RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 MAFGO15525 162 aa22.07■■□□□ 1.12
CCDC113-204ENST00000566498 ATP9AO75110 1047 aa22.07■■□□□ 1.12
CCDC113-204ENST00000566498 F2P00734 622 aa22.07■■□□□ 1.12
CCDC113-204ENST00000566498 HOXD8P13378 290 aaPredicted RBP22.07■■□□□ 1.12
CCDC113-204ENST00000566498 AP3B2Q13367 1082 aa22.07■■□□□ 1.12
CCDC113-204ENST00000566498 ANKRD1Q15327 319 aa22.07■■□□□ 1.12
CCDC113-204ENST00000566498 GDF6Q6KF10 455 aaPredicted RBP22.07■■□□□ 1.12
CCDC113-204ENST00000566498 MXRA8Q9BRK3 442 aa22.07■■□□□ 1.12
CCDC113-204ENST00000566498 SLKQ9H2G2 1235 aaPredicted RBP22.07■■□□□ 1.12
CCDC113-204ENST00000566498 TUT1Q9H6E5 874 aaKnown RBP22.07■■□□□ 1.12
CCDC113-204ENST00000566498 ESYT2A0FGR8 921 aa22.06■■□□□ 1.12
CCDC113-204ENST00000566498 CLK2P49760 499 aaKnown RBP22.06■■□□□ 1.12
CCDC113-204ENST00000566498 UTP14CQ5TAP6 766 aaKnown RBP22.06■■□□□ 1.12
CCDC113-204ENST00000566498 MCTP2Q6DN12 878 aa22.06■■□□□ 1.12
CCDC113-204ENST00000566498 C16orf59Q7L2K0 433 aa22.06■■□□□ 1.12
CCDC113-204ENST00000566498 SESTD1Q86VW0 696 aa22.06■■□□□ 1.12
CCDC113-204ENST00000566498 CYP2W1Q8TAV3 490 aa22.06■■□□□ 1.12
CCDC113-204ENST00000566498 BICD2Q8TD16 824 aa22.06■■□□□ 1.12
CCDC113-204ENST00000566498 GPR20Q99678 358 aa22.06■■□□□ 1.12
CCDC113-204ENST00000566498 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.06■■□□□ 1.12
CCDC113-204ENST00000566498 C16orf70Q9BSU1 422 aa22.06■■□□□ 1.12
CCDC113-204ENST00000566498 IL23AQ9NPF7 189 aa22.06■■□□□ 1.12
CCDC113-204ENST00000566498 VPS54Q9P1Q0 977 aa22.06■■□□□ 1.12
CCDC113-204ENST00000566498 DOCK5Q9H7D0 1870 aa22.06■■□□□ 1.12
CCDC113-204ENST00000566498 HAS3O00219 553 aa22.05■■□□□ 1.12
CCDC113-204ENST00000566498 LGALS2P05162 132 aa22.05■■□□□ 1.12
CCDC113-204ENST00000566498 NLRP5P59047 1200 aa22.05■■□□□ 1.12
CCDC113-204ENST00000566498 BFSP2Q13515 415 aa22.05■■□□□ 1.12
CCDC113-204ENST00000566498 ZNF365Q70YC5 407 aa22.05■■□□□ 1.12
CCDC113-204ENST00000566498 RPUSD2Q8IZ73 545 aaKnown RBP22.05■■□□□ 1.12
CCDC113-204ENST00000566498 REXO1Q8N1G1 1221 aaKnown RBP22.05■■□□□ 1.12
CCDC113-204ENST00000566498 CCDC148Q8NFR7 591 aa22.05■■□□□ 1.12
CCDC113-204ENST00000566498 SCLYQ96I15 445 aa22.05■■□□□ 1.12
CCDC113-204ENST00000566498 KCNH7Q9NS40 1196 aa22.05■■□□□ 1.12
CCDC113-204ENST00000566498 GTF2IRD1Q9UHL9 959 aa22.05■■□□□ 1.12
CCDC113-204ENST00000566498 TPCN1Q9ULQ1 816 aa22.05■■□□□ 1.12
CCDC113-204ENST00000566498 FGBP02675 491 aa22.04■■□□□ 1.12
CCDC113-204ENST00000566498 KCNA2P16389 499 aa22.04■■□□□ 1.12
CCDC113-204ENST00000566498 SREBF1P36956 1147 aa22.04■■□□□ 1.12
CCDC113-204ENST00000566498 NEK4P51957 841 aa22.04■■□□□ 1.12
CCDC113-204ENST00000566498 ARHGAP4P98171 946 aa22.04■■□□□ 1.12
CCDC113-204ENST00000566498 CEP55Q53EZ4 464 aa22.04■■□□□ 1.12
CCDC113-204ENST00000566498 TMEM240Q5SV17 173 aa22.04■■□□□ 1.12
CCDC113-204ENST00000566498 WNT8AQ9H1J5 351 aa22.04■■□□□ 1.12
CCDC113-204ENST00000566498 SH3GLB2Q9NR46 395 aa22.04■■□□□ 1.12
CCDC113-204ENST00000566498 TELO2Q9Y4R8 837 aa22.04■■□□□ 1.12
CCDC113-204ENST00000566498 ADAMTS3O15072 1205 aa22.03■■□□□ 1.12
CCDC113-204ENST00000566498 DEXIO95424 95 aa22.03■■□□□ 1.12
CCDC113-204ENST00000566498 ARP10275 920 aa22.03■■□□□ 1.12
CCDC113-204ENST00000566498 AK2P54819 239 aa22.03■■□□□ 1.12
CCDC113-204ENST00000566498 PSRC1Q6PGN9 363 aaPredicted RBP22.03■■□□□ 1.12
CCDC113-204ENST00000566498 CCDC155Q8N6L0 562 aa22.03■■□□□ 1.12
CCDC113-204ENST00000566498 SEPT1Q8WYJ6 367 aa22.03■■□□□ 1.12
CCDC113-204ENST00000566498 LAMA3Q16787 3333 aa22.02■■□□□ 1.12
CCDC113-204ENST00000566498 PFKFB2O60825 505 aa22.02■■□□□ 1.12
CCDC113-204ENST00000566498 CDKL5O76039 1030 aa22.02■■□□□ 1.12
CCDC113-204ENST00000566498 TCF7P36402 384 aaPredicted RBP22.02■■□□□ 1.12
CCDC113-204ENST00000566498 ZNF200P98182 395 aaPredicted RBP22.02■■□□□ 1.12
CCDC113-204ENST00000566498 SCRN1Q12765 414 aa22.02■■□□□ 1.12
CCDC113-204ENST00000566498 GPR153Q6NV75 609 aa22.02■■□□□ 1.12
CCDC113-204ENST00000566498 DEFB128Q7Z7B8 93 aa22.02■■□□□ 1.12
CCDC113-204ENST00000566498 RASGRP4Q8TDF6 673 aa22.02■■□□□ 1.12
CCDC113-204ENST00000566498 SDF4Q9BRK5 362 aa22.02■■□□□ 1.12
CCDC113-204ENST00000566498 ZNF215Q9UL58 517 aaPredicted RBP22.02■■□□□ 1.12
CCDC113-204ENST00000566498 MEIS1O00470 390 aa22.01■■□□□ 1.11
CCDC113-204ENST00000566498 PITPNM1O00562 1244 aa22.01■■□□□ 1.11
CCDC113-204ENST00000566498 IQCF3P0C7M6 154 aa22.01■■□□□ 1.11
CCDC113-204ENST00000566498 PLA2G4DQ86XP0 818 aa22.01■■□□□ 1.11
CCDC113-204ENST00000566498 DEFB123Q8N688 67 aa22.01■■□□□ 1.11
CCDC113-204ENST00000566498 SZT2Q5T011 3432 aa22.01■■□□□ 1.11
CCDC113-204ENST00000566498 GSTTP1A0A1W2PQM5 241 aa22■■□□□ 1.11
CCDC113-204ENST00000566498 SMIM10L2AP0DMW4 78 aa22■■□□□ 1.11
CCDC113-204ENST00000566498 SMIM10L2BP0DMW5 78 aa22■■□□□ 1.11
CCDC113-204ENST00000566498 OTOP2Q7RTS6 562 aa22■■□□□ 1.11
CCDC113-204ENST00000566498 TRIM50Q86XT4 487 aa22■■□□□ 1.11
CCDC113-204ENST00000566498 CAGE1Q8TC20 777 aa22■■□□□ 1.11
CCDC113-204ENST00000566498 GLG1Q92896 1179 aa22■■□□□ 1.11
CCDC113-204ENST00000566498 ATP6V0A1Q93050 837 aa22■■□□□ 1.11
CCDC113-204ENST00000566498 IL17RAQ96F46 866 aa22■■□□□ 1.11
CCDC113-204ENST00000566498 MTIF3Q9H2K0 278 aaKnown RBP22■■□□□ 1.11
CCDC113-204ENST00000566498 AGO4Q9HCK5 861 aaKnown RBP22■■□□□ 1.11
CCDC113-204ENST00000566498 JPH1Q9HDC5 661 aaPredicted RBP22■■□□□ 1.11
CCDC113-204ENST00000566498 SLC9A2Q9UBY0 812 aa22■■□□□ 1.11
CCDC113-204ENST00000566498 TRIP12Q14669 1992 aaPredicted RBP21.99■■□□□ 1.11
CCDC113-204ENST00000566498 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.99■■□□□ 1.11
CCDC113-204ENST00000566498 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.99■■□□□ 1.11
CCDC113-204ENST00000566498 C17orf102A2RUQ5 167 aa21.99■■□□□ 1.11
CCDC113-204ENST00000566498 CYP3A4P08684 503 aa21.99■■□□□ 1.11
CCDC113-204ENST00000566498 GNAT1P11488 350 aa21.99■■□□□ 1.11
CCDC113-204ENST00000566498 SMAD3P84022 425 aaKnown RBP21.99■■□□□ 1.11
CCDC113-204ENST00000566498 PTK7Q13308 1070 aa21.99■■□□□ 1.11
CCDC113-204ENST00000566498 Q7L0L9 218 aa21.99■■□□□ 1.11
CCDC113-204ENST00000566498 NIPA1Q7RTP0 329 aa21.99■■□□□ 1.11
CCDC113-204ENST00000566498 NECAB1Q8N987 351 aa21.99■■□□□ 1.11
CCDC113-204ENST00000566498 AIFM3Q96NN9 605 aa21.99■■□□□ 1.11
CCDC113-204ENST00000566498 UIMC1Q96RL1 719 aa21.99■■□□□ 1.11
CCDC113-204ENST00000566498 CTAGE1Q96RT6 745 aa21.99■■□□□ 1.11
CCDC113-204ENST00000566498 FTOQ9C0B1 505 aaKnown RBP eCLIP21.99■■□□□ 1.11
CCDC113-204ENST00000566498 RNPEPQ9H4A4 650 aa21.99■■□□□ 1.11
CCDC113-204ENST00000566498 FAM86B1E9PN63 330 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms