RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 RRAGDQ9NQL2 400 aaPredicted RBP13.11□□□□□ -0.31
BBS4-213ENST00000567279 PXMP2Q9NR77 195 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 LCTP09848 1927 aa13.11□□□□□ -0.31
BBS4-213ENST00000567279 IPO5O00410 1097 aaKnown RBP13.1□□□□□ -0.31
BBS4-213ENST00000567279 CXCL11O14625 94 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 IDEP14735 1019 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 ITGB5P18084 799 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 UBASH3AP57075 661 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 IRX3P78415 501 aaPredicted RBP13.1□□□□□ -0.31
BBS4-213ENST00000567279 MRPS9P82933 396 aaKnown RBP13.1□□□□□ -0.31
BBS4-213ENST00000567279 PPP2R5CQ13362 524 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 MAP1SQ66K74 1059 aaPredicted RBP13.1□□□□□ -0.31
BBS4-213ENST00000567279 CNNM4Q6P4Q7 775 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 OTOP1Q7RTM1 612 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 NIPA1Q7RTP0 329 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 CCDC186Q7Z3E2 898 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 GPBP1Q86WP2 473 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 PDCD2LQ9BRP1 358 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 WDR11Q9BZH6 1224 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 UNC45AQ9H3U1 944 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.1□□□□□ -0.31
BBS4-213ENST00000567279 UBIAD1Q9Y5Z9 338 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 DDX39AO00148 427 aaKnown RBP13.1□□□□□ -0.31
BBS4-213ENST00000567279 TRAF5O00463 557 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 SPATA31C1P0DKV0 1188 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 BCRP11274 1271 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 FCER1AP12319 257 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 CCDC144BQ3MJ40 725 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 HPS3Q969F9 1004 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 POLR3CQ9BUI4 534 aaPredicted RBP13.1□□□□□ -0.31
BBS4-213ENST00000567279 GTPBP4Q9BZE4 634 aaKnown RBP13.1□□□□□ -0.31
BBS4-213ENST00000567279 RGL1Q9NZL6 768 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 KCNH4Q9UQ05 1017 aa13.1□□□□□ -0.31
BBS4-213ENST00000567279 PVALEFA0A1B0GWK0 134 aa13.09□□□□□ -0.31
BBS4-213ENST00000567279 PSMA7O14818 248 aa13.09□□□□□ -0.31
BBS4-213ENST00000567279 PEX10O60683 326 aa13.09□□□□□ -0.31
BBS4-213ENST00000567279 KRT18P05783 430 aaKnown RBP13.09□□□□□ -0.31
BBS4-213ENST00000567279 CCND2P30279 289 aa13.09□□□□□ -0.31
BBS4-213ENST00000567279 PSMC6P62333 389 aa13.09□□□□□ -0.31
BBS4-213ENST00000567279 STK4Q13043 487 aa13.09□□□□□ -0.31
BBS4-213ENST00000567279 MTMR1Q13613 665 aa13.09□□□□□ -0.31
BBS4-213ENST00000567279 LBX2Q6XYB7 198 aa13.09□□□□□ -0.31
BBS4-213ENST00000567279 TMC6Q7Z403 805 aa13.09□□□□□ -0.31
BBS4-213ENST00000567279 FILIP1Q7Z7B0 1213 aa13.09□□□□□ -0.31
BBS4-213ENST00000567279 DYDC2Q96IM9 177 aa13.09□□□□□ -0.31
BBS4-213ENST00000567279 PAGR1Q9BTK6 254 aa13.09□□□□□ -0.31
BBS4-213ENST00000567279 KCNF1Q9H3M0 494 aa13.09□□□□□ -0.31
BBS4-213ENST00000567279 A1CFQ9NQ94 594 aaKnown RBP13.09□□□□□ -0.31
BBS4-213ENST00000567279 JADE2Q9NQC1 790 aa13.09□□□□□ -0.31
BBS4-213ENST00000567279 KCNH7Q9NS40 1196 aa13.09□□□□□ -0.31
BBS4-213ENST00000567279 BMP2KQ9NSY1 1161 aaPredicted RBP13.09□□□□□ -0.31
BBS4-213ENST00000567279 DNM3Q9UQ16 869 aa13.09□□□□□ -0.31
BBS4-213ENST00000567279 TRIM49BA6NDI0 452 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 HOXA7P31268 230 aaPredicted RBP13.08□□□□□ -0.32
BBS4-213ENST00000567279 PABPC4Q13310 644 aaKnown RBP eCLIP13.08□□□□□ -0.32
BBS4-213ENST00000567279 CTTNQ14247 550 aaKnown RBP13.08□□□□□ -0.32
BBS4-213ENST00000567279 CDKAL1Q5VV42 579 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 MB21D1Q8N884 522 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 KIAA0895Q8NCT3 520 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 DNAJC19Q96DA6 116 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 NAP1L5Q96NT1 182 aaPredicted RBP13.08□□□□□ -0.32
BBS4-213ENST00000567279 RIT2Q99578 217 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 ASCC2Q9H1I8 757 aaPredicted RBP13.08□□□□□ -0.32
BBS4-213ENST00000567279 AGO4Q9HCK5 861 aaKnown RBP13.08□□□□□ -0.32
BBS4-213ENST00000567279 TUFT1Q9NNX1 390 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 SLC39A2Q9NP94 309 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 RTN4Q9NQC3 1192 aaKnown RBP13.08□□□□□ -0.32
BBS4-213ENST00000567279 CYP39A1Q9NYL5 469 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 BTBD7Q9P203 1132 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 AGTPBP1Q9UPW5 1226 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 LOXHD1Q8IVV2 1947 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 NPHP3-ACAD11A0A0J9YXS1 232 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 TESPA1A2RU30 521 aaPredicted RBP13.08□□□□□ -0.32
BBS4-213ENST00000567279 CYP11B2P19099 503 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 PPP1R2P41236 205 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 SLC12A3P55017 1021 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 CACNB1Q02641 598 aaPredicted RBP13.08□□□□□ -0.32
BBS4-213ENST00000567279 RAD51AP2Q09MP3 1159 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 COASYQ13057 564 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 ITGB3BPQ13352 177 aaPredicted RBP13.08□□□□□ -0.32
BBS4-213ENST00000567279 LDLRAD1Q5T700 205 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 TPH2Q8IWU9 490 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 CHST13Q8NET6 341 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 TRIM47Q96LD4 638 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 PANK4Q9NVE7 773 aa13.08□□□□□ -0.32
BBS4-213ENST00000567279 KIAA1217Q5T5P2 1943 aa13.07□□□□□ -0.32
BBS4-213ENST00000567279 NR3C2P08235 984 aa13.07□□□□□ -0.32
BBS4-213ENST00000567279 GJA5P36382 358 aa13.07□□□□□ -0.32
BBS4-213ENST00000567279 HERVK_113P62684 666 aa13.07□□□□□ -0.32
BBS4-213ENST00000567279 EPHA7Q15375 998 aa13.07□□□□□ -0.32
BBS4-213ENST00000567279 XRRA1Q6P2D8 792 aa13.07□□□□□ -0.32
BBS4-213ENST00000567279 MIER3Q7Z3K6 550 aa13.07□□□□□ -0.32
BBS4-213ENST00000567279 CCDC65Q8IXS2 484 aa13.07□□□□□ -0.32
BBS4-213ENST00000567279 SYT2Q8N9I0 419 aaPredicted RBP13.07□□□□□ -0.32
BBS4-213ENST00000567279 NSUN6Q8TEA1 469 aaKnown RBP13.07□□□□□ -0.32
BBS4-213ENST00000567279 DHTKD1Q96HY7 919 aaPredicted RBP13.07□□□□□ -0.32
BBS4-213ENST00000567279 RRAGCQ9HB90 399 aa13.07□□□□□ -0.32
BBS4-213ENST00000567279 SLITRK3O94933 977 aa13.06□□□□□ -0.32
BBS4-213ENST00000567279 EYA4O95677 639 aa13.06□□□□□ -0.32
BBS4-213ENST00000567279 CCNE1P24864 410 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms