RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 SLC27A2O14975 620 aa5.39□□□□□ -1.55
CDH1-211ENST00000567320 FBXO21O94952 628 aa5.39□□□□□ -1.55
CDH1-211ENST00000567320 PPP2CBP62714 309 aa5.39□□□□□ -1.55
CDH1-211ENST00000567320 PPP2CAP67775 309 aa5.39□□□□□ -1.55
CDH1-211ENST00000567320 ARID5AQ03989 594 aa5.39□□□□□ -1.55
CDH1-211ENST00000567320 SLC10A6Q3KNW5 377 aa5.39□□□□□ -1.55
CDH1-211ENST00000567320 EMC4Q5J8M3 183 aa5.39□□□□□ -1.55
CDH1-211ENST00000567320 SLC35F1Q5T1Q4 408 aa5.39□□□□□ -1.55
CDH1-211ENST00000567320 CIR1Q86X95 450 aaPredicted RBP5.39□□□□□ -1.55
CDH1-211ENST00000567320 HOMEZQ8IX15 550 aa5.39□□□□□ -1.55
CDH1-211ENST00000567320 IGDCC4Q8TDY8 1250 aa5.39□□□□□ -1.55
CDH1-211ENST00000567320 YTHDC1Q96MU7 727 aaKnown RBP5.39□□□□□ -1.55
CDH1-211ENST00000567320 PHF20Q9BVI0 1012 aa5.39□□□□□ -1.55
CDH1-211ENST00000567320 PPP4R1LQ9P1A2 415 aa5.39□□□□□ -1.55
CDH1-211ENST00000567320 DNAJA1P31689 397 aaKnown RBP5.38□□□□□ -1.55
CDH1-211ENST00000567320 TESK1Q15569 626 aa5.38□□□□□ -1.55
CDH1-211ENST00000567320 ZNF585AQ6P3V2 769 aa5.38□□□□□ -1.55
CDH1-211ENST00000567320 PALM2Q8IXS6 379 aa5.38□□□□□ -1.55
CDH1-211ENST00000567320 RBM12BQ8IXT5 1001 aaKnown RBP5.38□□□□□ -1.55
CDH1-211ENST00000567320 KCNJ15Q99712 375 aa5.38□□□□□ -1.55
CDH1-211ENST00000567320 C1QTNF3Q9BXJ4 246 aa5.38□□□□□ -1.55
CDH1-211ENST00000567320 SLC6A20Q9NP91 592 aa5.38□□□□□ -1.55
CDH1-211ENST00000567320 GPR27Q9NS67 375 aa5.38□□□□□ -1.55
CDH1-211ENST00000567320 ASH2LQ9UBL3 628 aa5.38□□□□□ -1.55
CDH1-211ENST00000567320 SRRDQ9UH36 339 aa5.38□□□□□ -1.55
CDH1-211ENST00000567320 A0A1W2PQU0 124 aa5.37□□□□□ -1.55
CDH1-211ENST00000567320 AKAP8O43823 692 aaKnown RBP5.37□□□□□ -1.55
CDH1-211ENST00000567320 MSCO60682 206 aa5.37□□□□□ -1.55
CDH1-211ENST00000567320 GNAT1P11488 350 aa5.37□□□□□ -1.55
CDH1-211ENST00000567320 COL6A2P12110 1019 aa5.37□□□□□ -1.55
CDH1-211ENST00000567320 GLRBP48167 497 aa5.37□□□□□ -1.55
CDH1-211ENST00000567320 MAP4K2Q12851 820 aa5.37□□□□□ -1.55
CDH1-211ENST00000567320 NFATC3Q12968 1075 aa5.37□□□□□ -1.55
CDH1-211ENST00000567320 HSP90AA2PQ14568 343 aaPredicted RBP5.37□□□□□ -1.55
CDH1-211ENST00000567320 ICAM4Q14773 271 aa5.37□□□□□ -1.55
CDH1-211ENST00000567320 SPRED1Q7Z699 444 aa5.37□□□□□ -1.55
CDH1-211ENST00000567320 KLHL36Q8N4N3 616 aa5.37□□□□□ -1.55
CDH1-211ENST00000567320 HNRNPLLQ8WVV9 542 aaKnown RBP5.37□□□□□ -1.55
CDH1-211ENST00000567320 ZCCHC14Q8WYQ9 949 aaKnown RBP5.37□□□□□ -1.55
CDH1-211ENST00000567320 C1orf159Q96HA4 380 aa5.37□□□□□ -1.55
CDH1-211ENST00000567320 CDK5RAP1Q96SZ6 601 aaKnown RBP5.37□□□□□ -1.55
CDH1-211ENST00000567320 KRTAP3-1Q9BYR8 98 aa5.37□□□□□ -1.55
CDH1-211ENST00000567320 KLC2Q9H0B6 622 aa5.37□□□□□ -1.55
CDH1-211ENST00000567320 PPARGC1AQ9UBK2 798 aaKnown RBP5.37□□□□□ -1.55
CDH1-211ENST00000567320 NUB1Q9Y5A7 615 aa5.37□□□□□ -1.55
CDH1-211ENST00000567320 NPFFR2Q9Y5X5 522 aa5.37□□□□□ -1.55
CDH1-211ENST00000567320 C1QTNF3-AMACRE9PGA6 284 aa5.36□□□□□ -1.55
CDH1-211ENST00000567320 PRODHO43272 600 aa5.36□□□□□ -1.55
CDH1-211ENST00000567320 C6P13671 934 aa5.36□□□□□ -1.55
CDH1-211ENST00000567320 SPIRE1Q08AE8 756 aa5.36□□□□□ -1.55
CDH1-211ENST00000567320 CYP4F22Q6NT55 531 aa5.36□□□□□ -1.55
CDH1-211ENST00000567320 SLC16A11Q8NCK7 471 aa5.36□□□□□ -1.55
CDH1-211ENST00000567320 MBD6Q96DN6 1003 aa5.36□□□□□ -1.55
CDH1-211ENST00000567320 PTPN18Q99952 460 aa5.36□□□□□ -1.55
CDH1-211ENST00000567320 SSBP3Q9BWW4 388 aaPredicted RBP5.36□□□□□ -1.55
CDH1-211ENST00000567320 IQCA1LA6NCM1 817 aa5.35□□□□□ -1.55
CDH1-211ENST00000567320 DLX3O60479 287 aa5.35□□□□□ -1.55
CDH1-211ENST00000567320 LTFP02788 710 aa5.35□□□□□ -1.55
CDH1-211ENST00000567320 TCF3P15923 654 aa5.35□□□□□ -1.55
CDH1-211ENST00000567320 GRK2P25098 689 aa5.35□□□□□ -1.55
CDH1-211ENST00000567320 GRK3P35626 688 aa5.35□□□□□ -1.55
CDH1-211ENST00000567320 TUSC3Q13454 348 aa5.35□□□□□ -1.55
CDH1-211ENST00000567320 SLFN13Q68D06 897 aa5.35□□□□□ -1.55
CDH1-211ENST00000567320 ANKS3Q6ZW76 656 aa5.35□□□□□ -1.55
CDH1-211ENST00000567320 RALYLQ86SE5 291 aaKnown RBP5.35□□□□□ -1.55
CDH1-211ENST00000567320 NUDT10Q8NFP7 164 aa5.35□□□□□ -1.55
CDH1-211ENST00000567320 CLEC4DQ8WXI8 215 aa5.35□□□□□ -1.55
CDH1-211ENST00000567320 NUDT11Q96G61 164 aa5.35□□□□□ -1.55
CDH1-211ENST00000567320 DLL4Q9NR61 685 aa5.35□□□□□ -1.55
CDH1-211ENST00000567320 WASF3Q9UPY6 502 aa5.35□□□□□ -1.55
CDH1-211ENST00000567320 TSC22D4Q9Y3Q8 395 aa5.35□□□□□ -1.55
CDH1-211ENST00000567320 TCAF1Q9Y4C2 921 aa5.35□□□□□ -1.55
CDH1-211ENST00000567320 GPR42O15529 346 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 CKMP06732 381 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 FGRP09769 529 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 GDF5P43026 501 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 EPHB4P54760 987 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 SMAD2Q15796 467 aaKnown RBP5.34□□□□□ -1.55
CDH1-211ENST00000567320 DDR2Q16832 855 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 KIZQ2M2Z5 673 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 PAN2Q504Q3 1202 aaKnown RBP5.34□□□□□ -1.55
CDH1-211ENST00000567320 PKN3Q6P5Z2 889 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 KCNT2Q6UVM3 1135 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 OTOP3Q7RTS5 596 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 IFNL2Q8IZJ0 200 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 CELF2-AS1Q8N7Q2 184 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 DCAF4Q8WV16 495 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 AARSD1Q9BTE6 412 aaKnown RBP5.34□□□□□ -1.55
CDH1-211ENST00000567320 CDIP1Q9H305 208 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 ARHGAP20Q9P2F6 1191 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 ZFP69BQ9UJL9 534 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 DSEQ9UL01 958 aa5.34□□□□□ -1.55
CDH1-211ENST00000567320 BLACEA4D250 179 aa5.33□□□□□ -1.56
CDH1-211ENST00000567320 ENO2P09104 434 aaPredicted RBP5.33□□□□□ -1.56
CDH1-211ENST00000567320 FAHP16930 419 aa5.33□□□□□ -1.56
CDH1-211ENST00000567320 TACR2P21452 398 aa5.33□□□□□ -1.56
CDH1-211ENST00000567320 IFRD2Q12894 506 aaPredicted RBP5.33□□□□□ -1.56
CDH1-211ENST00000567320 SKIDA1Q1XH10 827 aa5.33□□□□□ -1.56
CDH1-211ENST00000567320 RSPO2Q6UXX9 243 aaPredicted RBP5.33□□□□□ -1.56
CDH1-211ENST00000567320 NSMFQ6X4W1 530 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms