RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 KRT32Q14532 448 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 RTN1Q16799 776 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 XRRA1Q6P2D8 792 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 TRAF7Q6Q0C0 670 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 TRIM50Q86XT4 487 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 KCNB2Q92953 911 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 GPR20Q99678 358 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 SENP7Q9BQF6 1050 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 FTOQ9C0B1 505 aaKnown RBP eCLIP11.53□□□□□ -0.56
CMTM3-209ENST00000565003 PRDM12Q9H4Q4 367 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 TUT1Q9H6E5 874 aaKnown RBP11.53□□□□□ -0.56
CMTM3-209ENST00000565003 EYSQ5T1H1 3165 aa11.53□□□□□ -0.56
CMTM3-209ENST00000565003 GOLGA8AA7E2F4 631 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 GOLGA8BA8MQT2 603 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 DLL1O00548 723 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 ATP9AO75110 1047 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 SMIM10L2AP0DMW4 78 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 SMIM10L2BP0DMW5 78 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 ACTN1P12814 892 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 HOXC8P31273 242 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 SP4Q02446 784 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 TCTN1Q2MV58 587 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 ZNF618Q5T7W0 954 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 NLRX1Q86UT6 975 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 SERINC5Q86VE9 423 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 USP38Q8NB14 1042 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 GPRASP2Q96D09 838 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 USP26Q9BXU7 913 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 SLC28A3Q9HAS3 691 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 PCDHA6Q9UN73 950 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 PCDHA8Q9Y5H6 950 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 PCDHA11Q9Y5I1 949 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 SNX14Q9Y5W7 946 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 MYO9BQ13459 2157 aa11.52□□□□□ -0.57
CMTM3-209ENST00000565003 UNC80Q8N2C7 3258 aa11.51□□□□□ -0.57
CMTM3-209ENST00000565003 PTPRSQ13332 1948 aa11.51□□□□□ -0.57
CMTM3-209ENST00000565003 SPDYE3A6NKU9 549 aa11.51□□□□□ -0.57
CMTM3-209ENST00000565003 BAIAP3O94812 1187 aa11.51□□□□□ -0.57
CMTM3-209ENST00000565003 CXCL10P02778 98 aa11.51□□□□□ -0.57
CMTM3-209ENST00000565003 HMGB1P09429 215 aaKnown RBP11.51□□□□□ -0.57
CMTM3-209ENST00000565003 KCNA2P16389 499 aa11.51□□□□□ -0.57
CMTM3-209ENST00000565003 NAPAP54920 295 aa11.51□□□□□ -0.57
CMTM3-209ENST00000565003 APOBRQ0VD83 1088 aa11.51□□□□□ -0.57
CMTM3-209ENST00000565003 ADGRE1Q14246 886 aa11.51□□□□□ -0.57
CMTM3-209ENST00000565003 MBTPS1Q14703 1052 aa11.51□□□□□ -0.57
CMTM3-209ENST00000565003 PPP2R2DQ66LE6 453 aa11.51□□□□□ -0.57
CMTM3-209ENST00000565003 PGBD1Q96JS3 809 aa11.51□□□□□ -0.57
CMTM3-209ENST00000565003 JAKMIP1Q96N16 626 aaKnown RBP11.51□□□□□ -0.57
CMTM3-209ENST00000565003 SLC9A7Q96T83 725 aa11.51□□□□□ -0.57
CMTM3-209ENST00000565003 RNPEPQ9H4A4 650 aa11.51□□□□□ -0.57
CMTM3-209ENST00000565003 RIC8AQ9NPQ8 531 aa11.51□□□□□ -0.57
CMTM3-209ENST00000565003 UBIAD1Q9Y5Z9 338 aa11.51□□□□□ -0.57
CMTM3-209ENST00000565003 V9GY48 417 aaPredicted RBP11.51□□□□□ -0.57
CMTM3-209ENST00000565003 C17orf102A2RUQ5 167 aa11.5□□□□□ -0.57
CMTM3-209ENST00000565003 STXBP3O00186 592 aa11.5□□□□□ -0.57
CMTM3-209ENST00000565003 TREHO43280 583 aa11.5□□□□□ -0.57
CMTM3-209ENST00000565003 ARHGEF15O94989 841 aa11.5□□□□□ -0.57
CMTM3-209ENST00000565003 PARNO95453 639 aaKnown RBP11.5□□□□□ -0.57
CMTM3-209ENST00000565003 CA3P07451 260 aa11.5□□□□□ -0.57
CMTM3-209ENST00000565003 TCF7P36402 384 aaPredicted RBP11.5□□□□□ -0.57
CMTM3-209ENST00000565003 RCAN1P53805 252 aa11.5□□□□□ -0.57
CMTM3-209ENST00000565003 WDR5P61964 334 aaKnown RBP11.5□□□□□ -0.57
CMTM3-209ENST00000565003 MTMR1Q13613 665 aa11.5□□□□□ -0.57
CMTM3-209ENST00000565003 UTP14CQ5TAP6 766 aaKnown RBP11.5□□□□□ -0.57
CMTM3-209ENST00000565003 PPP1R18Q6NYC8 613 aa11.5□□□□□ -0.57
CMTM3-209ENST00000565003 Q6ZUG5 572 aa11.5□□□□□ -0.57
CMTM3-209ENST00000565003 TMCO2Q7Z6W1 182 aaPredicted RBP11.5□□□□□ -0.57
CMTM3-209ENST00000565003 HERC6Q8IVU3 1022 aa11.5□□□□□ -0.57
CMTM3-209ENST00000565003 BRF1Q92994 677 aa11.5□□□□□ -0.57
CMTM3-209ENST00000565003 ATP6V0A1Q93050 837 aa11.5□□□□□ -0.57
CMTM3-209ENST00000565003 GAS2L1Q99501 681 aaPredicted RBP11.5□□□□□ -0.57
CMTM3-209ENST00000565003 SETD4Q9NVD3 440 aa11.5□□□□□ -0.57
CMTM3-209ENST00000565003 BARHL2Q9NY43 387 aa11.5□□□□□ -0.57
CMTM3-209ENST00000565003 PKD2L1Q9P0L9 805 aa11.5□□□□□ -0.57
CMTM3-209ENST00000565003 NAP1L2Q9ULW6 460 aaPredicted RBP11.5□□□□□ -0.57
CMTM3-209ENST00000565003 CHD9Q3L8U1 2897 aa11.5□□□□□ -0.57
CMTM3-209ENST00000565003 hCG_1984214I3L0E3 225 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 REC8O95072 547 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 RPS6KB1P23443 525 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 ADD1P35611 737 aaKnown RBP11.49□□□□□ -0.57
CMTM3-209ENST00000565003 THPOP40225 353 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 METAP2P50579 478 aaKnown RBP eCLIP11.49□□□□□ -0.57
CMTM3-209ENST00000565003 ADCY7P51828 1080 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 ADAM17P78536 824 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 DEFB103AP81534 67 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 FGD1P98174 961 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 CNKSR3Q6P9H4 555 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 BLOC1S2Q6QNY1 142 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 ZNF713Q8N859 430 aaPredicted RBP11.49□□□□□ -0.57
CMTM3-209ENST00000565003 GIMAP8Q8ND71 665 aaPredicted RBP11.49□□□□□ -0.57
CMTM3-209ENST00000565003 CYP2W1Q8TAV3 490 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 PHOSPHO2Q8TCD6 241 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 LMBR1Q8WVP7 490 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 CDHR1Q96JP9 859 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 JADE2Q9NQC1 790 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 TMEM260Q9NX78 707 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 ZNF215Q9UL58 517 aaPredicted RBP11.49□□□□□ -0.57
CMTM3-209ENST00000565003 NID2Q14112 1375 aa11.49□□□□□ -0.57
CMTM3-209ENST00000565003 CUL9Q8IWT3 2517 aa11.48□□□□□ -0.57
CMTM3-209ENST00000565003 GSTTP1A0A1W2PQM5 241 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms