038 DOCK1Q14185 1865 aa9.02□□□□□ -0.96
SMG1-214ENST00000568038 GREB1LQ9C091 1923 aaPredicted RBP9.02□□□□□ -0.97
SMG1-214ENST00000568038 KLF18A0A0U1RQI7 1052 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 UNCXA6NJT0 531 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 J3QW42 95 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 SELPP16109 830 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 NOVP48745 357 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 ZNF157P51786 506 aaPredicted RBP9.02□□□□□ -0.97
SMG1-214ENST00000568038 ANKRD1Q15327 319 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 SYNE3Q6ZMZ3 975 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 CATIPQ7Z7H3 387 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 SAPCD2Q86UD0 394 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 ZNF654Q8IZM8 581 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 NUP133Q8WUM0 1156 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 ANKS1AQ92625 1134 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 WDR18Q9BV38 432 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 AGXT2Q9BYV1 514 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 ALDH8A1Q9H2A2 487 aaPredicted RBP9.02□□□□□ -0.97
SMG1-214ENST00000568038 C11orf16Q9NQ32 467 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 ISY1Q9ULR0 285 aaKnown RBP9.02□□□□□ -0.97
SMG1-214ENST00000568038 AFG3L2Q9Y4W6 797 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 SLC12A7Q9Y666 1083 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 KCNMB2Q9Y691 235 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 OTOFQ9HC10 1997 aa9.02□□□□□ -0.97
SMG1-214ENST00000568038 PSAPP07602 524 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 RXRAP19793 462 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 GPLD1P80108 840 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 PPATQ06203 517 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 STK3Q13188 491 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 GRM1Q13255 1194 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 RGMBQ6NW40 437 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 APOA5Q6Q788 366 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 RASGRP2Q7LDG7 609 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 SGMS1Q86VZ5 419 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 MICU3Q86XE3 530 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 WFDC8Q8IUA0 241 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 CCDC144CPQ8IYA2 1237 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 SPICE1Q8N0Z3 855 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 FBXL16Q8N461 479 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 MKL1Q969V6 931 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 WNK4Q96J92 1243 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 SH2D4AQ9H788 454 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 TPCN1Q9ULQ1 816 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 LIMCH1Q9UPQ0 1083 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 TMX2Q9Y320 296 aa9.01□□□□□ -0.97
SMG1-214ENST00000568038 MYH4Q9Y623 1939 aa9□□□□□ -0.97
SMG1-214ENST00000568038 GOLGA8AA7E2F4 631 aa9□□□□□ -0.97
SMG1-214ENST00000568038 GOLGA8BA8MQT2 603 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms