RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ARNTL2Q8WYA1 636 aa21.4■■□□□ 1.02
LINC01238-205ENST00000567549 TNPO1Q92973 898 aaKnown RBP21.4■■□□□ 1.02
LINC01238-205ENST00000567549 GPRASP2Q96D09 838 aa21.4■■□□□ 1.02
LINC01238-205ENST00000567549 PSTPIP2Q9H939 334 aa21.4■■□□□ 1.02
LINC01238-205ENST00000567549 SENP2Q9HC62 589 aa21.4■■□□□ 1.02
LINC01238-205ENST00000567549 ANO2Q9NQ90 1003 aa21.4■■□□□ 1.02
LINC01238-205ENST00000567549 LMCD1Q9NZU5 365 aa21.4■■□□□ 1.02
LINC01238-205ENST00000567549 SPDYE3A6NKU9 549 aa21.39■■□□□ 1.01
LINC01238-205ENST00000567549 SH2B2O14492 632 aaPredicted RBP21.39■■□□□ 1.01
LINC01238-205ENST00000567549 MAFGO15525 162 aa21.39■■□□□ 1.01
LINC01238-205ENST00000567549 NBNO60934 754 aa21.39■■□□□ 1.01
LINC01238-205ENST00000567549 RPLP2P05387 115 aaKnown RBP21.39■■□□□ 1.01
LINC01238-205ENST00000567549 IRX6P78412 446 aaPredicted RBP21.39■■□□□ 1.01
LINC01238-205ENST00000567549 SP2Q02086 613 aa21.39■■□□□ 1.01
LINC01238-205ENST00000567549 SLC35G1Q2M3R5 365 aa21.39■■□□□ 1.01
LINC01238-205ENST00000567549 CYFIP1Q7L576 1253 aa21.39■■□□□ 1.01
LINC01238-205ENST00000567549 ESYT1Q9BSJ8 1104 aa21.39■■□□□ 1.01
LINC01238-205ENST00000567549 KAT6AQ92794 2004 aa21.39■■□□□ 1.01
LINC01238-205ENST00000567549 SLC27A2O14975 620 aa21.38■■□□□ 1.01
LINC01238-205ENST00000567549 SORBS3O60504 671 aa21.38■■□□□ 1.01
LINC01238-205ENST00000567549 GJB5O95377 273 aa21.38■■□□□ 1.01
LINC01238-205ENST00000567549 NEFLP07196 543 aa21.38■■□□□ 1.01
LINC01238-205ENST00000567549 SMIM10L2AP0DMW4 78 aa21.38■■□□□ 1.01
LINC01238-205ENST00000567549 SMIM10L2BP0DMW5 78 aa21.38■■□□□ 1.01
LINC01238-205ENST00000567549 MRPS9P82933 396 aaKnown RBP21.38■■□□□ 1.01
LINC01238-205ENST00000567549 TRIM71Q2Q1W2 868 aaKnown RBP21.38■■□□□ 1.01
LINC01238-205ENST00000567549 SEPT8Q92599 483 aa21.38■■□□□ 1.01
LINC01238-205ENST00000567549 APBB2Q92870 758 aa21.38■■□□□ 1.01
LINC01238-205ENST00000567549 TGS1Q96RS0 853 aaKnown RBP21.38■■□□□ 1.01
LINC01238-205ENST00000567549 RBM28Q9NW13 759 aaKnown RBP21.38■■□□□ 1.01
LINC01238-205ENST00000567549 INSL6Q9Y581 213 aa21.38■■□□□ 1.01
LINC01238-205ENST00000567549 CHD9Q3L8U1 2897 aa21.37■■□□□ 1.01
LINC01238-205ENST00000567549 CREB3L3Q68CJ9 461 aa21.37■■□□□ 1.01
LINC01238-205ENST00000567549 RSPH3Q86UC2 560 aa21.37■■□□□ 1.01
LINC01238-205ENST00000567549 GPR20Q99678 358 aa21.37■■□□□ 1.01
LINC01238-205ENST00000567549 MYL10Q9BUA6 226 aa21.37■■□□□ 1.01
LINC01238-205ENST00000567549 LSG1Q9H089 658 aaKnown RBP21.37■■□□□ 1.01
LINC01238-205ENST00000567549 PRDM6Q9NQX0 595 aa21.37■■□□□ 1.01
LINC01238-205ENST00000567549 RTEL1Q9NZ71 1219 aa21.37■■□□□ 1.01
LINC01238-205ENST00000567549 MTCH2Q9Y6C9 303 aa21.37■■□□□ 1.01
LINC01238-205ENST00000567549 NRCAMQ92823 1304 aa21.36■■□□□ 1.01
LINC01238-205ENST00000567549 HOXC8P31273 242 aa21.36■■□□□ 1.01
LINC01238-205ENST00000567549 BMP2KLQ5H9B9 411 aa21.36■■□□□ 1.01
LINC01238-205ENST00000567549 USP17L6PQ6QN14 398 aa21.36■■□□□ 1.01
LINC01238-205ENST00000567549 ADAMTS19Q8TE59 1207 aa21.36■■□□□ 1.01
LINC01238-205ENST00000567549 SAMD11Q96NU1 681 aa21.36■■□□□ 1.01
LINC01238-205ENST00000567549 GLT8D2Q9H1C3 349 aa21.36■■□□□ 1.01
LINC01238-205ENST00000567549 CERS4Q9HA82 394 aa21.36■■□□□ 1.01
LINC01238-205ENST00000567549 TAF6LQ9Y6J9 622 aa21.36■■□□□ 1.01
LINC01238-205ENST00000567549 hCG_1984214I3L0E3 225 aa21.35■■□□□ 1.01
LINC01238-205ENST00000567549 MEIS2O14770 477 aa21.35■■□□□ 1.01
LINC01238-205ENST00000567549 KRT32Q14532 448 aa21.35■■□□□ 1.01
LINC01238-205ENST00000567549 TAF2Q6P1X5 1199 aa21.35■■□□□ 1.01
LINC01238-205ENST00000567549 CENPQQ7L2Z9 268 aaPredicted RBP21.35■■□□□ 1.01
LINC01238-205ENST00000567549 SGMS1Q86VZ5 419 aa21.35■■□□□ 1.01
LINC01238-205ENST00000567549 ZNF713Q8N859 430 aaPredicted RBP21.35■■□□□ 1.01
LINC01238-205ENST00000567549 FANCBQ8NB91 859 aa21.35■■□□□ 1.01
LINC01238-205ENST00000567549 UHRF1Q96T88 793 aaPredicted RBP21.35■■□□□ 1.01
LINC01238-205ENST00000567549 RNPEPQ9H4A4 650 aa21.35■■□□□ 1.01
LINC01238-205ENST00000567549 HMGB1P09429 215 aaKnown RBP21.34■■□□□ 1.01
LINC01238-205ENST00000567549 DEFB103AP81534 67 aa21.34■■□□□ 1.01
LINC01238-205ENST00000567549 ZNF200P98182 395 aaPredicted RBP21.34■■□□□ 1.01
LINC01238-205ENST00000567549 MTMR1Q13613 665 aa21.34■■□□□ 1.01
LINC01238-205ENST00000567549 GPNMBQ14956 572 aa21.34■■□□□ 1.01
LINC01238-205ENST00000567549 NECTIN1Q15223 517 aa21.34■■□□□ 1.01
LINC01238-205ENST00000567549 PLEKHG4Q58EX7 1191 aa21.34■■□□□ 1.01
LINC01238-205ENST00000567549 UTP14CQ5TAP6 766 aaKnown RBP21.34■■□□□ 1.01
LINC01238-205ENST00000567549 SRBD1Q8N5C6 995 aaKnown RBP21.34■■□□□ 1.01
LINC01238-205ENST00000567549 GPKOWQ92917 476 aaPredicted RBP eCLIP21.34■■□□□ 1.01
LINC01238-205ENST00000567549 TTC28Q96AY4 2481 aa21.34■■□□□ 1.01
LINC01238-205ENST00000567549 PLEKHA8P1O95397 391 aa21.33■■□□□ 1.01
LINC01238-205ENST00000567549 FOSP01100 380 aaPredicted RBP21.33■■□□□ 1.01
LINC01238-205ENST00000567549 ERVK-21P61565 698 aa21.33■■□□□ 1.01
LINC01238-205ENST00000567549 PPP1R18Q6NYC8 613 aa21.33■■□□□ 1.01
LINC01238-205ENST00000567549 TMTC3Q6ZXV5 915 aa21.33■■□□□ 1.01
LINC01238-205ENST00000567549 MICU3Q86XE3 530 aa21.33■■□□□ 1.01
LINC01238-205ENST00000567549 MYOCDQ8IZQ8 938 aa21.33■■□□□ 1.01
LINC01238-205ENST00000567549 DBF4BQ8NFT6 615 aa21.33■■□□□ 1.01
LINC01238-205ENST00000567549 SEPT1Q8WYJ6 367 aa21.33■■□□□ 1.01
LINC01238-205ENST00000567549 HLA-CQ95604 372 aa21.33■■□□□ 1.01
LINC01238-205ENST00000567549 ZFP91Q96JP5 570 aaPredicted RBP21.33■■□□□ 1.01
LINC01238-205ENST00000567549 NEK1Q96PY6 1258 aa21.33■■□□□ 1.01
LINC01238-205ENST00000567549 ERAP1Q9NZ08 941 aa21.33■■□□□ 1.01
LINC01238-205ENST00000567549 PRRC2BQ5JSZ5 2229 aaKnown RBP21.33■■□□□ 1
LINC01238-205ENST00000567549 MICAL3Q7RTP6 2002 aa21.33■■□□□ 1
LINC01238-205ENST00000567549 CHD7Q9P2D1 2997 aa21.32■■□□□ 1
LINC01238-205ENST00000567549 TREHO43280 583 aa21.32■■□□□ 1
LINC01238-205ENST00000567549 TCF7P36402 384 aaPredicted RBP21.32■■□□□ 1
LINC01238-205ENST00000567549 ARHGAP4P98171 946 aa21.32■■□□□ 1
LINC01238-205ENST00000567549 SP4Q02446 784 aa21.32■■□□□ 1
LINC01238-205ENST00000567549 GRB10Q13322 594 aa21.32■■□□□ 1
LINC01238-205ENST00000567549 TRAF7Q6Q0C0 670 aa21.32■■□□□ 1
LINC01238-205ENST00000567549 HEATR3Q7Z4Q2 680 aa21.32■■□□□ 1
LINC01238-205ENST00000567549 GLG1Q92896 1179 aa21.32■■□□□ 1
LINC01238-205ENST00000567549 SMARCAD1Q9H4L7 1026 aa21.32■■□□□ 1
LINC01238-205ENST00000567549 PTPRSQ13332 1948 aa21.31■■□□□ 1
LINC01238-205ENST00000567549 SEMA3FQ13275 785 aa21.31■■□□□ 1
LINC01238-205ENST00000567549 PTPROQ16827 1216 aa21.31■■□□□ 1
LINC01238-205ENST00000567549 RPAINQ86UA6 219 aa21.31■■□□□ 1
LINC01238-205ENST00000567549 AZI2Q9H6S1 392 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms