RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 TRPV6Q9H1D0 765 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 HIPK3Q9H422 1215 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 TBX21Q9UL17 535 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 ZNF286BP0CG31 522 aa15.6■□□□□ 0.09
CNOT1-206ENST00000564557 XBP1P17861 261 aa15.6■□□□□ 0.09
CNOT1-206ENST00000564557 PSEN2P49810 448 aa15.6■□□□□ 0.09
CNOT1-206ENST00000564557 AK2P54819 239 aa15.6■□□□□ 0.09
CNOT1-206ENST00000564557 SP4Q02446 784 aa15.6■□□□□ 0.09
CNOT1-206ENST00000564557 PPIGQ13427 754 aaKnown RBP eCLIP15.6■□□□□ 0.094e-14■□□□□ 11.2
CNOT1-206ENST00000564557 MFSD5Q6N075 450 aa15.6■□□□□ 0.09
CNOT1-206ENST00000564557 UPF2Q9HAU5 1272 aaKnown RBP15.6■□□□□ 0.09
CNOT1-206ENST00000564557 JADE2Q9NQC1 790 aa15.6■□□□□ 0.09
CNOT1-206ENST00000564557 SH3GLB2Q9NR46 395 aa15.6■□□□□ 0.09
CNOT1-206ENST00000564557 TRMT13Q9NUP7 481 aaKnown RBP15.6■□□□□ 0.09
CNOT1-206ENST00000564557 TMEM260Q9NX78 707 aa15.6■□□□□ 0.09
CNOT1-206ENST00000564557 PKD2L1Q9P0L9 805 aa15.6■□□□□ 0.09
CNOT1-206ENST00000564557 VPS54Q9P1Q0 977 aa15.6■□□□□ 0.09
CNOT1-206ENST00000564557 UBIAD1Q9Y5Z9 338 aa15.6■□□□□ 0.09
CNOT1-206ENST00000564557 ITGB8P26012 769 aa15.59■□□□□ 0.09
CNOT1-206ENST00000564557 MFSD10Q14728 455 aa15.59■□□□□ 0.09
CNOT1-206ENST00000564557 KIAA0753Q2KHM9 967 aa15.59■□□□□ 0.09
CNOT1-206ENST00000564557 RETREG2Q8NC44 543 aa15.59■□□□□ 0.09
CNOT1-206ENST00000564557 MXRA8Q9BRK3 442 aa15.59■□□□□ 0.09
CNOT1-206ENST00000564557 SDF4Q9BRK5 362 aa15.59■□□□□ 0.09
CNOT1-206ENST00000564557 TPCN1Q9ULQ1 816 aa15.59■□□□□ 0.09
CNOT1-206ENST00000564557 PFKFB2O60825 505 aa15.58■□□□□ 0.08
CNOT1-206ENST00000564557 ITGB5P18084 799 aa15.58■□□□□ 0.08
CNOT1-206ENST00000564557 CYP2C18P33260 490 aa15.58■□□□□ 0.08
CNOT1-206ENST00000564557 SREBF1P36956 1147 aa15.58■□□□□ 0.08
CNOT1-206ENST00000564557 CLK2P49760 499 aaKnown RBP15.58■□□□□ 0.08
CNOT1-206ENST00000564557 FXR1P51114 621 aaKnown RBP eCLIP15.58■□□□□ 0.08
CNOT1-206ENST00000564557 ARHGAP4P98171 946 aa15.58■□□□□ 0.08
CNOT1-206ENST00000564557 SCRN1Q12765 414 aa15.58■□□□□ 0.08
CNOT1-206ENST00000564557 PTGISQ16647 500 aa15.58■□□□□ 0.08
CNOT1-206ENST00000564557 CEP55Q53EZ4 464 aa15.58■□□□□ 0.08
CNOT1-206ENST00000564557 UTP14CQ5TAP6 766 aaKnown RBP15.58■□□□□ 0.08
CNOT1-206ENST00000564557 CCDC155Q8N6L0 562 aa15.58■□□□□ 0.08
CNOT1-206ENST00000564557 PPP1R13LQ8WUF5 828 aa15.58■□□□□ 0.08
CNOT1-206ENST00000564557 WASF1Q92558 559 aa15.58■□□□□ 0.08
CNOT1-206ENST00000564557 ZNF215Q9UL58 517 aaPredicted RBP15.58■□□□□ 0.08
CNOT1-206ENST00000564557 TRIOBPQ9H2D6 2365 aa15.57■□□□□ 0.08
CNOT1-206ENST00000564557 H3BRB1 525 aa15.57■□□□□ 0.08
CNOT1-206ENST00000564557 F2P00734 622 aa15.57■□□□□ 0.08
CNOT1-206ENST00000564557 CYP2C9P11712 490 aa15.57■□□□□ 0.08
CNOT1-206ENST00000564557 CCL23P55773 120 aa15.57■□□□□ 0.08
CNOT1-206ENST00000564557 SEMA3FQ13275 785 aa15.57■□□□□ 0.08
CNOT1-206ENST00000564557 BFSP2Q13515 415 aa15.57■□□□□ 0.08
CNOT1-206ENST00000564557 C8orf34Q49A92 452 aa15.57■□□□□ 0.08
CNOT1-206ENST00000564557 RPUSD2Q8IZ73 545 aaKnown RBP15.57■□□□□ 0.08
CNOT1-206ENST00000564557 SPOCK2Q92563 424 aa15.57■□□□□ 0.08
CNOT1-206ENST00000564557 KAT2BQ92831 832 aa15.57■□□□□ 0.08
CNOT1-206ENST00000564557 IL17RAQ96F46 866 aa15.57■□□□□ 0.08
CNOT1-206ENST00000564557 GPR20Q99678 358 aa15.57■□□□□ 0.08
CNOT1-206ENST00000564557 C22orf23Q9BZE7 217 aa15.57■□□□□ 0.08
CNOT1-206ENST00000564557 TUT1Q9H6E5 874 aaKnown RBP15.57■□□□□ 0.08
CNOT1-206ENST00000564557 KCNH7Q9NS40 1196 aa15.57■□□□□ 0.08
CNOT1-206ENST00000564557 HDAC6Q9UBN7 1215 aa15.57■□□□□ 0.08
CNOT1-206ENST00000564557 SCN10AQ9Y5Y9 1956 aa15.56■□□□□ 0.08
CNOT1-206ENST00000564557 ATP9AO75110 1047 aa15.56■□□□□ 0.08
CNOT1-206ENST00000564557 LGALS2P05162 132 aa15.56■□□□□ 0.08
CNOT1-206ENST00000564557 HOXD8P13378 290 aaPredicted RBP15.56■□□□□ 0.08
CNOT1-206ENST00000564557 CSF2RAP15509 400 aa15.56■□□□□ 0.08
CNOT1-206ENST00000564557 SHHQ15465 462 aa15.56■□□□□ 0.08
CNOT1-206ENST00000564557 LRIT3Q3SXY7 679 aa15.56■□□□□ 0.08
CNOT1-206ENST00000564557 GALNT17Q6IS24 598 aa15.56■□□□□ 0.08
CNOT1-206ENST00000564557 SESTD1Q86VW0 696 aa15.56■□□□□ 0.08
CNOT1-206ENST00000564557 PLA2G4DQ86XP0 818 aa15.56■□□□□ 0.08
CNOT1-206ENST00000564557 FAM177A1Q8N128 213 aaPredicted RBP15.56■□□□□ 0.08
CNOT1-206ENST00000564557 SEPT1Q8WYJ6 367 aa15.56■□□□□ 0.08
CNOT1-206ENST00000564557 RNPC3Q96LT9 517 aaKnown RBP15.56■□□□□ 0.08
CNOT1-206ENST00000564557 NOC4LQ9BVI4 516 aaKnown RBP15.56■□□□□ 0.08
CNOT1-206ENST00000564557 BCAS3Q9H6U6 928 aa15.56■□□□□ 0.08
CNOT1-206ENST00000564557 GTF2IRD1Q9UHL9 959 aa15.56■□□□□ 0.08
CNOT1-206ENST00000564557 TCEAL9Q9UHQ7 104 aa15.56■□□□□ 0.08
CNOT1-206ENST00000564557 PCDHA4Q9UN74 947 aa15.56■□□□□ 0.08
CNOT1-206ENST00000564557 LTBP2Q14767 1821 aa15.56■□□□□ 0.08
CNOT1-206ENST00000564557 GNAT1P11488 350 aa15.55■□□□□ 0.08
CNOT1-206ENST00000564557 KCNA2P16389 499 aa15.55■□□□□ 0.08
CNOT1-206ENST00000564557 GDF6Q6KF10 455 aaPredicted RBP15.55■□□□□ 0.08
CNOT1-206ENST00000564557 PSRC1Q6PGN9 363 aaPredicted RBP15.55■□□□□ 0.08
CNOT1-206ENST00000564557 RASGRP4Q8TDF6 673 aa15.55■□□□□ 0.08
CNOT1-206ENST00000564557 GLG1Q92896 1179 aa15.55■□□□□ 0.08
CNOT1-206ENST00000564557 FAM212AQ96EL1 285 aa15.55■□□□□ 0.08
CNOT1-206ENST00000564557 C16orf70Q9BSU1 422 aa15.55■□□□□ 0.08
CNOT1-206ENST00000564557 MTIF3Q9H2K0 278 aaKnown RBP15.55■□□□□ 0.08
CNOT1-206ENST00000564557 JPH1Q9HDC5 661 aaPredicted RBP15.55■□□□□ 0.08
CNOT1-206ENST00000564557 ORC3Q9UBD5 711 aaPredicted RBP15.55■□□□□ 0.08
CNOT1-206ENST00000564557 SLC9A2Q9UBY0 812 aa15.55■□□□□ 0.08
CNOT1-206ENST00000564557 STK36Q9NRP7 1315 aa15.54■□□□□ 0.08
CNOT1-206ENST00000564557 DNAH12Q6ZR08 3092 aa15.54■□□□□ 0.08
CNOT1-206ENST00000564557 C17orf102A2RUQ5 167 aa15.54■□□□□ 0.08
CNOT1-206ENST00000564557 HAS3O00219 553 aa15.54■□□□□ 0.08
CNOT1-206ENST00000564557 MEIS1O00470 390 aa15.54■□□□□ 0.08
CNOT1-206ENST00000564557 CYP3A4P08684 503 aa15.54■□□□□ 0.08
CNOT1-206ENST00000564557 ARP10275 920 aa15.54■□□□□ 0.08
CNOT1-206ENST00000564557 TCF7P36402 384 aaPredicted RBP15.54■□□□□ 0.08
CNOT1-206ENST00000564557 SETQ01105 290 aaPredicted RBP15.54■□□□□ 0.08
CNOT1-206ENST00000564557 ME3Q16798 604 aa15.54■□□□□ 0.08
CNOT1-206ENST00000564557 C9orf50Q5SZB4 431 aa15.54■□□□□ 0.08
CNOT1-206ENST00000564557 NIPA1Q7RTP0 329 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms