RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 ARHGEF16Q5VV41 709 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 CYB5R4Q7L1T6 521 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 RETREG2Q8NC44 543 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 PPP1R13LQ8WUF5 828 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 MTMR8Q96EF0 704 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 PXMP2Q9NR77 195 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 MAP3K20Q9NYL2 800 aaKnown RBP10.68□□□□□ -0.7
CDH13-210ENST00000567445 MAD2L2Q9UI95 211 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 NOD1Q9Y239 953 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 PCDHA11Q9Y5I1 949 aa10.68□□□□□ -0.7
CDH13-210ENST00000567445 SCN5AQ14524 2016 aa10.67□□□□□ -0.7
CDH13-210ENST00000567445 PALM3A6NDB9 673 aaPredicted RBP10.67□□□□□ -0.7
CDH13-210ENST00000567445 OPLAHO14841 1288 aa10.67□□□□□ -0.7
CDH13-210ENST00000567445 ZBTB5O15062 677 aa10.67□□□□□ -0.7
CDH13-210ENST00000567445 PPP1R11O60927 126 aaPredicted RBP10.67□□□□□ -0.7
CDH13-210ENST00000567445 IQCF3P0C7M6 154 aa10.67□□□□□ -0.7
CDH13-210ENST00000567445 CASTP20810 708 aaKnown RBP10.67□□□□□ -0.7
CDH13-210ENST00000567445 CHMP4BP1P59074 171 aa10.67□□□□□ -0.7
CDH13-210ENST00000567445 PTGISQ16647 500 aa10.67□□□□□ -0.7
CDH13-210ENST00000567445 DGKDQ16760 1214 aa10.67□□□□□ -0.7
CDH13-210ENST00000567445 PPP2R2DQ66LE6 453 aa10.67□□□□□ -0.7
CDH13-210ENST00000567445 CHST3Q7LGC8 479 aa10.67□□□□□ -0.7
CDH13-210ENST00000567445 SESTD1Q86VW0 696 aa10.67□□□□□ -0.7
CDH13-210ENST00000567445 CCDC155Q8N6L0 562 aa10.67□□□□□ -0.7
CDH13-210ENST00000567445 RUFY2Q8WXA3 655 aa10.67□□□□□ -0.7
CDH13-210ENST00000567445 SYMPKQ92797 1274 aaKnown RBP10.67□□□□□ -0.7
CDH13-210ENST00000567445 KAT2BQ92831 832 aa10.67□□□□□ -0.7
CDH13-210ENST00000567445 EMID1Q96A84 441 aaPredicted RBP10.67□□□□□ -0.7
CDH13-210ENST00000567445 PCDHA1Q9Y5I3 950 aa10.67□□□□□ -0.7
CDH13-210ENST00000567445 CYP21A2P08686 494 aa10.66□□□□□ -0.7
CDH13-210ENST00000567445 MYOGP15173 224 aa10.66□□□□□ -0.7
CDH13-210ENST00000567445 CHMLP26374 656 aa10.66□□□□□ -0.7
CDH13-210ENST00000567445 TRAF1Q13077 416 aa10.66□□□□□ -0.7
CDH13-210ENST00000567445 ADGRE1Q14246 886 aa10.66□□□□□ -0.7
CDH13-210ENST00000567445 GRM4Q14833 912 aa10.66□□□□□ -0.7
CDH13-210ENST00000567445 STOX1Q6ZVD7 989 aa10.66□□□□□ -0.7
CDH13-210ENST00000567445 SAMD3Q8N6K7 520 aa10.66□□□□□ -0.7
CDH13-210ENST00000567445 PPTC7Q8NI37 304 aa10.66□□□□□ -0.7
CDH13-210ENST00000567445 CAGE1Q8TC20 777 aa10.66□□□□□ -0.7
CDH13-210ENST00000567445 PPM1EQ8WY54 764 aa10.66□□□□□ -0.7
CDH13-210ENST00000567445 CTAGE1Q96RT6 745 aa10.66□□□□□ -0.7
CDH13-210ENST00000567445 DDX41Q9UJV9 622 aaKnown RBP10.66□□□□□ -0.7
CDH13-210ENST00000567445 SUPT16HQ9Y5B9 1047 aaKnown RBP10.66□□□□□ -0.7
CDH13-210ENST00000567445 MRVI1Q9Y6F6 885 aa10.66□□□□□ -0.7
CDH13-210ENST00000567445 TRIP12Q14669 1992 aaPredicted RBP10.65□□□□□ -0.7
CDH13-210ENST00000567445 TANC1Q9C0D5 1861 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 ERICH2A1L162 156 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 IFIT3O14879 490 aaKnown RBP10.65□□□□□ -0.7
CDH13-210ENST00000567445 RNF40O75150 1001 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 IGFBP4P22692 258 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 PTH1RQ03431 593 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 LAMC2Q13753 1193 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 SART3Q15020 963 aaKnown RBP10.65□□□□□ -0.7
CDH13-210ENST00000567445 TMEM67Q5HYA8 995 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 TJAP1Q5JTD0 557 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 GDF6Q6KF10 455 aaPredicted RBP10.65□□□□□ -0.7
CDH13-210ENST00000567445 KCNV1Q6PIU1 500 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 DHX37Q8IY37 1157 aaKnown RBP10.65□□□□□ -0.7
CDH13-210ENST00000567445 PHOSPHO2Q8TCD6 241 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 AFAP1L1Q8TED9 768 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 SLC9A7Q96T83 725 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 PDCD2LQ9BRP1 358 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 KATNAL1Q9BW62 490 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 FTOQ9C0B1 505 aaKnown RBP eCLIP10.65□□□□□ -0.7
CDH13-210ENST00000567445 RIOX1Q9H6W3 641 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 PRDM6Q9NQX0 595 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 TET1Q8NFU7 2136 aa10.65□□□□□ -0.7
CDH13-210ENST00000567445 BAZ2BQ9UIF8 2168 aaKnown RBP10.65□□□□□ -0.71
CDH13-210ENST00000567445 BAIAP3O94812 1187 aa10.64□□□□□ -0.71
CDH13-210ENST00000567445 MYCLP12524 364 aaPredicted RBP10.64□□□□□ -0.71
CDH13-210ENST00000567445 HOXA13P31271 388 aaPredicted RBP10.64□□□□□ -0.71
CDH13-210ENST00000567445 PGM5Q15124 567 aa10.64□□□□□ -0.71
CDH13-210ENST00000567445 CCDC85BQ15834 202 aaPredicted RBP10.64□□□□□ -0.71
CDH13-210ENST00000567445 SLC35G1Q2M3R5 365 aa10.64□□□□□ -0.71
CDH13-210ENST00000567445 SWT1Q5T5J6 900 aaKnown RBP10.64□□□□□ -0.71
CDH13-210ENST00000567445 RALYLQ86SE5 291 aaKnown RBP10.64□□□□□ -0.71
CDH13-210ENST00000567445 HOMER1Q86YM7 354 aa10.64□□□□□ -0.71
CDH13-210ENST00000567445 C7orf31Q8N865 590 aa10.64□□□□□ -0.71
CDH13-210ENST00000567445 NCOA7Q8NI08 942 aa10.64□□□□□ -0.71
CDH13-210ENST00000567445 ATXN2LQ8WWM7 1075 aaKnown RBP10.64□□□□□ -0.71
CDH13-210ENST00000567445 PIGSQ96S52 555 aa10.64□□□□□ -0.71
CDH13-210ENST00000567445 SENP2Q9HC62 589 aa10.64□□□□□ -0.71
CDH13-210ENST00000567445 GTF2IRD1Q9UHL9 959 aa10.64□□□□□ -0.71
CDH13-210ENST00000567445 MUC3AQ02505 3323 aa10.63□□□□□ -0.71
CDH13-210ENST00000567445 PNMA6FA0A0J9YX94 578 aa10.63□□□□□ -0.71
CDH13-210ENST00000567445 E7EWF7 191 aa10.63□□□□□ -0.71
CDH13-210ENST00000567445 GCOM1H8Y6P7 765 aaPredicted RBP10.63□□□□□ -0.71
CDH13-210ENST00000567445 SGSM2O43147 1006 aa10.63□□□□□ -0.71
CDH13-210ENST00000567445 PPFIA4O75335 1185 aa10.63□□□□□ -0.71
CDH13-210ENST00000567445 PARNO95453 639 aaKnown RBP10.63□□□□□ -0.71
CDH13-210ENST00000567445 F2P00734 622 aa10.63□□□□□ -0.71
CDH13-210ENST00000567445 CA3P07451 260 aa10.63□□□□□ -0.71
CDH13-210ENST00000567445 POLR2MP0CAP2 368 aa10.63□□□□□ -0.71
CDH13-210ENST00000567445 ZNF286BP0CG31 522 aa10.63□□□□□ -0.71
CDH13-210ENST00000567445 HOXD8P13378 290 aaPredicted RBP10.63□□□□□ -0.71
CDH13-210ENST00000567445 SELPP16109 830 aa10.63□□□□□ -0.71
CDH13-210ENST00000567445 RBL2Q08999 1139 aa10.63□□□□□ -0.71
CDH13-210ENST00000567445 TROAPQ12815 778 aa10.63□□□□□ -0.71
CDH13-210ENST00000567445 WTAPQ15007 396 aa10.63□□□□□ -0.71
CDH13-210ENST00000567445 KIAA0753Q2KHM9 967 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms