RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 TBC1D22BQ9NU19 505 aa16.72■□□□□ 0.27
SPG7-213ENST00000566221 TCEAL9Q9UHQ7 104 aa16.72■□□□□ 0.27
SPG7-213ENST00000566221 SPTLC2O15270 562 aa16.71■□□□□ 0.27
SPG7-213ENST00000566221 GAS7O60861 476 aa16.71■□□□□ 0.27
SPG7-213ENST00000566221 ARIH2O95376 493 aa16.71■□□□□ 0.27
SPG7-213ENST00000566221 AKR1A1P14550 325 aa16.71■□□□□ 0.27
SPG7-213ENST00000566221 ADCYAP1R1P41586 468 aa16.71■□□□□ 0.27
SPG7-213ENST00000566221 TRIM32Q13049 653 aa16.71■□□□□ 0.27
SPG7-213ENST00000566221 ITGB3BPQ13352 177 aaPredicted RBP16.71■□□□□ 0.27
SPG7-213ENST00000566221 NEDD9Q14511 834 aa16.71■□□□□ 0.27
SPG7-213ENST00000566221 TMEM266Q2M3C6 531 aa16.71■□□□□ 0.27
SPG7-213ENST00000566221 PRAMEF19Q5SWL8 479 aa16.71■□□□□ 0.27
SPG7-213ENST00000566221 LRCH2Q5VUJ6 765 aa16.71■□□□□ 0.27
SPG7-213ENST00000566221 TRPV1Q8NER1 839 aa16.71■□□□□ 0.27
SPG7-213ENST00000566221 CHAMP1Q96JM3 812 aa16.71■□□□□ 0.27
SPG7-213ENST00000566221 GBP4Q96PP9 640 aa16.71■□□□□ 0.27
SPG7-213ENST00000566221 TEKT3Q9BXF9 490 aa16.71■□□□□ 0.27
SPG7-213ENST00000566221 PKD2L1Q9P0L9 805 aa16.71■□□□□ 0.27
SPG7-213ENST00000566221 DDX41Q9UJV9 622 aaKnown RBP16.71■□□□□ 0.27
SPG7-213ENST00000566221 FAM184BQ9ULE4 1060 aa16.71■□□□□ 0.27
SPG7-213ENST00000566221 CENPFP49454 3210 aa16.7■□□□□ 0.26
SPG7-213ENST00000566221 PPP6R2O75170 966 aa16.7■□□□□ 0.26
SPG7-213ENST00000566221 PSMD10O75832 226 aa16.7■□□□□ 0.26
SPG7-213ENST00000566221 TXKP42681 527 aa16.7■□□□□ 0.26
SPG7-213ENST00000566221 TNFAIP2Q03169 654 aa16.7■□□□□ 0.26
SPG7-213ENST00000566221 LY6KQ17RY6 165 aa16.7■□□□□ 0.26
SPG7-213ENST00000566221 CSPP1Q1MSJ5 1256 aa16.7■□□□□ 0.26
SPG7-213ENST00000566221 DUSP28Q4G0W2 176 aa16.7■□□□□ 0.26
SPG7-213ENST00000566221 HABP4Q5JVS0 413 aaKnown RBP16.7■□□□□ 0.26
SPG7-213ENST00000566221 LEO1Q8WVC0 666 aaPredicted RBP16.7■□□□□ 0.26
SPG7-213ENST00000566221 FERMT2Q96AC1 680 aa16.7■□□□□ 0.26
SPG7-213ENST00000566221 RAB34Q9BZG1 259 aa16.7■□□□□ 0.26
SPG7-213ENST00000566221 RCOR1Q9UKL0 485 aa16.7■□□□□ 0.26
SPG7-213ENST00000566221 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.69■□□□□ 0.26
SPG7-213ENST00000566221 DHX15O43143 795 aaKnown RBP16.69■□□□□ 0.26
SPG7-213ENST00000566221 SEPT4O43236 478 aa16.69■□□□□ 0.26
SPG7-213ENST00000566221 ATP9AO75110 1047 aa16.69■□□□□ 0.26
SPG7-213ENST00000566221 GGPS1O95749 300 aa16.69■□□□□ 0.26
SPG7-213ENST00000566221 GH1P01241 217 aa16.69■□□□□ 0.26
SPG7-213ENST00000566221 SMPD1P17405 629 aa16.69■□□□□ 0.26
SPG7-213ENST00000566221 CNGA1P29973 690 aa16.69■□□□□ 0.26
SPG7-213ENST00000566221 FXR2P51116 673 aaKnown RBP eCLIP16.69■□□□□ 0.26
SPG7-213ENST00000566221 KRT76Q01546 638 aa16.69■□□□□ 0.26
SPG7-213ENST00000566221 SP2Q02086 613 aa16.69■□□□□ 0.26
SPG7-213ENST00000566221 CELF3Q5SZQ8 465 aaKnown RBP16.69■□□□□ 0.26
SPG7-213ENST00000566221 METTL7BQ6UX53 244 aa16.69■□□□□ 0.26
SPG7-213ENST00000566221 DTHD1Q6ZMT9 781 aa16.69■□□□□ 0.26
SPG7-213ENST00000566221 SH3TC2Q8TF17 1288 aa16.69■□□□□ 0.26
SPG7-213ENST00000566221 GJA10Q969M2 543 aa16.69■□□□□ 0.26
SPG7-213ENST00000566221 UIMC1Q96RL1 719 aa16.69■□□□□ 0.26
SPG7-213ENST00000566221 TTC12Q9H892 705 aaPredicted RBP16.69■□□□□ 0.26
SPG7-213ENST00000566221 JPH1Q9HDC5 661 aaPredicted RBP16.69■□□□□ 0.26
SPG7-213ENST00000566221 VAV3Q9UKW4 847 aa16.69■□□□□ 0.26
SPG7-213ENST00000566221 PCDHA12Q9UN75 941 aa16.69■□□□□ 0.26
SPG7-213ENST00000566221 ELP1O95163 1332 aa16.69■□□□□ 0.26
SPG7-213ENST00000566221 VWA3AA6NCI4 1184 aa16.68■□□□□ 0.26
SPG7-213ENST00000566221 FARP2O94887 1054 aaPredicted RBP16.68■□□□□ 0.26
SPG7-213ENST00000566221 MARCKSP29966 332 aaPredicted RBP16.68■□□□□ 0.26
SPG7-213ENST00000566221 CCND3P30281 292 aaPredicted RBP16.68■□□□□ 0.26
SPG7-213ENST00000566221 PPP2R5CQ13362 524 aa16.68■□□□□ 0.26
SPG7-213ENST00000566221 CYFIP1Q7L576 1253 aa16.68■□□□□ 0.26
SPG7-213ENST00000566221 DHX37Q8IY37 1157 aaKnown RBP16.68■□□□□ 0.26
SPG7-213ENST00000566221 KRI1Q8N9T8 703 aaKnown RBP16.68■□□□□ 0.26
SPG7-213ENST00000566221 EMID1Q96A84 441 aaPredicted RBP16.68■□□□□ 0.26
SPG7-213ENST00000566221 MLXIPQ9HAP2 919 aa16.68■□□□□ 0.26
SPG7-213ENST00000566221 HMX1Q9NP08 348 aaPredicted RBP16.68■□□□□ 0.26
SPG7-213ENST00000566221 SLC9A2Q9UBY0 812 aa16.68■□□□□ 0.26
SPG7-213ENST00000566221 FBXO2Q9UK22 296 aaPredicted RBP16.68■□□□□ 0.26
SPG7-213ENST00000566221 SRPRBQ9Y5M8 271 aaKnown RBP16.68■□□□□ 0.26
SPG7-213ENST00000566221 DDX39AO00148 427 aaKnown RBP16.67■□□□□ 0.26
SPG7-213ENST00000566221 ADCY6O43306 1168 aa16.67■□□□□ 0.26
SPG7-213ENST00000566221 MSCO60682 206 aa16.67■□□□□ 0.26
SPG7-213ENST00000566221 DUSP11O75319 330 aaKnown RBP16.67■□□□□ 0.26
SPG7-213ENST00000566221 PTMSP20962 102 aa16.67■□□□□ 0.26
SPG7-213ENST00000566221 ME1P48163 572 aa16.67■□□□□ 0.26
SPG7-213ENST00000566221 ARHGAP1Q07960 439 aa16.67■□□□□ 0.26
SPG7-213ENST00000566221 SPIRE1Q08AE8 756 aa16.67■□□□□ 0.26
SPG7-213ENST00000566221 LAMC2Q13753 1193 aa16.67■□□□□ 0.26
SPG7-213ENST00000566221 ZNF746Q6NUN9 644 aaPredicted RBP16.67■□□□□ 0.26
SPG7-213ENST00000566221 TLK2Q86UE8 772 aa16.67■□□□□ 0.26
SPG7-213ENST00000566221 COPS5Q92905 334 aa16.67■□□□□ 0.26
SPG7-213ENST00000566221 GDPD2Q9HCC8 539 aa16.67■□□□□ 0.26
SPG7-213ENST00000566221 GNEQ9Y223 722 aaKnown RBP16.67■□□□□ 0.26
SPG7-213ENST00000566221 Q9Y3F1 56 aa16.67■□□□□ 0.26
SPG7-213ENST00000566221 ARID2Q68CP9 1835 aa16.67■□□□□ 0.26
SPG7-213ENST00000566221 WDR64B1ANS9 1081 aa16.66■□□□□ 0.26
SPG7-213ENST00000566221 CUTAO60888 179 aa16.66■□□□□ 0.26
SPG7-213ENST00000566221 RARBP10826 455 aa16.66■□□□□ 0.26
SPG7-213ENST00000566221 SFNP31947 248 aa16.66■□□□□ 0.26
SPG7-213ENST00000566221 LONP1P36776 959 aaKnown RBP16.66■□□□□ 0.26
SPG7-213ENST00000566221 TECP42680 631 aa16.66■□□□□ 0.26
SPG7-213ENST00000566221 JAK3P52333 1124 aa16.66■□□□□ 0.26
SPG7-213ENST00000566221 PDIA5Q14554 519 aa16.66■□□□□ 0.26
SPG7-213ENST00000566221 TMEM63BQ5T3F8 832 aa16.66■□□□□ 0.26
SPG7-213ENST00000566221 GJC2Q5T442 439 aaPredicted RBP16.66■□□□□ 0.26
SPG7-213ENST00000566221 B3GNT9Q6UX72 402 aa16.66■□□□□ 0.26
SPG7-213ENST00000566221 SMAP1Q8IYB5 467 aaPredicted RBP16.66■□□□□ 0.26
SPG7-213ENST00000566221 IGSF22Q8N9C0 903 aa16.66■□□□□ 0.26
SPG7-213ENST00000566221 RDM1Q8NG50 284 aa16.66■□□□□ 0.26
SPG7-213ENST00000566221 OR6J1Q8NGC5 347 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms