RNA–Protein interactions for RNA: ENST00000563517.5

TUBGCP4-206, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 5

Gene TUBGCP4, Length 771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-206ENST00000563517 TFIP11Q9UBB9 837 aaKnown RBP20.31■□□□□ 0.84
TUBGCP4-206ENST00000563517 Q9Y3F1 56 aa20.31■□□□□ 0.84
TUBGCP4-206ENST00000563517 CLIC4Q9Y696 253 aa20.31■□□□□ 0.84
TUBGCP4-206ENST00000563517 NFASCO94856 1347 aa20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 DYNC1LI2O43237 492 aaPredicted RBP20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 SORBS3O60504 671 aa20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 NCLP19338 710 aaKnown RBP20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 DNM1Q05193 864 aaKnown RBP20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 ITGB3BPQ13352 177 aaPredicted RBP20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 LAMC2Q13753 1193 aa20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 MTFR1Q15390 333 aa20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 TMEM63BQ5T3F8 832 aa20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 GJC2Q5T442 439 aaPredicted RBP20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 METTL7BQ6UX53 244 aa20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 CYFIP1Q7L576 1253 aa20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 COPS5Q92905 334 aa20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 MTMR9Q96QG7 549 aa20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 TEKT3Q9BXF9 490 aa20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 TMEM60Q9H2L4 133 aa20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 POLR3EQ9NVU0 708 aa20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 GNEQ9Y223 722 aaKnown RBP20.3■□□□□ 0.84
TUBGCP4-206ENST00000563517 DDX39AO00148 427 aaKnown RBP20.29■□□□□ 0.84
TUBGCP4-206ENST00000563517 TXKP42681 527 aa20.29■□□□□ 0.84
TUBGCP4-206ENST00000563517 KRT85P78386 507 aa20.29■□□□□ 0.84
TUBGCP4-206ENST00000563517 STK38Q15208 465 aa20.29■□□□□ 0.84
TUBGCP4-206ENST00000563517 TLK2Q86UE8 772 aa20.29■□□□□ 0.84
TUBGCP4-206ENST00000563517 C4orf32Q8N8J7 132 aa20.29■□□□□ 0.84
TUBGCP4-206ENST00000563517 HAS1Q92839 578 aa20.29■□□□□ 0.84
TUBGCP4-206ENST00000563517 LENG1Q96BZ8 264 aaPredicted RBP20.29■□□□□ 0.84
TUBGCP4-206ENST00000563517 FTOQ9C0B1 505 aaKnown RBP eCLIP20.29■□□□□ 0.84
TUBGCP4-206ENST00000563517 JPH1Q9HDC5 661 aaPredicted RBP20.29■□□□□ 0.84
TUBGCP4-206ENST00000563517 PCDHA12Q9UN75 941 aa20.29■□□□□ 0.84
TUBGCP4-206ENST00000563517 NOP56O00567 594 aaKnown RBP20.28■□□□□ 0.84
TUBGCP4-206ENST00000563517 ADCY6O43306 1168 aa20.28■□□□□ 0.84
TUBGCP4-206ENST00000563517 CAPN15O75808 1086 aa20.28■□□□□ 0.84
TUBGCP4-206ENST00000563517 ATP2C1P98194 919 aaPredicted RBP20.28■□□□□ 0.84
TUBGCP4-206ENST00000563517 SP4Q02446 784 aa20.28■□□□□ 0.84
TUBGCP4-206ENST00000563517 ARHGAP1Q07960 439 aa20.28■□□□□ 0.84
TUBGCP4-206ENST00000563517 TMEM266Q2M3C6 531 aa20.28■□□□□ 0.84
TUBGCP4-206ENST00000563517 BRDTQ58F21 947 aaPredicted RBP20.28■□□□□ 0.84
TUBGCP4-206ENST00000563517 GJA10Q969M2 543 aa20.28■□□□□ 0.84
TUBGCP4-206ENST00000563517 SPATA33Q96N06 139 aa20.28■□□□□ 0.84
TUBGCP4-206ENST00000563517 XPNPEP3Q9NQH7 507 aa20.28■□□□□ 0.84
TUBGCP4-206ENST00000563517 SLC9A2Q9UBY0 812 aa20.28■□□□□ 0.84
TUBGCP4-206ENST00000563517 HTTP42858 3142 aa20.28■□□□□ 0.84
TUBGCP4-206ENST00000563517 DHX15O43143 795 aaKnown RBP20.27■□□□□ 0.84
TUBGCP4-206ENST00000563517 PSMD10O75832 226 aa20.27■□□□□ 0.84
TUBGCP4-206ENST00000563517 FARP2O94887 1054 aaPredicted RBP20.27■□□□□ 0.84
TUBGCP4-206ENST00000563517 YEATS4O95619 227 aa20.27■□□□□ 0.84
TUBGCP4-206ENST00000563517 PRPHP41219 470 aa20.27■□□□□ 0.84
TUBGCP4-206ENST00000563517 NASPP49321 788 aaPredicted RBP20.27■□□□□ 0.84
TUBGCP4-206ENST00000563517 KRT76Q01546 638 aa20.27■□□□□ 0.84
TUBGCP4-206ENST00000563517 ARL6IP4Q66PJ3 421 aaKnown RBP20.27■□□□□ 0.84
TUBGCP4-206ENST00000563517 DTHD1Q6ZMT9 781 aa20.27■□□□□ 0.84
TUBGCP4-206ENST00000563517 EMID1Q96A84 441 aaPredicted RBP20.27■□□□□ 0.84
TUBGCP4-206ENST00000563517 DEFB118Q96PH6 123 aa20.27■□□□□ 0.84
TUBGCP4-206ENST00000563517 TTC12Q9H892 705 aaPredicted RBP20.27■□□□□ 0.84
TUBGCP4-206ENST00000563517 PAK6Q9NQU5 681 aaPredicted RBP20.27■□□□□ 0.84
TUBGCP4-206ENST00000563517 MYCNP04198 464 aaPredicted RBP20.26■□□□□ 0.83
TUBGCP4-206ENST00000563517 PTGS1P23219 599 aa20.26■□□□□ 0.83
TUBGCP4-206ENST00000563517 CPT1AP50416 773 aa20.26■□□□□ 0.83
TUBGCP4-206ENST00000563517 GJA9P57773 515 aa20.26■□□□□ 0.83
TUBGCP4-206ENST00000563517 SLC39A14Q15043 492 aa20.26■□□□□ 0.83
TUBGCP4-206ENST00000563517 PTPAQ15257 358 aa20.26■□□□□ 0.83
TUBGCP4-206ENST00000563517 ZNF746Q6NUN9 644 aaPredicted RBP20.26■□□□□ 0.83
TUBGCP4-206ENST00000563517 PPTC7Q8NI37 304 aa20.26■□□□□ 0.83
TUBGCP4-206ENST00000563517 AFG1LQ8WV93 481 aa20.26■□□□□ 0.83
TUBGCP4-206ENST00000563517 TMEM106CQ9BVX2 250 aa20.26■□□□□ 0.83
TUBGCP4-206ENST00000563517 RAB34Q9BZG1 259 aa20.26■□□□□ 0.83
TUBGCP4-206ENST00000563517 BCAS3Q9H6U6 928 aa20.26■□□□□ 0.83
TUBGCP4-206ENST00000563517 CHMP2AO43633 222 aa20.25■□□□□ 0.83
TUBGCP4-206ENST00000563517 ZEB2O60315 1214 aa20.25■□□□□ 0.83
TUBGCP4-206ENST00000563517 PGK1P00558 417 aa20.25■□□□□ 0.83
TUBGCP4-206ENST00000563517 C6orf222P0C671 652 aaPredicted RBP20.25■□□□□ 0.83
TUBGCP4-206ENST00000563517 TECP42680 631 aa20.25■□□□□ 0.83
TUBGCP4-206ENST00000563517 LHX8Q68G74 356 aa20.25■□□□□ 0.83
TUBGCP4-206ENST00000563517 RNF180Q86T96 592 aa20.25■□□□□ 0.83
TUBGCP4-206ENST00000563517 LINC00301Q8NCQ3 95 aa20.25■□□□□ 0.83
TUBGCP4-206ENST00000563517 KCNG4Q8TDN1 519 aa20.25■□□□□ 0.83
TUBGCP4-206ENST00000563517 SCAND2PQ9GZW5 306 aaPredicted RBP20.25■□□□□ 0.83
TUBGCP4-206ENST00000563517 UPF3AQ9H1J1 476 aaKnown RBP20.25■□□□□ 0.83
TUBGCP4-206ENST00000563517 UNC45AQ9H3U1 944 aa20.25■□□□□ 0.83
TUBGCP4-206ENST00000563517 SAMM50Q9Y512 469 aa20.25■□□□□ 0.83
TUBGCP4-206ENST00000563517 SYNRGQ9UMZ2 1314 aa20.25■□□□□ 0.83
TUBGCP4-206ENST00000563517 WDR64B1ANS9 1081 aa20.24■□□□□ 0.83
TUBGCP4-206ENST00000563517 SPTLC2O15270 562 aa20.24■□□□□ 0.83
TUBGCP4-206ENST00000563517 GJB1P08034 283 aa20.24■□□□□ 0.83
TUBGCP4-206ENST00000563517 MARCKSP29966 332 aaPredicted RBP20.24■□□□□ 0.83
TUBGCP4-206ENST00000563517 SFNP31947 248 aa20.24■□□□□ 0.83
TUBGCP4-206ENST00000563517 JAK3P52333 1124 aa20.24■□□□□ 0.83
TUBGCP4-206ENST00000563517 ACTR2P61160 394 aa20.24■□□□□ 0.83
TUBGCP4-206ENST00000563517 PPP2R5CQ13362 524 aa20.24■□□□□ 0.83
TUBGCP4-206ENST00000563517 FSCN1Q16658 493 aaKnown RBP20.24■□□□□ 0.83
TUBGCP4-206ENST00000563517 HSDL1Q3SXM5 330 aa20.24■□□□□ 0.83
TUBGCP4-206ENST00000563517 NCAPH2Q6IBW4 605 aa20.24■□□□□ 0.83
TUBGCP4-206ENST00000563517 SMAP1Q8IYB5 467 aaPredicted RBP20.24■□□□□ 0.83
TUBGCP4-206ENST00000563517 ARRDC4Q8NCT1 418 aa20.24■□□□□ 0.83
TUBGCP4-206ENST00000563517 SEPT1Q8WYJ6 367 aa20.24■□□□□ 0.83
TUBGCP4-206ENST00000563517 TNPO1Q92973 898 aaKnown RBP20.24■□□□□ 0.83
TUBGCP4-206ENST00000563517 FERMT2Q96AC1 680 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms