RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 INVSQ9Y283 1065 aa6.86□□□□□ -1.31
CHD9-212ENST00000564641 LRG1P02750 347 aa6.85□□□□□ -1.31
CHD9-212ENST00000564641 IL13P35225 146 aa6.85□□□□□ -1.31
CHD9-212ENST00000564641 KRTAP10-2P60368 255 aa6.85□□□□□ -1.31
CHD9-212ENST00000564641 TBC1D10BQ4KMP7 808 aaPredicted RBP6.85□□□□□ -1.31
CHD9-212ENST00000564641 LBX2Q6XYB7 198 aa6.85□□□□□ -1.31
CHD9-212ENST00000564641 TRIM55Q9BYV6 548 aa6.85□□□□□ -1.31
CHD9-212ENST00000564641 PDGFDQ9GZP0 370 aaPredicted RBP6.85□□□□□ -1.31
CHD9-212ENST00000564641 FTSJ1Q9UET6 329 aa6.85□□□□□ -1.31
CHD9-212ENST00000564641 MYRFQ9Y2G1 1151 aa6.85□□□□□ -1.31
CHD9-212ENST00000564641 TRAV20A0A0B4J274 112 aa6.84□□□□□ -1.31
CHD9-212ENST00000564641 CHGBP05060 677 aa6.84□□□□□ -1.31
CHD9-212ENST00000564641 PABPC1P11940 636 aaKnown RBP6.84□□□□□ -1.31
CHD9-212ENST00000564641 GRK2P25098 689 aa6.84□□□□□ -1.31
CHD9-212ENST00000564641 GRK3P35626 688 aa6.84□□□□□ -1.31
CHD9-212ENST00000564641 NSMFQ6X4W1 530 aa6.84□□□□□ -1.31
CHD9-212ENST00000564641 OTOP3Q7RTS5 596 aa6.84□□□□□ -1.31
CHD9-212ENST00000564641 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.84□□□□□ -1.31
CHD9-212ENST00000564641 YTHDC1Q96MU7 727 aaKnown RBP6.84□□□□□ -1.31
CHD9-212ENST00000564641 KRTAP4-5Q9BYR2 181 aa6.84□□□□□ -1.31
CHD9-212ENST00000564641 ZNF536O15090 1300 aa6.83□□□□□ -1.32
CHD9-212ENST00000564641 U2SURPO15042 1029 aaKnown RBP6.83□□□□□ -1.32
CHD9-212ENST00000564641 PRODHO43272 600 aa6.83□□□□□ -1.32
CHD9-212ENST00000564641 STYK1Q6J9G0 422 aa6.83□□□□□ -1.32
CHD9-212ENST00000564641 GLB1LQ6UWU2 654 aa6.83□□□□□ -1.32
CHD9-212ENST00000564641 IFNL3Q8IZI9 196 aa6.83□□□□□ -1.32
CHD9-212ENST00000564641 PIP4K2CQ8TBX8 421 aa6.83□□□□□ -1.32
CHD9-212ENST00000564641 JAM3Q9BX67 310 aa6.83□□□□□ -1.32
CHD9-212ENST00000564641 ARHGEF4Q9NR80 690 aa6.83□□□□□ -1.32
CHD9-212ENST00000564641 MSCO60682 206 aa6.82□□□□□ -1.32
CHD9-212ENST00000564641 GNAT1P11488 350 aa6.82□□□□□ -1.32
CHD9-212ENST00000564641 RBM25P49756 843 aaKnown RBP6.82□□□□□ -1.32
CHD9-212ENST00000564641 GPR85P60893 370 aa6.82□□□□□ -1.32
CHD9-212ENST00000564641 IFRD2Q12894 506 aaPredicted RBP6.82□□□□□ -1.32
CHD9-212ENST00000564641 VASNQ6EMK4 673 aa6.82□□□□□ -1.32
CHD9-212ENST00000564641 GGNQ86UU5 652 aa6.82□□□□□ -1.32
CHD9-212ENST00000564641 CKAP2LQ8IYA6 745 aa6.82□□□□□ -1.32
CHD9-212ENST00000564641 UHMK1Q8TAS1 419 aaKnown RBP6.82□□□□□ -1.32
CHD9-212ENST00000564641 C1QTNF3Q9BXJ4 246 aa6.82□□□□□ -1.32
CHD9-212ENST00000564641 BARX1Q9HBU1 254 aaPredicted RBP6.82□□□□□ -1.32
CHD9-212ENST00000564641 DLL4Q9NR61 685 aa6.82□□□□□ -1.32
CHD9-212ENST00000564641 CROTQ9UKG9 612 aa6.82□□□□□ -1.32
CHD9-212ENST00000564641 FAM47E-STBD1D6RA91 191 aa6.81□□□□□ -1.32
CHD9-212ENST00000564641 LAMTOR5O43504 91 aa6.81□□□□□ -1.32
CHD9-212ENST00000564641 STK10O94804 968 aaKnown RBP6.81□□□□□ -1.32
CHD9-212ENST00000564641 MLLT6P55198 1093 aaPredicted RBP6.81□□□□□ -1.32
CHD9-212ENST00000564641 ZC3H6P61129 1189 aaKnown RBP6.81□□□□□ -1.32
CHD9-212ENST00000564641 CPZQ66K79 652 aa6.81□□□□□ -1.32
CHD9-212ENST00000564641 PKN3Q6P5Z2 889 aa6.81□□□□□ -1.32
CHD9-212ENST00000564641 KLHL36Q8N4N3 616 aa6.81□□□□□ -1.32
CHD9-212ENST00000564641 OSBP2Q969R2 916 aa6.81□□□□□ -1.32
CHD9-212ENST00000564641 ZNF428Q96B54 188 aa6.81□□□□□ -1.32
CHD9-212ENST00000564641 LOXL4Q96JB6 756 aa6.81□□□□□ -1.32
CHD9-212ENST00000564641 ZSWIM3Q96MP5 696 aa6.81□□□□□ -1.32
CHD9-212ENST00000564641 ALG1Q9BT22 464 aa6.81□□□□□ -1.32
CHD9-212ENST00000564641 IGSF5Q9NSI5 407 aa6.81□□□□□ -1.32
CHD9-212ENST00000564641 E9PSI1 815 aa6.8□□□□□ -1.32
CHD9-212ENST00000564641 SLC27A2O14975 620 aa6.8□□□□□ -1.32
CHD9-212ENST00000564641 B4GALT3O60512 393 aa6.8□□□□□ -1.32
CHD9-212ENST00000564641 ADAM17P78536 824 aa6.8□□□□□ -1.32
CHD9-212ENST00000564641 NBPF6Q5VWK0 638 aa6.8□□□□□ -1.32
CHD9-212ENST00000564641 TRMT10BQ6PF06 316 aaKnown RBP6.8□□□□□ -1.32
CHD9-212ENST00000564641 CHST13Q8NET6 341 aa6.8□□□□□ -1.32
CHD9-212ENST00000564641 NBPF4Q96M43 638 aa6.8□□□□□ -1.32
CHD9-212ENST00000564641 DSEQ9UL01 958 aa6.8□□□□□ -1.32
CHD9-212ENST00000564641 SOD2P04179 222 aa6.79□□□□□ -1.32
CHD9-212ENST00000564641 ENO2P09104 434 aaPredicted RBP6.79□□□□□ -1.32
CHD9-212ENST00000564641 FAHP16930 419 aa6.79□□□□□ -1.32
CHD9-212ENST00000564641 NAT1P18440 290 aa6.79□□□□□ -1.32
CHD9-212ENST00000564641 EPHA5P54756 1037 aa6.79□□□□□ -1.32
CHD9-212ENST00000564641 HABP4Q5JVS0 413 aaKnown RBP6.79□□□□□ -1.32
CHD9-212ENST00000564641 TMC5Q6UXY8 1006 aa6.79□□□□□ -1.32
CHD9-212ENST00000564641 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.79□□□□□ -1.32
CHD9-212ENST00000564641 SCUBE1Q8IWY4 988 aa6.79□□□□□ -1.32
CHD9-212ENST00000564641 DTX3Q8N9I9 347 aa6.79□□□□□ -1.32
CHD9-212ENST00000564641 CLEC4DQ8WXI8 215 aa6.79□□□□□ -1.32
CHD9-212ENST00000564641 MBD6Q96DN6 1003 aa6.79□□□□□ -1.32
CHD9-212ENST00000564641 IPO9Q96P70 1041 aaKnown RBP6.79□□□□□ -1.32
CHD9-212ENST00000564641 SPATA9Q9BWV2 254 aa6.79□□□□□ -1.32
CHD9-212ENST00000564641 MSRB2Q9Y3D2 182 aa6.79□□□□□ -1.32
CHD9-212ENST00000564641 C1QTNF3-AMACRE9PGA6 284 aa6.78□□□□□ -1.32
CHD9-212ENST00000564641 AQP7O14520 342 aa6.78□□□□□ -1.32
CHD9-212ENST00000564641 INSRRP14616 1297 aa6.78□□□□□ -1.32
CHD9-212ENST00000564641 PPP2CBP62714 309 aa6.78□□□□□ -1.32
CHD9-212ENST00000564641 PPP2CAP67775 309 aa6.78□□□□□ -1.32
CHD9-212ENST00000564641 NFATC3Q12968 1075 aa6.78□□□□□ -1.32
CHD9-212ENST00000564641 TUSC3Q13454 348 aa6.78□□□□□ -1.32
CHD9-212ENST00000564641 NTRK3Q16288 839 aa6.78□□□□□ -1.32
CHD9-212ENST00000564641 PAN2Q504Q3 1202 aaKnown RBP6.78□□□□□ -1.32
CHD9-212ENST00000564641 KCNT2Q6UVM3 1135 aa6.78□□□□□ -1.32
CHD9-212ENST00000564641 ARHGEF18Q6ZSZ5 1173 aa6.78□□□□□ -1.32
CHD9-212ENST00000564641 MAMDC2Q7Z304 686 aaPredicted RBP6.78□□□□□ -1.32
CHD9-212ENST00000564641 KBTBD2Q8IY47 623 aa6.78□□□□□ -1.32
CHD9-212ENST00000564641 ZCCHC14Q8WYQ9 949 aaKnown RBP6.78□□□□□ -1.32
CHD9-212ENST00000564641 SSBP3Q9BWW4 388 aaPredicted RBP6.78□□□□□ -1.32
CHD9-212ENST00000564641 PPARGC1AQ9UBK2 798 aaKnown RBP6.78□□□□□ -1.32
CHD9-212ENST00000564641 NPEPPSL1A6NEC2 478 aa6.77□□□□□ -1.33
CHD9-212ENST00000564641 PDPK1O15530 556 aa6.77□□□□□ -1.33
CHD9-212ENST00000564641 FBXO21O94952 628 aa6.77□□□□□ -1.33
CHD9-212ENST00000564641 EPHB4P54760 987 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms