RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 SMIM10L2AP0DMW4 78 aa21.75■■□□□ 1.07
ABCA3-204ENST00000566200 SMIM10L2BP0DMW5 78 aa21.75■■□□□ 1.07
ABCA3-204ENST00000566200 IKBKEQ14164 716 aa21.75■■□□□ 1.07
ABCA3-204ENST00000566200 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.75■■□□□ 1.07
ABCA3-204ENST00000566200 ZNF654Q8IZM8 581 aa21.75■■□□□ 1.07
ABCA3-204ENST00000566200 ZBED2Q9BTP6 218 aa21.75■■□□□ 1.07
ABCA3-204ENST00000566200 SPZ1Q9BXG8 430 aa21.75■■□□□ 1.07
ABCA3-204ENST00000566200 TUT1Q9H6E5 874 aaKnown RBP21.75■■□□□ 1.07
ABCA3-204ENST00000566200 RTEL1Q9NZ71 1219 aa21.75■■□□□ 1.07
ABCA3-204ENST00000566200 TREHO43280 583 aa21.74■■□□□ 1.07
ABCA3-204ENST00000566200 THPOP40225 353 aa21.74■■□□□ 1.07
ABCA3-204ENST00000566200 USP17L6PQ6QN14 398 aa21.74■■□□□ 1.07
ABCA3-204ENST00000566200 DBF4BQ8NFT6 615 aa21.74■■□□□ 1.07
ABCA3-204ENST00000566200 GDPD5Q8WTR4 605 aa21.74■■□□□ 1.07
ABCA3-204ENST00000566200 MAP3K14Q99558 947 aa21.74■■□□□ 1.07
ABCA3-204ENST00000566200 RAD9AQ99638 391 aa21.74■■□□□ 1.07
ABCA3-204ENST00000566200 GPR20Q99678 358 aa21.74■■□□□ 1.07
ABCA3-204ENST00000566200 RNPEPQ9H4A4 650 aa21.74■■□□□ 1.07
ABCA3-204ENST00000566200 C17orf102A2RUQ5 167 aa21.73■■□□□ 1.07
ABCA3-204ENST00000566200 LINC01553A4QN01 128 aa21.73■■□□□ 1.07
ABCA3-204ENST00000566200 RSPH10B2B2RC85 870 aa21.73■■□□□ 1.07
ABCA3-204ENST00000566200 MEIS2O14770 477 aa21.73■■□□□ 1.07
ABCA3-204ENST00000566200 STAM2O75886 525 aa21.73■■□□□ 1.07
ABCA3-204ENST00000566200 DDAH1O94760 285 aa21.73■■□□□ 1.07
ABCA3-204ENST00000566200 RSPH10BP0C881 870 aa21.73■■□□□ 1.07
ABCA3-204ENST00000566200 GNPTABQ3T906 1256 aa21.73■■□□□ 1.07
ABCA3-204ENST00000566200 FAM117BQ6P1L5 589 aa21.73■■□□□ 1.07
ABCA3-204ENST00000566200 METTL7BQ6UX53 244 aa21.73■■□□□ 1.07
ABCA3-204ENST00000566200 CYFIP1Q7L576 1253 aa21.73■■□□□ 1.07
ABCA3-204ENST00000566200 TRIM50Q86XT4 487 aa21.73■■□□□ 1.07
ABCA3-204ENST00000566200 ATP6V0A1Q93050 837 aa21.73■■□□□ 1.07
ABCA3-204ENST00000566200 SUGCTQ9HAC7 445 aa21.73■■□□□ 1.07
ABCA3-204ENST00000566200 PIK3CDO00329 1044 aa21.72■■□□□ 1.07
ABCA3-204ENST00000566200 FIBPO43427 364 aa21.72■■□□□ 1.07
ABCA3-204ENST00000566200 EFCAB14O75071 495 aa21.72■■□□□ 1.07
ABCA3-204ENST00000566200 PLEKHA8P1O95397 391 aa21.72■■□□□ 1.07
ABCA3-204ENST00000566200 ERVK-21P61565 698 aa21.72■■□□□ 1.07
ABCA3-204ENST00000566200 NEDD9Q14511 834 aa21.72■■□□□ 1.07
ABCA3-204ENST00000566200 PLEKHG4Q58EX7 1191 aa21.72■■□□□ 1.07
ABCA3-204ENST00000566200 IL27Q8NEV9 243 aa21.72■■□□□ 1.07
ABCA3-204ENST00000566200 MTUS1Q9ULD2 1270 aa21.72■■□□□ 1.07
ABCA3-204ENST00000566200 EMSYQ7Z589 1322 aa21.72■■□□□ 1.07
ABCA3-204ENST00000566200 NOP56O00567 594 aaKnown RBP21.71■■□□□ 1.07
ABCA3-204ENST00000566200 PRC1O43663 620 aa21.71■■□□□ 1.07
ABCA3-204ENST00000566200 SMARCA1P28370 1054 aa21.71■■□□□ 1.07
ABCA3-204ENST00000566200 AAK1Q2M2I8 961 aa21.71■■□□□ 1.07
ABCA3-204ENST00000566200 PCNX4Q63HM2 1172 aa21.71■■□□□ 1.07
ABCA3-204ENST00000566200 SRBD1Q8N5C6 995 aaKnown RBP21.71■■□□□ 1.07
ABCA3-204ENST00000566200 CTCFLQ8NI51 663 aaPredicted RBP21.71■■□□□ 1.07
ABCA3-204ENST00000566200 RRP36Q96EU6 259 aaKnown RBP21.71■■□□□ 1.07
ABCA3-204ENST00000566200 USP26Q9BXU7 913 aa21.71■■□□□ 1.07
ABCA3-204ENST00000566200 LSG1Q9H089 658 aaKnown RBP21.71■■□□□ 1.07
ABCA3-204ENST00000566200 SETD4Q9NVD3 440 aa21.71■■□□□ 1.07
ABCA3-204ENST00000566200 COG5Q9UP83 839 aa21.71■■□□□ 1.07
ABCA3-204ENST00000566200 SH2B2O14492 632 aaPredicted RBP21.7■■□□□ 1.06
ABCA3-204ENST00000566200 ADAM17P78536 824 aa21.7■■□□□ 1.06
ABCA3-204ENST00000566200 CMTR1Q8N1G2 835 aaKnown RBP21.7■■□□□ 1.06
ABCA3-204ENST00000566200 SMARCC2Q8TAQ2 1214 aa21.7■■□□□ 1.06
ABCA3-204ENST00000566200 TGS1Q96RS0 853 aaKnown RBP21.7■■□□□ 1.06
ABCA3-204ENST00000566200 MTA3Q9BTC8 594 aa21.7■■□□□ 1.06
ABCA3-204ENST00000566200 BDP1A6H8Y1 2624 aa21.7■■□□□ 1.06
ABCA3-204ENST00000566200 RXRAP19793 462 aa21.69■■□□□ 1.06
ABCA3-204ENST00000566200 KIF5BP33176 963 aa21.69■■□□□ 1.06
ABCA3-204ENST00000566200 HTRA4P83105 476 aaPredicted RBP21.69■■□□□ 1.06
ABCA3-204ENST00000566200 LMCD1Q9NZU5 365 aa21.69■■□□□ 1.06
ABCA3-204ENST00000566200 SLC27A2O14975 620 aa21.68■■□□□ 1.06
ABCA3-204ENST00000566200 CTSHP09668 335 aa21.68■■□□□ 1.06
ABCA3-204ENST00000566200 SP4Q02446 784 aa21.68■■□□□ 1.06
ABCA3-204ENST00000566200 UTP14CQ5TAP6 766 aaKnown RBP21.68■■□□□ 1.06
ABCA3-204ENST00000566200 XRRA1Q6P2D8 792 aa21.68■■□□□ 1.06
ABCA3-204ENST00000566200 CASC1Q6TDU7 716 aa21.68■■□□□ 1.06
ABCA3-204ENST00000566200 MYOCDQ8IZQ8 938 aa21.68■■□□□ 1.06
ABCA3-204ENST00000566200 SP7Q8TDD2 431 aaPredicted RBP21.68■■□□□ 1.06
ABCA3-204ENST00000566200 LMBR1Q8WVP7 490 aa21.68■■□□□ 1.06
ABCA3-204ENST00000566200 HLA-CQ95604 372 aa21.68■■□□□ 1.06
ABCA3-204ENST00000566200 SENP7Q9BQF6 1050 aa21.68■■□□□ 1.06
ABCA3-204ENST00000566200 C17orf80Q9BSJ5 609 aa21.68■■□□□ 1.06
ABCA3-204ENST00000566200 NCOR1O75376 2440 aa21.68■■□□□ 1.06
ABCA3-204ENST00000566200 hCG_1642624A0A1W2PR95 340 aa21.67■■□□□ 1.06
ABCA3-204ENST00000566200 ATP9AO75110 1047 aa21.67■■□□□ 1.06
ABCA3-204ENST00000566200 CAND2O75155 1236 aa21.67■■□□□ 1.06
ABCA3-204ENST00000566200 AMHP03971 560 aa21.67■■□□□ 1.06
ABCA3-204ENST00000566200 COL9A1P20849 921 aa21.67■■□□□ 1.06
ABCA3-204ENST00000566200 MCM5P33992 734 aa21.67■■□□□ 1.06
ABCA3-204ENST00000566200 RAB11FIP4Q86YS3 637 aa21.67■■□□□ 1.06
ABCA3-204ENST00000566200 CUL5Q93034 780 aa21.67■■□□□ 1.06
ABCA3-204ENST00000566200 TMEM87BQ96K49 555 aa21.67■■□□□ 1.06
ABCA3-204ENST00000566200 LZTS2Q9BRK4 669 aa21.67■■□□□ 1.06
ABCA3-204ENST00000566200 SEC63Q9UGP8 760 aaKnown RBP21.67■■□□□ 1.06
ABCA3-204ENST00000566200 RAPGEFL1Q9UHV5 662 aa21.67■■□□□ 1.06
ABCA3-204ENST00000566200 INSL6Q9Y581 213 aa21.67■■□□□ 1.06
ABCA3-204ENST00000566200 COL4A6Q14031 1691 aa21.66■■□□□ 1.06
ABCA3-204ENST00000566200 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.66■■□□□ 1.06
ABCA3-204ENST00000566200 KCNA2P16389 499 aa21.66■■□□□ 1.06
ABCA3-204ENST00000566200 ITGB5P18084 799 aa21.66■■□□□ 1.06
ABCA3-204ENST00000566200 LIFRP42702 1097 aa21.66■■□□□ 1.06
ABCA3-204ENST00000566200 NECTIN1Q15223 517 aa21.66■■□□□ 1.06
ABCA3-204ENST00000566200 FAM26DQ5JW98 314 aa21.66■■□□□ 1.06
ABCA3-204ENST00000566200 ESYT1Q9BSJ8 1104 aa21.66■■□□□ 1.06
ABCA3-204ENST00000566200 ZNF215Q9UL58 517 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms