RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 LOC102724159A0A0B4J2E5 919 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 MAN2B1O00754 1011 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 PCDHGA12O60330 932 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 MT-CO1P00395 513 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 PDE6AP16499 860 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 FSTP19883 344 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 RECQLP46063 649 aaPredicted RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 GPR3P46089 330 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 CORO7P57737 925 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 SPIRE1Q08AE8 756 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 PWP2Q15269 919 aaKnown RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 EMC4Q5J8M3 183 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 SLC51AQ86UW1 340 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 KIAA1958Q8N8K9 716 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 UHMK1Q8TAS1 419 aaKnown RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 LMBR1Q8WVP7 490 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 LINC01599Q8WXQ3 324 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 TMEM169Q96HH4 297 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 MAP6Q96JE9 813 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 JMJD8Q96S16 334 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 ELF4Q99607 663 aaPredicted RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 KCNJ15Q99712 375 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 PDGFDQ9GZP0 370 aaPredicted RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 ATP13A1Q9HD20 1204 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 IP6K2Q9UHH9 426 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 GIT1Q9Y2X7 761 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 PCDHGA9Q9Y5G4 932 aaKnown RBP3.41□□□□□ -1.86
CHD9-209ENST00000564255 PCDHGA8Q9Y5G5 932 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 PCDHGA7Q9Y5G6 932 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 PCDHGA6Q9Y5G7 932 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 PCDHGA3Q9Y5H0 932 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 PCDHGA2Q9Y5H1 932 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 B3GALT1Q9Y5Z6 326 aa3.41□□□□□ -1.86
CHD9-209ENST00000564255 GOLGA6CA6NDK9 693 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 GOLGA6BA6NDN3 693 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 BTBD11A6QL63 1104 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 NKRFO15226 690 aaKnown RBP eCLIP3.4□□□□□ -1.86
CHD9-209ENST00000564255 PEX14O75381 377 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 SNUPNO95149 360 aaKnown RBP3.4□□□□□ -1.86
CHD9-209ENST00000564255 CFBP00751 764 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 H2AFB1P0C5Y9 115 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 H2AFB2P0C5Z0 115 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 GOLGA6DP0CG33 693 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 VCAM1P19320 739 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 SDHAP31040 664 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 PRKCQQ04759 706 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 LRRC32Q14392 662 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 DDB1Q16531 1140 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 MORC4Q8TE76 937 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 TRMT2BQ96GJ1 504 aaKnown RBP3.4□□□□□ -1.86
CHD9-209ENST00000564255 CHAMP1Q96JM3 812 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 ORAI2Q96SN7 254 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 ZMAT4Q9H898 229 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 LRRC4CQ9HCJ2 640 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 C14orf119Q9NWQ9 140 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 GOLGA6AQ9NYA3 693 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.4□□□□□ -1.862e-7■■■■□ 23.5
CHD9-209ENST00000564255 ZC3H7BQ9UGR2 993 aaKnown RBP3.4□□□□□ -1.86
CHD9-209ENST00000564255 VAV3Q9UKW4 847 aa3.4□□□□□ -1.86
CHD9-209ENST00000564255 LUC7L2Q9Y383 392 aaKnown RBP3.4□□□□□ -1.86
CHD9-209ENST00000564255 A0A1W2PQ45 241 aaPredicted RBP3.4□□□□□ -1.87
CHD9-209ENST00000564255 A0A1W2PQY0 241 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 RNF225M0QZC1 329 aaPredicted RBP3.4□□□□□ -1.87
CHD9-209ENST00000564255 MYL1P05976 194 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 GNAT1P11488 350 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 LPOP22079 712 aaPredicted RBP3.4□□□□□ -1.87
CHD9-209ENST00000564255 FPR2P25090 351 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 RPL10P27635 214 aaKnown RBP3.4□□□□□ -1.87
CHD9-209ENST00000564255 EPHA5P54756 1037 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 ZNF174Q15697 407 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 FIGNQ5HY92 759 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 ARHGAP36Q6ZRI8 547 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 CEP68Q76N32 757 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 DGKHQ86XP1 1220 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 PTRH1Q86Y79 214 aaKnown RBP3.4□□□□□ -1.87
CHD9-209ENST00000564255 ZDHHC13Q8IUH4 622 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 FBXO41Q8TF61 875 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.4□□□□□ -1.87
CHD9-209ENST00000564255 ASIC4Q96FT7 647 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 HHIPL1Q96JK4 782 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 AIFM3Q96NN9 605 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 NUP88Q99567 741 aaPredicted RBP3.4□□□□□ -1.87
CHD9-209ENST00000564255 SLC6A20Q9NP91 592 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 TPSG1Q9NRR2 321 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 OBP2AQ9NY56 170 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 LMCD1Q9NZU5 365 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 SRPK3Q9UPE1 567 aa3.4□□□□□ -1.87
CHD9-209ENST00000564255 CYP26A1O43174 497 aa3.39□□□□□ -1.87
CHD9-209ENST00000564255 EIF3JO75822 258 aaKnown RBP3.39□□□□□ -1.87
CHD9-209ENST00000564255 KRT37O76014 449 aa3.39□□□□□ -1.87
CHD9-209ENST00000564255 KRT18P05783 430 aaKnown RBP3.39□□□□□ -1.87
CHD9-209ENST00000564255 COL6A2P12110 1019 aa3.39□□□□□ -1.87
CHD9-209ENST00000564255 SLC9A1P19634 815 aa3.39□□□□□ -1.87
CHD9-209ENST00000564255 IRF9Q00978 393 aa3.39□□□□□ -1.87
CHD9-209ENST00000564255 NLGN4XQ8N0W4 816 aa3.39□□□□□ -1.87
CHD9-209ENST00000564255 ASB11Q8WXH4 323 aa3.39□□□□□ -1.87
CHD9-209ENST00000564255 HRASLS5Q96KN8 279 aa3.39□□□□□ -1.87
CHD9-209ENST00000564255 KRTAP9-8Q9BYQ0 159 aa3.39□□□□□ -1.87
CHD9-209ENST00000564255 GULP1Q9UBP9 304 aa3.39□□□□□ -1.87
CHD9-209ENST00000564255 EBF1Q9UH73 591 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms