RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 LARP4BQ92615 738 aaKnown RBP22.5■■□□□ 1.19
MAP1LC3B-206ENST00000564844 CELF1Q92879 486 aaKnown RBP22.5■■□□□ 1.19
MAP1LC3B-206ENST00000564844 SEC16BQ96JE7 1060 aa22.5■■□□□ 1.19
MAP1LC3B-206ENST00000564844 INPP4AQ96PE3 977 aaPredicted RBP22.5■■□□□ 1.19
MAP1LC3B-206ENST00000564844 M0R2N6 131 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 SART1O43290 800 aaKnown RBP22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 MARCH6O60337 910 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 EPS15P42566 896 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 DIXDC1Q155Q3 683 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 NBPF9Q3BBW0 867 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 FAM228AQ86W67 206 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 SNX29Q8TEQ0 813 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 RAPGEF5Q92565 580 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 COA7Q96BR5 231 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 HMGB1P1B2RPK0 211 aaPredicted RBP22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 CDC25CP30307 473 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 MKRN4PQ13434 485 aaPredicted RBP22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 BARHL2Q9NY43 387 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 CEP83Q9Y592 693 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 SLC37A4O43826 429 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 SMTNP53814 917 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 EIF6P56537 245 aaKnown RBP22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 TNNC1P63316 161 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 IFFO1Q0D2I5 559 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 PARP9Q8IXQ6 854 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 TPX2Q9ULW0 747 aaKnown RBP22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 ATP8A1Q9Y2Q0 1164 aa22.49■■□□□ 1.19
MAP1LC3B-206ENST00000564844 NAB2Q15742 525 aa22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 GLE1Q53GS7 698 aaKnown RBP22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 MEI1Q5TIA1 1274 aa22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 LRRC55Q6ZSA7 311 aa22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 NEK8Q86SG6 692 aa22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 TXNRD3Q86VQ6 643 aa22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 FUKQ8N0W3 1084 aa22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 PIGSQ96S52 555 aa22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 SLC24A3Q9HC58 644 aa22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 TTI1O43156 1089 aa22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 PJA2O43164 708 aa22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 RASSF9O75901 435 aa22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 ADAMTS2O95450 1211 aa22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 SNCBQ16143 134 aa22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 ERFEQ4G0M1 354 aa22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 ZNF444Q8N0Y2 327 aaPredicted RBP22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 PNMA5Q96PV4 448 aa22.48■■□□□ 1.19
MAP1LC3B-206ENST00000564844 EIF4E1BA6NMX2 242 aaKnown RBP22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 ELF1P32519 619 aa22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 DHX9Q08211 1270 aaKnown RBP22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 NEDD9Q14511 834 aa22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 ECM1Q16610 540 aa22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 WHAMMQ8TF30 809 aa22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 SELENOSQ9BQE4 189 aa22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 TMEM47Q9BQJ4 181 aa22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 TRIM51Q9BSJ1 452 aa22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 FRMPD2Q68DX3 1309 aaPredicted RBP22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 KRIT1O00522 736 aa22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 ORC4O43929 436 aa22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 LCA5LO95447 670 aa22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 CRKLP46109 303 aaKnown RBP22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 PSEN1P49768 467 aa22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 SOGA3Q5TF21 947 aa22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 PNMA8AQ86V59 439 aaPredicted RBP22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 MAPKAPK5Q8IW41 473 aa22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 TCP11Q8WWU5 503 aa22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 TNS2Q63HR2 1409 aa22.47■■□□□ 1.19
MAP1LC3B-206ENST00000564844 PPP1R7Q15435 360 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 CALCRLQ16602 461 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 HIBCHQ6NVY1 386 aaPredicted RBP22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 TGFBRAP1Q8WUH2 860 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 CCDC113Q9H0I3 377 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 ATP6V0A2Q9Y487 856 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 TIAM2Q8IVF5 1701 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 SERPING1P05155 500 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 MYL1P05976 194 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 PTK2Q05397 1052 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 LLGL1Q15334 1064 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 DZIP1Q86YF9 867 aaKnown RBP22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 CACNA2D3Q8IZS8 1091 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 COL18A1P39060 1754 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 DUOX1Q9NRD9 1551 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 SLC9A1P19634 815 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 ECHS1P30084 290 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 RNF10Q8N5U6 811 aaKnown RBP22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 ANKS1AQ92625 1134 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 TSG101Q99816 390 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 PNMA2Q9UL42 364 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 MINPP1Q9UNW1 487 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 NR2E1Q9Y466 385 aa22.46■■□□□ 1.19
MAP1LC3B-206ENST00000564844 CLTAP09496 248 aa22.45■■□□□ 1.18
MAP1LC3B-206ENST00000564844 PAX7P23759 505 aa22.45■■□□□ 1.18
MAP1LC3B-206ENST00000564844 SCTRP47872 440 aa22.45■■□□□ 1.18
MAP1LC3B-206ENST00000564844 IFNAR2P48551 515 aa22.45■■□□□ 1.18
MAP1LC3B-206ENST00000564844 TNNI2P48788 182 aa22.45■■□□□ 1.18
MAP1LC3B-206ENST00000564844 C6orf89Q6UWU4 347 aa22.45■■□□□ 1.18
MAP1LC3B-206ENST00000564844 UNC13DQ70J99 1090 aa22.45■■□□□ 1.18
MAP1LC3B-206ENST00000564844 SLC18A3Q16572 532 aa22.45■■□□□ 1.18
MAP1LC3B-206ENST00000564844 ACCSLQ4AC99 568 aa22.45■■□□□ 1.18
MAP1LC3B-206ENST00000564844 ANKRD20A8PQ5CZ79 823 aa22.45■■□□□ 1.18
MAP1LC3B-206ENST00000564844 SPAG5Q96R06 1193 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms