RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 VAV3Q9UKW4 847 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 SPO11Q9Y5K1 396 aa6.66□□□□□ -1.34
CNOT1-209ENST00000566240 A0A1W2PQ45 241 aaPredicted RBP6.65□□□□□ -1.34
CNOT1-209ENST00000566240 A0A1W2PQY0 241 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 PRR19A6NJB7 356 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 KCNK3O14649 394 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 NKRFO15226 690 aaKnown RBP eCLIP6.65□□□□□ -1.34
CNOT1-209ENST00000566240 DGKIO75912 1065 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 ATF3P18847 181 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 SLC9A1P19634 815 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 GNALP38405 381 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 IARSP41252 1262 aaKnown RBP6.65□□□□□ -1.34
CNOT1-209ENST00000566240 IRF9Q00978 393 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 PRKCQQ04759 706 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 FAM102BQ5T8I3 360 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 PTRH1Q86Y79 214 aaKnown RBP6.65□□□□□ -1.34
CNOT1-209ENST00000566240 TTC8Q8TAM2 541 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 PLEKHO2Q8TD55 490 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 JPH3Q8WXH2 748 aaPredicted RBP6.65□□□□□ -1.34
CNOT1-209ENST00000566240 LINC01599Q8WXQ3 324 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 PCGF6Q9BYE7 350 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 RHOBTB2Q9BYZ6 727 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 SLC13A1Q9BZW2 595 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 LUC7LQ9NQ29 371 aaKnown RBP6.65□□□□□ -1.34
CNOT1-209ENST00000566240 C14orf119Q9NWQ9 140 aa6.65□□□□□ -1.34
CNOT1-209ENST00000566240 NOB1Q9ULX3 412 aaKnown RBP6.65□□□□□ -1.34
CNOT1-209ENST00000566240 COA3Q9Y2R0 106 aaPredicted RBP6.65□□□□□ -1.34
CNOT1-209ENST00000566240 LUC7L2Q9Y383 392 aaKnown RBP6.65□□□□□ -1.34
CNOT1-209ENST00000566240 DVL2O14641 736 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 RFPL1O75677 317 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 MT-CO1P00395 513 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 TERF2Q15554 542 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 ANGEL2Q5VTE6 544 aaKnown RBP6.64□□□□□ -1.35
CNOT1-209ENST00000566240 NXNQ6DKJ4 435 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 EP400NLQ6ZTU2 488 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 SLCO6A1Q86UG4 719 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 RASSF3Q86WH2 238 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 TCEAL8Q8IYN2 117 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 KIAA1958Q8N8K9 716 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 PIP4K2CQ8TBX8 421 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 USP33Q8TEY7 942 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 ELF4Q99607 663 aaPredicted RBP6.64□□□□□ -1.35
CNOT1-209ENST00000566240 MTA3Q9BTC8 594 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 EBF1Q9UH73 591 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 IP6K2Q9UHH9 426 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 RWDD3Q9Y3V2 267 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 WASHC2AQ641Q2 1341 aa6.64□□□□□ -1.35
CNOT1-209ENST00000566240 FZD9O00144 591 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 MAN2B1O00754 1011 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 HYAL3O43820 417 aaPredicted RBP6.63□□□□□ -1.35
CNOT1-209ENST00000566240 SNUPNO95149 360 aaKnown RBP6.63□□□□□ -1.35
CNOT1-209ENST00000566240 CFBP00751 764 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 HOXA10P31260 410 aaPredicted RBP6.63□□□□□ -1.35
CNOT1-209ENST00000566240 LSP1P33241 339 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 KIR2DL1P43626 348 aaPredicted RBP6.63□□□□□ -1.35
CNOT1-209ENST00000566240 KIR2DL2P43627 348 aaPredicted RBP6.63□□□□□ -1.35
CNOT1-209ENST00000566240 CORO7P57737 925 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 RTP1P59025 263 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 PHC1P78364 1004 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 SMAD3P84022 425 aaKnown RBP6.63□□□□□ -1.35
CNOT1-209ENST00000566240 DUSP4Q13115 394 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 IKZF1Q13422 519 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 MLC1Q15049 377 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 PCBP2Q15366 365 aaKnown RBP eCLIP6.63□□□□□ -1.35
CNOT1-209ENST00000566240 SMAD2Q15796 467 aaKnown RBP6.63□□□□□ -1.35
CNOT1-209ENST00000566240 MROH9Q5TGP6 573 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 CCSAPQ6IQ19 270 aaPredicted RBP6.63□□□□□ -1.35
CNOT1-209ENST00000566240 PGM2L1Q6PCE3 622 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 RIOX2Q8IUF8 465 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 NOSTRINQ8IVI9 506 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 LZTR1Q8N653 840 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 C1orf162Q8NEQ5 155 aaPredicted RBP6.63□□□□□ -1.35
CNOT1-209ENST00000566240 SH3RF2Q8TEC5 729 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.63□□□□□ -1.35
CNOT1-209ENST00000566240 MISP3Q96FF7 219 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 FAXDC2Q96IV6 333 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 PCIF1Q9H4Z3 704 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 CARS2Q9HA77 564 aaKnown RBP6.63□□□□□ -1.35
CNOT1-209ENST00000566240 SLC6A20Q9NP91 592 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 TOMM22Q9NS69 142 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 LMCD1Q9NZU5 365 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 DSEQ9UL01 958 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 ZNF652Q9Y2D9 606 aa6.63□□□□□ -1.35
CNOT1-209ENST00000566240 NOC2LQ9Y3T9 749 aaKnown RBP6.63□□□□□ -1.35
CNOT1-209ENST00000566240 A0A1W2PQ27 194 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 A0A1W2PQ64 194 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 A0A1W2PQC6 194 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 A0A1W2PQD8 194 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 GOLGA6CA6NDK9 693 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 GOLGA6BA6NDN3 693 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 KRIT1O00522 736 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 SCDO00767 359 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 PRPF3O43395 683 aaKnown RBP6.62□□□□□ -1.35
CNOT1-209ENST00000566240 HIP1RO75146 1068 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 CAND2O75155 1236 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 PEX14O75381 377 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 CT47B1P0C2W7 299 aaPredicted RBP6.62□□□□□ -1.35
CNOT1-209ENST00000566240 GOLGA6DP0CG33 693 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 KIF11P52732 1056 aa6.62□□□□□ -1.35
CNOT1-209ENST00000566240 GPR158Q5T848 1215 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms