RNA–Protein interactions for RNA: ENST00000567780.1

HOXC-AS3-204, HOXC cluster antisense RNA 3, humanhuman

Gene HOXC-AS3, Length 2,816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC-AS3-204ENST00000567780 KDM3AQ9Y4C1 1321 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 LRRIQ3A6PVS8 624 aaPredicted RBP13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 ALDH1B1P30837 517 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 LMAN1P49257 510 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 RASSF7Q02833 373 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 ICA1Q05084 483 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 GSPT2Q8IYD1 628 aaKnown RBP13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 TRIM58Q8NG06 486 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 IQCDQ96DY2 449 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 SH2D4AQ9H788 454 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 POLD4Q9HCU8 107 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 MED24O75448 989 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 MMP10P09238 476 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 HNRNPH3P31942 346 aaKnown RBP13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 FAM193AP78312 1265 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 MRPS25P82663 173 aaKnown RBP13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 KCNMA1Q12791 1236 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 HSP90B2PQ58FF3 399 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 BAP1Q92560 729 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 MTMR8Q96EF0 704 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 PURBQ96QR8 312 aaKnown RBP13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 LSM14BQ9BX40 385 aaKnown RBP13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 MYO3BQ8WXR4 1341 aa13.72□□□□□ -0.21
HOXC-AS3-204ENST00000567780 ANO9A1A5B4 782 aa13.71□□□□□ -0.21
HOXC-AS3-204ENST00000567780 BUB1O43683 1085 aa13.71□□□□□ -0.21
HOXC-AS3-204ENST00000567780 TUBBP07437 444 aa13.71□□□□□ -0.21
HOXC-AS3-204ENST00000567780 EPS15P42566 896 aa13.71□□□□□ -0.21
HOXC-AS3-204ENST00000567780 DNA2P51530 1060 aa13.71□□□□□ -0.21
HOXC-AS3-204ENST00000567780 POLR2FP61218 127 aaKnown RBP13.71□□□□□ -0.21
HOXC-AS3-204ENST00000567780 WDR93Q6P2C0 686 aa13.71□□□□□ -0.21
HOXC-AS3-204ENST00000567780 PDXDC1Q6P996 788 aa13.71□□□□□ -0.21
HOXC-AS3-204ENST00000567780 KRT27Q7Z3Y8 459 aa13.71□□□□□ -0.21
HOXC-AS3-204ENST00000567780 COG1Q8WTW3 980 aa13.71□□□□□ -0.21
HOXC-AS3-204ENST00000567780 JRKLQ9Y4A0 524 aa13.71□□□□□ -0.21
HOXC-AS3-204ENST00000567780 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.71□□□□□ -0.21
HOXC-AS3-204ENST00000567780 CYP11B2P19099 503 aa13.71□□□□□ -0.22
HOXC-AS3-204ENST00000567780 ARHGAP4P98171 946 aa13.71□□□□□ -0.22
HOXC-AS3-204ENST00000567780 PABPC4Q13310 644 aaKnown RBP eCLIP13.71□□□□□ -0.22
HOXC-AS3-204ENST00000567780 ZCWPW2Q504Y3 356 aa13.71□□□□□ -0.22
HOXC-AS3-204ENST00000567780 NFRKBQ6P4R8 1299 aa13.71□□□□□ -0.22
HOXC-AS3-204ENST00000567780 COL23A1Q86Y22 540 aaPredicted RBP13.71□□□□□ -0.22
HOXC-AS3-204ENST00000567780 NLGN1Q8N2Q7 840 aa13.71□□□□□ -0.22
HOXC-AS3-204ENST00000567780 EMILIN3Q9NT22 766 aa13.71□□□□□ -0.22
HOXC-AS3-204ENST00000567780 SMARCAL1Q9NZC9 954 aa13.71□□□□□ -0.22
HOXC-AS3-204ENST00000567780 PI4KBQ9UBF8 816 aa13.71□□□□□ -0.22
HOXC-AS3-204ENST00000567780 FAN1Q9Y2M0 1017 aa13.71□□□□□ -0.22
HOXC-AS3-204ENST00000567780 ABCB11O95342 1321 aa13.71□□□□□ -0.22
HOXC-AS3-204ENST00000567780 NCK2O43639 380 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 PSMC6P62333 389 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 ADAM9Q13443 819 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 SPICE1Q8N0Z3 855 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 SCFD1Q8WVM8 642 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 ZDHHC15Q96MV8 337 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 ALS2CR12Q96Q35 445 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 FAM198AQ9UFP1 575 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 SNX12Q9UMY4 172 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 F5H6K3 240 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 MEIS2O14770 477 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 HOXA13P31271 388 aaPredicted RBP13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 CYP4A11Q02928 519 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 KLRC3Q07444 240 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 FAM83BQ5T0W9 1011 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 SH3BP5LQ7L8J4 393 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 P2RX7Q99572 595 aaKnown RBP13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 NAP1L4Q99733 375 aaKnown RBP13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 EHD4Q9H223 541 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 KCNMB3Q9NPA1 279 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 EHD2Q9NZN4 543 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 SALL4Q9UJQ4 1053 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 MYH7BA7E2Y1 1941 aa13.7□□□□□ -0.22
HOXC-AS3-204ENST00000567780 ADAMTSL1Q8N6G6 1762 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 SPDYE3A6NKU9 549 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 PDE6BP35913 854 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 USP11P51784 963 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 RAPGEF1Q13905 1077 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 SFMBT2Q5VUG0 894 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 PODNQ7Z5L7 613 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 DCAF4Q8WV16 495 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 MASTLQ96GX5 879 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 RPGRIP1Q96KN7 1286 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 GLT8D2Q9H1C3 349 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 DHX36Q9H2U1 1008 aaKnown RBP13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 SLC9C1Q4G0N8 1177 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 ARSHQ5FYA8 562 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 HYIQ5T013 277 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 CCDC181Q5TID7 509 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 CATSPER3Q86XQ3 398 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 SIAH1Q8IUQ4 282 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 AMNQ9BXJ7 453 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 NYAP2Q9P242 653 aa13.69□□□□□ -0.22
HOXC-AS3-204ENST00000567780 CASP5P51878 434 aa13.68□□□□□ -0.22
HOXC-AS3-204ENST00000567780 HNRNPH2P55795 449 aaKnown RBP13.68□□□□□ -0.22
HOXC-AS3-204ENST00000567780 ABCB5Q2M3G0 1257 aa13.68□□□□□ -0.22
HOXC-AS3-204ENST00000567780 MAP9Q49MG5 647 aa13.68□□□□□ -0.22
HOXC-AS3-204ENST00000567780 HAUS3Q68CZ6 603 aa13.68□□□□□ -0.22
HOXC-AS3-204ENST00000567780 IQCEQ6IPM2 695 aa13.68□□□□□ -0.22
HOXC-AS3-204ENST00000567780 FBXO11Q86XK2 927 aa13.68□□□□□ -0.22
HOXC-AS3-204ENST00000567780 CREG2Q8IUH2 290 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms