RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 ATP6V0A1Q93050 837 aa19.09■□□□□ 0.65
TSR3-202ENST00000566296 CCDC136Q96JN2 1154 aa19.09■□□□□ 0.65
TSR3-202ENST00000566296 ZFP91Q96JP5 570 aaPredicted RBP19.09■□□□□ 0.65
TSR3-202ENST00000566296 TUT1Q9H6E5 874 aaKnown RBP19.09■□□□□ 0.65
TSR3-202ENST00000566296 DOCK5Q9H7D0 1870 aa19.08■□□□□ 0.65
TSR3-202ENST00000566296 LINC01553A4QN01 128 aa19.08■□□□□ 0.64
TSR3-202ENST00000566296 E7EWF7 191 aa19.08■□□□□ 0.64
TSR3-202ENST00000566296 SMIM10L2AP0DMW4 78 aa19.08■□□□□ 0.64
TSR3-202ENST00000566296 SMIM10L2BP0DMW5 78 aa19.08■□□□□ 0.64
TSR3-202ENST00000566296 CHMLP26374 656 aa19.08■□□□□ 0.64
TSR3-202ENST00000566296 PTH1RQ03431 593 aa19.08■□□□□ 0.64
TSR3-202ENST00000566296 TROAPQ12815 778 aa19.08■□□□□ 0.64
TSR3-202ENST00000566296 METTL7BQ6UX53 244 aa19.08■□□□□ 0.64
TSR3-202ENST00000566296 MYOCDQ8IZQ8 938 aa19.08■□□□□ 0.64
TSR3-202ENST00000566296 DBF4BQ8NFT6 615 aa19.08■□□□□ 0.64
TSR3-202ENST00000566296 CUL5Q93034 780 aa19.08■□□□□ 0.64
TSR3-202ENST00000566296 C1QTNF1Q9BXJ1 281 aa19.08■□□□□ 0.64
TSR3-202ENST00000566296 SENP2Q9HC62 589 aa19.08■□□□□ 0.64
TSR3-202ENST00000566296 KAT6AQ92794 2004 aa19.07■□□□□ 0.64
TSR3-202ENST00000566296 FIBPO43427 364 aa19.07■□□□□ 0.64
TSR3-202ENST00000566296 CAND2O75155 1236 aa19.07■□□□□ 0.64
TSR3-202ENST00000566296 GNAT1P11488 350 aa19.07■□□□□ 0.64
TSR3-202ENST00000566296 ICAM3P32942 547 aa19.07■□□□□ 0.64
TSR3-202ENST00000566296 HIC1Q14526 733 aa19.07■□□□□ 0.64
TSR3-202ENST00000566296 CTCFLQ8NI51 663 aaPredicted RBP19.07■□□□□ 0.64
TSR3-202ENST00000566296 SMARCC2Q8TAQ2 1214 aa19.07■□□□□ 0.64
TSR3-202ENST00000566296 PIBF1Q8WXW3 757 aa19.07■□□□□ 0.64
TSR3-202ENST00000566296 SEPT8Q92599 483 aa19.07■□□□□ 0.64
TSR3-202ENST00000566296 INPP4AQ96PE3 977 aaPredicted RBP19.07■□□□□ 0.64
TSR3-202ENST00000566296 USP26Q9BXU7 913 aa19.07■□□□□ 0.64
TSR3-202ENST00000566296 SUGCTQ9HAC7 445 aa19.07■□□□□ 0.64
TSR3-202ENST00000566296 ZNF215Q9UL58 517 aaPredicted RBP19.07■□□□□ 0.64
TSR3-202ENST00000566296 INSL6Q9Y581 213 aa19.07■□□□□ 0.64
TSR3-202ENST00000566296 DDAH1O94760 285 aa19.06■□□□□ 0.64
TSR3-202ENST00000566296 HOXC8P31273 242 aa19.06■□□□□ 0.64
TSR3-202ENST00000566296 KIF5BP33176 963 aa19.06■□□□□ 0.64
TSR3-202ENST00000566296 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.06■□□□□ 0.64
TSR3-202ENST00000566296 RRP36Q96EU6 259 aaKnown RBP19.06■□□□□ 0.64
TSR3-202ENST00000566296 SEC63Q9UGP8 760 aaKnown RBP19.06■□□□□ 0.64
TSR3-202ENST00000566296 SGSM2O43147 1006 aa19.05■□□□□ 0.64
TSR3-202ENST00000566296 TREHO43280 583 aa19.05■□□□□ 0.64
TSR3-202ENST00000566296 CTSHP09668 335 aa19.05■□□□□ 0.64
TSR3-202ENST00000566296 MRPS9P82933 396 aaKnown RBP19.05■□□□□ 0.64
TSR3-202ENST00000566296 PLEKHG4Q58EX7 1191 aa19.05■□□□□ 0.64
TSR3-202ENST00000566296 CASC1Q6TDU7 716 aa19.05■□□□□ 0.64
TSR3-202ENST00000566296 CYFIP1Q7L576 1253 aa19.05■□□□□ 0.64
TSR3-202ENST00000566296 FBXO22Q8NEZ5 403 aa19.05■□□□□ 0.64
TSR3-202ENST00000566296 SPZ1Q9BXG8 430 aa19.05■□□□□ 0.64
TSR3-202ENST00000566296 SPATA31C2B4DYI2 1134 aa19.04■□□□□ 0.64
TSR3-202ENST00000566296 ANTXR2P58335 489 aa19.04■□□□□ 0.64
TSR3-202ENST00000566296 UTP14CQ5TAP6 766 aaKnown RBP19.04■□□□□ 0.64
TSR3-202ENST00000566296 NLRX1Q86UT6 975 aa19.04■□□□□ 0.64
TSR3-202ENST00000566296 MB21D2Q8IYB1 491 aaPredicted RBP19.04■□□□□ 0.64
TSR3-202ENST00000566296 ZNF654Q8IZM8 581 aa19.04■□□□□ 0.64
TSR3-202ENST00000566296 SAMD11Q96NU1 681 aa19.04■□□□□ 0.64
TSR3-202ENST00000566296 YME1L1Q96TA2 773 aa19.04■□□□□ 0.64
TSR3-202ENST00000566296 MAP3K14Q99558 947 aa19.04■□□□□ 0.64
TSR3-202ENST00000566296 GPR20Q99678 358 aa19.04■□□□□ 0.64
TSR3-202ENST00000566296 RNPEPQ9H4A4 650 aa19.04■□□□□ 0.64
TSR3-202ENST00000566296 RTEL1Q9NZ71 1219 aa19.04■□□□□ 0.64
TSR3-202ENST00000566296 TAF6LQ9Y6J9 622 aa19.04■□□□□ 0.64
TSR3-202ENST00000566296 GNAQP50148 359 aa19.03■□□□□ 0.64
TSR3-202ENST00000566296 SP4Q02446 784 aa19.03■□□□□ 0.64
TSR3-202ENST00000566296 SEMA3FQ13275 785 aa19.03■□□□□ 0.64
TSR3-202ENST00000566296 MKRN4PQ13434 485 aaPredicted RBP19.03■□□□□ 0.64
TSR3-202ENST00000566296 PCNX4Q63HM2 1172 aa19.03■□□□□ 0.64
TSR3-202ENST00000566296 XRRA1Q6P2D8 792 aa19.03■□□□□ 0.64
TSR3-202ENST00000566296 CENPQQ7L2Z9 268 aaPredicted RBP19.03■□□□□ 0.64
TSR3-202ENST00000566296 TRIM50Q86XT4 487 aa19.03■□□□□ 0.64
TSR3-202ENST00000566296 LZTS2Q9BRK4 669 aa19.03■□□□□ 0.64
TSR3-202ENST00000566296 C17orf80Q9BSJ5 609 aa19.03■□□□□ 0.64
TSR3-202ENST00000566296 UBE2ZQ9H832 354 aaPredicted RBP19.03■□□□□ 0.64
TSR3-202ENST00000566296 RBM8AQ9Y5S9 174 aaKnown RBP19.03■□□□□ 0.64
TSR3-202ENST00000566296 REV3LO60673 3130 aa19.03■□□□□ 0.64
TSR3-202ENST00000566296 HTRA4P83105 476 aaPredicted RBP19.02■□□□□ 0.64
TSR3-202ENST00000566296 ARHGAP4P98171 946 aa19.02■□□□□ 0.64
TSR3-202ENST00000566296 PTPROQ16827 1216 aa19.02■□□□□ 0.64
TSR3-202ENST00000566296 USP17L6PQ6QN14 398 aa19.02■□□□□ 0.64
TSR3-202ENST00000566296 NFXL1Q6ZNB6 911 aa19.02■□□□□ 0.64
TSR3-202ENST00000566296 GIMAP8Q8ND71 665 aaPredicted RBP19.02■□□□□ 0.64
TSR3-202ENST00000566296 SP7Q8TDD2 431 aaPredicted RBP19.02■□□□□ 0.64
TSR3-202ENST00000566296 IGDCC4Q8TDY8 1250 aa19.02■□□□□ 0.64
TSR3-202ENST00000566296 APBB2Q92870 758 aa19.02■□□□□ 0.64
TSR3-202ENST00000566296 SENP7Q9BQF6 1050 aa19.02■□□□□ 0.64
TSR3-202ENST00000566296 MYL10Q9BUA6 226 aa19.02■□□□□ 0.64
TSR3-202ENST00000566296 BCAS3Q9H6U6 928 aa19.02■□□□□ 0.64
TSR3-202ENST00000566296 LY9Q9HBG7 655 aa19.02■□□□□ 0.64
TSR3-202ENST00000566296 SETD4Q9NVD3 440 aa19.02■□□□□ 0.64
TSR3-202ENST00000566296 RAPGEFL1Q9UHV5 662 aa19.02■□□□□ 0.64
TSR3-202ENST00000566296 XIRP2A4UGR9 3374 aa19.02■□□□□ 0.63
TSR3-202ENST00000566296 NLRC5Q86WI3 1866 aa19.01■□□□□ 0.63
TSR3-202ENST00000566296 PIK3CDO00329 1044 aa19.01■□□□□ 0.63
TSR3-202ENST00000566296 SMARCA1P28370 1054 aa19.01■□□□□ 0.63
TSR3-202ENST00000566296 TIGD5Q53EQ6 642 aa19.01■□□□□ 0.63
TSR3-202ENST00000566296 LMBR1Q8WVP7 490 aa19.01■□□□□ 0.63
TSR3-202ENST00000566296 CDHR1Q96JP9 859 aa19.01■□□□□ 0.63
TSR3-202ENST00000566296 MTA3Q9BTC8 594 aa19.01■□□□□ 0.63
TSR3-202ENST00000566296 COL4A6Q14031 1691 aa19.01■□□□□ 0.63
TSR3-202ENST00000566296 CCDC69A6NI79 296 aa19■□□□□ 0.63
TSR3-202ENST00000566296 PRC1O43663 620 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms